SelenoDB
Release 2.0
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Gene Report for SPG00000004_2.0
Identity
GeneGlutathione peroxidase 1 (GPx1)
SpeciesHomo sapiens (Human)
DescriptionGlutathione peroxidase functions in the detoxification of hydrogen peroxide, and is one of the most important antioxidant enzymes in humans. Express in the cytosol. (NCBI)
FamilyGlutathione peroxidase
SynonymsNone
Subfamily Glutathione peroxidase 1 (GPx1)
Synonyms Cellular glutathione peroxidase (cGPx)
Gene IDSPG00000004
Gene release2.0
External ID ENSG00000233276.2 (Ensembl)
Annotation
Prediction method(s)
Promoter prediction (5000bp upstream, N/A) [Report annotation error]
Curated external database annotation (GENCODE, 15) [Report annotation error]
Thermodynamic pattern-based SECIS prediction (SECISearch, 3.0) [Report annotation error]
Conceptual translation (Translate, Standard code with Sec) [Report annotation error]
OrientationReverse
Structure gene structure

FeatureCol PromoterCol Coding exonCol Non coding exon (UTR)Col IntronCol SECIS
ResidueCol SecCol Cys or Other

Gene
Transcript(s) Promoter(s) Protein(s) Secis
SPT00000017_2.0SPR00000021_2.0SPP00000017_2.0SPS00000006_2.0
SPT00000018_2.0SPR00000022_2.0SPP00000018_2.0SPS00000007_2.0
Genetic
Differentiation
FST
AfricaMiddle EastEuropeCentral-South AsiaEast AsiaOceaniaAmerica
Africa0.332
Middle East0.7080.689
Europe0.6180.5900.507
Central-South Asia0.6390.6540.5790.631
East Asia0.6130.5710.5660.5910.543
Oceania0.6170.5120.4860.5750.5940.022
America0.4890.3560.3340.4080.3190.3660.822

High FST

Low FST

P-value
AfricaMiddle EastEuropeCentral-South AsiaEast AsiaOceaniaAmerica
Africa0.322
Middle East0.0060.040
Europe0.0000.0000.002
Central-South Asia0.0000.0000.0000.000
East Asia0.0000.0000.0000.0000.000
Oceania0.0000.0110.0050.0000.0000.750
America0.0010.0090.0370.0000.0020.3250.000

Low P-value

High P-value

Sequence
Sequence SEQ00000004_2.0
External ID ENSG00000233276.2 (Ensembl)
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