SelenoDB
Release 2.0
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Gene Report for SPG00000006_2.0
Identity
GeneGlutathione peroxidase 3 (GPx3)
SpeciesHomo sapiens (Human)
DescriptionGlutathione peroxidase functions in the detoxification of hydrogen peroxide, and is one of the most important antioxidant enzymes in humans. Secreted to the plasma. (NCBI)
FamilyGlutathione peroxidase
SynonymsNone
Subfamily Glutathione peroxidase 3 (GPx3)
Synonyms Plasma glutathione peroxidase (pGPx)
Gene IDSPG00000006
Gene release2.0
External ID ENSG00000211445.6 (Ensembl)
Annotation
Prediction method(s)
Promoter prediction (5000bp upstream, N/A) [Report annotation error]
Curated external database annotation (GENCODE, 15) [Report annotation error]
Thermodynamic pattern-based SECIS prediction (SECISearch, 3.0) [Report annotation error]
Conceptual translation (Translate, Standard code with Sec) [Report annotation error]
OrientationForward
Structure gene structure

FeatureCol PromoterCol Coding exonCol Non coding exon (UTR)Col IntronCol SECIS
ResidueCol SecCol Cys or Other

Gene
Transcript(s) Promoter(s) Protein(s) Secis
SPT00000021_2.0SPR00000027_2.0SPP00000021_2.0SPS00000009_2.0
SPT00000024_2.0SPR00000030_2.0SPP00000024_2.0SPS00000010_2.0
SPT00000022_2.0SPR00000028_2.0SPP00000022_2.0N/A
SPT00000023_2.0SPR00000029_2.0SPP00000023_2.0N/A
Genetic
Differentiation
FST
AfricaMiddle EastEuropeCentral-South AsiaEast AsiaOceaniaAmerica
Africa0.262
Middle East0.4050.226
Europe0.4350.2500.222
Central-South Asia0.4150.3450.3370.413
East Asia0.4440.3570.3930.3560.285
Oceania0.5500.4810.5250.4780.4160.221
America0.4740.2590.2900.2820.2610.3720.402

High FST

Low FST

P-value
AfricaMiddle EastEuropeCentral-South AsiaEast AsiaOceaniaAmerica
Africa0.690
Middle East0.9890.630
Europe0.6210.8810.569
Central-South Asia0.8370.4150.0710.029
East Asia0.0000.0000.0000.0000.000
Oceania0.0080.0150.0040.0030.0950.417
America0.0020.0340.0260.0010.0070.3030.090

Low P-value

High P-value

Sequence
Sequence SEQ00000006_2.0
External ID ENSG00000211445.6 (Ensembl)
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