SelenoDB
Release 2.0
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Gene Report for SPG00000021_2.0
Identity
GeneSelenoprotein K (SelK)
SpeciesHomo sapiens (Human)
DescriptionThis selenoprotein is localized to the endoplasmic reticulum and is highly expressed in the heart, where it may function as an antioxidant. (NCBI)
FamilySelenoprotein K
Synonyms Glycine-rich selenoprotein (G-rich)
Selenoprotein G (SelG)
Selenoprotein K (SEPK)
SubfamilyNone
SynonymsNone
Gene IDSPG00000021
Gene release2.0
External ID ENSG00000113811.6 (Ensembl)
Annotation
Prediction method(s)
Promoter prediction (5000bp upstream, N/A) [Report annotation error]
Curated external database annotation (GENCODE, 15) [Report annotation error]
Thermodynamic pattern-based SECIS prediction (SECISearch, 3.0) [Report annotation error]
Conceptual translation (Translate, Standard code with Sec) [Report annotation error]
OrientationForward (Reverse in the original sequence)
Structure gene structure

FeatureCol PromoterCol Coding exonCol Non coding exon (UTR)Col IntronCol SECIS
ResidueCol SecCol Cys or Other

Gene
Transcript(s) Promoter(s) Protein(s) Secis
SPT00000070_2.0SPR00000091_2.0SPP00000076_2.0SPS00000020_2.0
Genetic
Differentiation
FST
AfricaMiddle EastEuropeCentral-South AsiaEast AsiaOceaniaAmerica
Africa0.231
Middle East0.3890.344
Europe0.3000.2410.166
Central-South Asia0.2750.2740.2180.186
East Asia0.2930.2840.3510.2120.246
Oceania0.3250.2400.3120.2170.3850.414
America0.2400.2200.2970.1710.2150.2170.239

High FST

Low FST

P-value
AfricaMiddle EastEuropeCentral-South AsiaEast AsiaOceaniaAmerica
Africa0.802
Middle East0.9950.567
Europe0.9990.6810.687
Central-South Asia1.0000.8480.5840.754
East Asia0.8860.0060.0000.0150.000
Oceania0.6290.3960.4000.6840.2160.292
America0.9610.1190.0120.2410.1040.7510.454

Low P-value

High P-value

Sequence
Sequence SEQ00000021_2.0
External ID ENSG00000113811.6 (Ensembl)
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