SelenoDB
Release 2.0
Chart Advanced
Gene Report for SPG00000025_2.0
Identity
GeneSelenoprotein P (SelP)
SpeciesHomo sapiens (Human)
DescriptionThis selenoprotein is an extracellular glycoprotein, and is unusual in that it contains multiple Sec residues per polypeptide. It is a heparin-binding protein that appears to be associated with endothelial cells, and has been implicated to function as an antioxidant in the extracellular space and it is involved in Se transport to different organs and tissues. (NCBI)
FamilySelenoprotein P
Synonyms Selenoprotein P (SEPP)
SubfamilyNone
SynonymsNone
Gene IDSPG00000025
Gene release2.0
External ID ENSG00000250722.1 (Ensembl)
Annotation
Prediction method(s)
Promoter prediction (5000bp upstream, N/A) [Report annotation error]
Curated external database annotation (GENCODE, 15) [Report annotation error]
Thermodynamic pattern-based SECIS prediction (SECISearch, 3.0) [Report annotation error]
Conceptual translation (Translate, Standard code with Sec) [Report annotation error]
OrientationReverse
Structure gene structure

FeatureCol PromoterCol Coding exonCol Non coding exon (UTR)Col IntronCol SECIS
ResidueCol SecCol Cys or Other

Gene
Transcript(s) Promoter(s) Protein(s) Secis
SPT00000076_2.0SPR00000101_2.0SPP00000082_2.0SPS00000026_2.0
SPS00000027_2.0
SPT00000077_2.0SPR00000102_2.0SPP00000083_2.0SPS00000028_2.0
SPT00000078_2.0SPR00000103_2.0SPP00000084_2.0SPS00000029_2.0
SPT00000079_2.0SPR00000104_2.0SPP00000085_2.0N/A
SPT00000080_2.0SPR00000105_2.0SPP00000086_2.0N/A
Genetic
Differentiation
FST
AfricaMiddle EastEuropeCentral-South AsiaEast AsiaOceaniaAmerica
Africa0.507
Middle East0.6930.608
Europe0.6160.5450.430
Central-South Asia0.6200.6200.5030.560
East Asia0.5330.5460.5080.4940.318
Oceania0.5690.5770.5500.5380.3970.696
America0.4850.4720.3990.4720.4030.3870.405

High FST

Low FST

P-value
AfricaMiddle EastEuropeCentral-South AsiaEast AsiaOceaniaAmerica
Africa0.001
Middle East0.0100.125
Europe0.0000.0090.027
Central-South Asia0.0000.0000.0000.000
East Asia0.0000.0000.0000.0000.000
Oceania0.0030.0050.0050.0000.0750.167
America0.0000.0000.0000.0000.0000.2600.106

Low P-value

High P-value

Sequence
Sequence SEQ00000025_2.0
External ID ENSG00000250722.1 (Ensembl)
Chart Advanced

© 2007-2024 SelenoDB
- A public source of selenium -