SelenoDB
Release 2.0
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Gene Report for SPG00000030_2.0
Identity
GeneSelenoprotein T (SelT)
SpeciesHomo sapiens (Human)
DescriptionUnknown function. (NCBI)
FamilySelenoprotein T
Synonyms Selenoprotein T (SEPT)
SubfamilyNone
SynonymsNone
Gene IDSPG00000030
Gene release2.0
External ID ENSG00000198843.8 (Ensembl)
Annotation
Prediction method(s)
Promoter prediction (5000bp upstream, N/A) [Report annotation error]
Curated external database annotation (GENCODE, 15) [Report annotation error]
Thermodynamic pattern-based SECIS prediction (SECISearch, 3.0) [Report annotation error]
Conceptual translation (Translate, Standard code with Sec) [Report annotation error]
OrientationForward
Structure gene structure

FeatureCol PromoterCol Coding exonCol Non coding exon (UTR)Col IntronCol SECIS
ResidueCol SecCol Cys or Other

Gene
Transcript(s) Promoter(s) Protein(s) Secis
SPT00000100_2.0SPR00000130_2.0SPP00000106_2.0SPS00000035_2.0
SPT00000099_2.0SPR00000129_2.0SPP00000105_2.0SPS00000034_2.0
SPT00000101_2.0SPR00000131_2.0SPP00000107_2.0SPS00000036_2.0
SPT00000102_2.0SPR00000132_2.0SPP00000108_2.0SPS00000037_2.0
Genetic
Differentiation
FST
AfricaMiddle EastEuropeCentral-South AsiaEast AsiaOceaniaAmerica
Africa0.412
Middle East0.6650.461
Europe0.5800.4190.333
Central-South Asia0.5960.4550.3990.420
East Asia0.5960.4990.4530.4730.366
Oceania0.7150.6390.6130.6520.5890.598
America0.4490.2320.2500.2760.2020.3760.236

High FST

Low FST

P-value
AfricaMiddle EastEuropeCentral-South AsiaEast AsiaOceaniaAmerica
Africa0.012
Middle East0.0540.354
Europe0.0010.0670.148
Central-South Asia0.0000.0440.0220.009
East Asia0.0000.0000.0000.0000.000
Oceania0.0000.0010.0000.0000.0000.167
America0.0170.2070.4040.0970.5590.3110.415

Low P-value

High P-value

Sequence
Sequence SEQ00000030_2.0
External ID ENSG00000198843.8 (Ensembl)
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