SelenoDB
Release 2.0
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Promoter Report for SPR00000345_2.0
Identity
PromoterSelenocysteine synthase (SecS)
SpeciesCaenorhabditis elegans (Worm)
Promoter IDSPR00000345
Promoter release2.0
External IDNone
Transcript SPT00000290_2.0
Annotation
Prediction method(s)
Promoter prediction (5000bp upstream, N/A) [Report annotation error]
OrientationReverse
Structure gene structure

FeatureCol PromoterCol Coding exonCol Non coding exon (UTR)Col IntronCol SECIS
ResidueCol SecCol Cys or Other

ToolboxForward   Reverse    
Sequence
>SPR00000345_2.0 # Promoter # Selenocysteine synthase (SecS) # Worm (Caenorhabditis elegans) Full length # Reverse
TGTCCTCACTTCTTGCAGTTCTTCCACTGACACAGTCATCGACACTGAAAATTAATGAAT
GGGAATTTCAATTTTTAACCTTGAAAAAAAAAACAACTATTGAACTAAATACTAAACTAT
TGACTTGTTTGAGCATCTTTCTGGCTACACATACGACATTAAATTCCAAAAGTCATACAT
TTCCAGATTTTTATTGGACTTCTTACCGAGACTGGCAATCTACGCAAAGAGGAAGACACG
CGCATTCTGTATGCCCGGGAAGATTCATCAGAAGTTTTTCGAATGACATTGAATGAAAAT
TTTGAGCAAGTAAATAAGAGCTTTTTTAGAAGGTGGGAAGAAGTGAACTTTTGCCCACTT
CCGATTGGTCCTCATTTTTTCTTGCTTTGCAGTTTCGGACAAAAGAGAAAAGTGCACCTT
ACATGACGTTTTAATTCTTCGCTTTTTTTTTGGAAAGTGGGTGACAAGTCGATGTGTTTG
GTGCTTAGAAATATAAAATATGGCGGGTTACAATTTCTTGGCAAAAAAAAATGTGTTCAA
TTATTAGGATTCATTGTCGGAATAAAAGAGAATGTATCCTTTTCTGGACGAAAAATGTGA
ATGAAATAAATAAAATTAATACTTAGAACGAGGCTCGAATATTGAGAAAAACAGATTTAT
CGCTCGAGTGGAGCCAATCCCAATTTGGCACGGAGTGCATTCGCTTCTGCGATTTCGCGT
TCTTCATCGTTGTCTGCACCACCTCGACGAGATTCTTTTTTCTTATCACGACGATCATCA
TCTGCAAATATAAATTATTCATGACATGGTACCTTTAAAAACATACATTGACAACATAAT
TTTTTCTGGTTAATCTAAATGAACATGCTTGACTATATCTATAAAACCAAAATAAAATCT
GGGATTATTCAGATTTCCGTGAAGTTTTTATCAGAAAACCATAGAATGTTTGATTAAAAA
TATTACCTCTTCTATCTCGACGATCTCTATCCCGGCTTCTATCACGATCTCTTCTTCTGT
CATCTCTATCATCACGTCTACCACTACCACTACTGCTTGGCCCTGGCTCATCGTCTCCTC
TTTCTCTTCGTTCTTTCAGTTTTTCTCGTTCACGAACTTCTCGTCGATCACCAACATCTC
TTTCGCGATCTCTGCTTCGACTACGTCTTCTAGATGTCAAACGTGGCTTCTCCTTCTTTG
TGACTTCTTCCTCTTCAGAATCAGAATCACTCATTGCAACAAGATCACCATCAAGAAGTG
ACTTATATGACGGAAGCATGTCTACTTCTTCAAGAGCCCATCTCTTCTGTAGACGAGGAA
GTTGAATGTCACAATAGCGATCTTCACGAAGTAAATTGTCGATGAAATCGTCCATGTAGA
TAGCTTCGAATCGACCCATCTTATTCATATATCTTAATTTACGAAAATCATTATATAATG
GTTCGAGATACTTGTAAATTTCGGTTGAATCAAATGTAAGTCGAAGATACATTGCTCCTA
GAGCTCTGATATACTTGAATTCCTCTTGTTGAATGAATTCAAGAACGATATCCTTGTCCG
GCTGAATTTGTAGCATCTTGAGAGCGAGGCACAAAAAAGGAGTTGGTTTGATGTTTCCTG
CGTAGATACCTCCGATGTATCGAAGATCCATTCCCTTGTCCACGACCAGTTCAGCTAAAA
AAATAATGTTAAATTAGTGAATAGCAAAGAACAACTTACCTGTGAGCGCAAAACAGTGCT
CTTTCCAGTACATGCTGTCATAAATACGCTGCCGGATGATTTTTTCGACGAGAAACTGGG
GATTTGTACCTTTGACGGTTTTCGCCGCTTTCTCTGTGCGGTTTGCCATCTGAATTTTTA
ATTTATAAACAATAGAAGTATTAACGGTGGAAAGATATCGAAACCGTTATGTACGGTCAT
AGTATTGTTGCATCTGAGAAATGTTGAGAATATATTTTTTATTTTTCAGGTGTAAGTTAA
CAGATAAATAGAAACACAGGTAAAAAATATTTTAGTACGCCTTCTTTTTGACAATTTCTG
GTCGCCAAACAATTGGATGGCTTTCCTCTGTCTGAAAAAAAAATTTTAATGTAAAATATA
TTTTTCCAAAACTAACTGCTTCATCATCTTCCTTGTACATTTTGATTGTCTTGTCAGCTT
CAGCGGTAATAAGCCTGAGACCTGTCTTGTCGAAGCACGAAGCGTAGATCCCAGCTTCAG
ATTCTATTGATCCTGGTTGAGGCTTTGTTTGAATTTTCTGGAAGCAGAAACCAGATCTCC
AATCCCAGAAGCACAACGATCCGTTGTCAGCGCCTGATACAACAACACCATCATCATTGG
AAGACAGTGTATTGATAATAGCATTATGTCCAGAAAGATTCTGCATAAATTCTCCTTTGG
GAAGTTTCCACTGTTTGATGTTATCTGGGGAAGCAGAAGCAAACATGTTGAGACGTGGAT
GAATTGTCAGAGCTCTCACTGATTTCTTGTGATGAGTTAATGTGCACATAGAACGTCCAG
CGGCCAAATCCCATAGACGAACTGTCGCATCATGAGAAGCAGTTATTACTTGTGGATCAA
CTGATTGACACACAACATCTGCGACGGTGTTTGTGTGACCAGCAAAACAATGGACTTGAG
CTTTTGTTCTCATATCCCAAACTCTAGCTGTAGAATCACGAGCGCAGGTGACTAGAACAT
CAAGAGATGGATGTACTGAAAGAGCTTGGACGGCACTTAAATGCCCATGATAATGACGGA
TCACTTTGTTGTATTCCAAATCCCAGCATTTAACCTAAAAACACATTTTGGAAGTTCAGA
TCACTAATTAGAGACAAATTATCTTACCTGTTTATCTTCTCCTCCACTGAACAAGAAAGG
ATGCCTTGGTGAAACTTTTACAGCTCTTACAGAACTGATGTGACCAGTCAATGATAACTT
CAACTGTCCAGACGCTAAGTCCCAAATCTTGATAATACGGTCCGCTCCGCCAGAAGCAAA
CCATTGATTTCCCGGTTCAACATCAACTGCTCTGACCCATCCTGTATGTCCCGAAGCTAC
ACGATACAATTTCCATGGAGCGTGCCATTTTGGTTTCATCATCATAGGCGCCTTTGAAGG
AAGAAGCGATCGAGTTGTATTGTCTTCTCCTTTTGAACTGTTACCAAGTGGAACCAAAGG
AAGCAGTGTTCCACTTTTTGCTGATCCTTGTTGCTGATTAACAAGTTTTCCTGATCCATC
TGTGATAGCCAATGGGGTTCCAGCTGATGCGATCACTGATCCTGTACCGTGCATCGGTTG
CGATGTTGGGAGAGCGAGCATTTCATTTTCTCGTCTCACTTTCATTTCTTCTACTTTTTT
AATAACATTACCGTACTCGTGCTTTCTTTTCATTGACCGAATTAGACTGTCACTGAAATT
ATTTTTGTAGATTTAAGCTTTTTTAAGTTATCAAGGAAAACAATTTGAAAATGTGGAACT
TACTTCTCTTCTGGCATTGGAGGTGGCTGTGCATAATCGTGATAAAATAAATCCTGTGCC
CTTTTCAACGATTTAAAAACTTGATTGAGTAATGCTTTTTTGTCGGCTTCCGGTTTGTCC
TCTGAATTAAGAATTTATTATTTAATTATTTTAACTACCAACAAACCGAGATCATCATCT
GTTGGAGCAGCTGGCATTTGTTCATACGGATCGGAAACGCTTGCAGACATGTTTCTTTAA
AACAAGACTATTAGAGTGGCTCAAGACTATCTTTTTGGAAGAAAAATAGGAAAAGTACAG
AGTGAATAAATTATTCTGCTTTTAAAGGAAACTGGAGAAACAAAAACAATGATACAACCT
TTATTTTCAAAACCACCGCTTTTCGAATAACCAGTGGGCGTGGTTTCGGGACACAATTGC
AATACCCCCGCGCAAATGTTTGCAAGACCGCGGCACACATTACTCATTTGAGATTATTTT
TTCTAATAAGCATTCAGCACTGCACACTGTGAGGACAATGTTTCGCAATAGAGCGCGCTA
GAAAATGTCTCTGCGTCTCCACAGGGGGCGGGGCGATGGAAAATGAGATGAGAACGAAGA
CTGTGGCTAAAATCCTTAATAATGAAGATTATTAAACATTAAAAATAGATAAATGGATAG
AAAAAACCATGTTCTAAAAGCCTATATACATAAAAATAAGAAATTTTGAGATTTTTTTTT
CGTTGGTTATATTTGTCAGCCGCATTCGAGTTACATGCCGTTTTTCAAAAATCGAATTCC
AACATTTTGTTTCAGTAAAAACCCAAGAGAGTTCTATTCGAAACAAGATTTTGGCTTGGA
AATGCCAATTTTTCAGACTTTTCTTCACTTACTGGAGAAGTGTAGAATTTAATCAAAAAT
CGAATTTCAACAAGTTGTTAAAAAAATCTTTGCGCTTTATTTACAATACAAATCAAGGGG
TTTGGTCAAGTTTCAGCCGAGTGTTCAGAACATCCAAACTGAAAAAAAACCACATATTTA
CATTTTTCTATAACATCTAATAAAAAAATTAAAAATTTTCCAAAAAAAAAATTGGTGAAA
AATCATAAGGGGACCCTTGTGATTTTTTTTTTGAAAAAAATCATAAAAAATTGTTATGAC
CAAAAATGATTTTCTTTTTATTTTGTAACATTTTTCTTGAAAATCTTCTAAAATTCAGAG
GCACCACGGTTTCATCTCCGTTTTCCGGATCTACCATTTCTGAATCTACGTTTTCCGGAT
CTGGCACCGTGCCAACTCTTAAAACGCTATTTTTCTCGGAGAAAAACGTGACAACGATGC
TCCGTTGTTACGCGTCGCGTGTTGTTAAGCGTTTCCTCTAGAAGATATTTTCAAAAAACA
ACGTGCGTCGAATGAATAAAAAAGCGTTTTGTGCGTTGGCACGGTGCCAGATCCGGAAAT
CGTAGATCCGGAAATGGTAGATCCGGAAATGGTAAATCCGGAAAACGTAGATCCGGAATT
ACTCCAGATCTTGAAAACGT
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