SelenoDB
Release 2.0
Chart Advanced
Promoter Report for SPR00000509_2.0
Identity
PromoterSelenocysteine synthase (SecS)
SpeciesCavia porcellus (Guinea Pig)
Promoter IDSPR00000509
Promoter release2.0
External IDNone
Transcript SPT00000444_2.0
Annotation
Prediction method(s)
Promoter prediction (5000bp upstream, N/A) [Report annotation error]
OrientationForward
Structure gene structure

FeatureCol PromoterCol Coding exonCol Non coding exon (UTR)Col IntronCol SECIS
ResidueCol SecCol Cys or Other

Toolbox
Sequence
>SPR00000509_2.0 # Promoter # Selenocysteine synthase (SecS) # Guinea Pig (Cavia porcellus) Full length # Forward
TCCAAAGTCAATTGTACTGTGACATCTTTTGGCTTTTTTTTTAAACATTATGATAATAAT
CCAATGATAGAATGGCTACACAGAATTTAAGACTCTAAGGGTTGGGATATAGCTCAGAGG
TACAGTGCTTGTCTAGCCCTGGGTAGTATTTCTAGCAAACACACACACCAAAAAAAAATC
AGATTTTTTGATTCTAAATAGAATGTAAACAAAAACCCAGCACTATAAGAATTATGACCA
AAAAAAAAAAAAAAAGAACAGGTTAATAGTTCATTCAAGATGCTTCAAAACAAGAAGCCA
ACTGACCAACTCAGGCCAGAGAACAAATATCACAGGTCATGAGAGTTGATTTAAGACAGC
CAAATAGCTTTTGCCTTAGGCTACATAGCACCTTTCCTACCTTTTTCATTGATTCAAGTA
CAGCAAGATGTTTAGCAATAGCATAGACCCCACTGTGGATGGCTAAGAAGAAATCCAGAG
TCACATGACTGTCTTCCCTGCTTCTAAGAATGAACCTGCCACTGACCTGGGTTTTACCTA
GTACAGGAGTAGCATCATGGACAGCTCTTGAGATAATGTTAAGTTCTGCAGTCTTTTCTA
CTTGGATTATTCTCACCAGCATGAACAGTGATTCAGTAATAGTTTCAGTAATAACTAAAA
TATTTTTTAAAAATCAATTTCAGCCAGGTATGGTGGTGCGTACTTGTAATCCCAGCACTC
AATAGGCAGGAGGACTGCTGTGAGTTTGAGGCCAGCTTGTGCAACAAAGTGAGTTCCAGT
CACAGCTGTGATAGCAAGATCCTGTTTCAAAAAAAAAAGAAAGAAAGAGGCTGGGGATTT
AGCTCAGCGGCATAAGCACCTGCCTTACAAGCAGGTGGTTGTGAGTTTGATCCCCGGTAC
CAATTAAAAAAAAAAAGATAAAAGTCAACTTCAAAGTGGTGAAAAAACCATTAGTGTTTT
GGTGCTGGGTCATGTCCCAGTTTCATAGATTTTTTCAGGCTTATGCTGTTGATAGACAAC
ATGTGACCCCAAAGCAAATCAAACTGTGTTTTTAAAATTTCCCAACTAATGTTGATTTAA
TTTGCATATACCATGATGAATGATTTCATGGAGTATTTGAAGCATTTGAAGTCATCTGAT
GCACCAAACAAATGTTTTGGGACTTTCAGAAATGATCTGAGTAAAAAGTACAACCAGATT
TCCCCCATGCTTTCTTTTCAAAGTCAAGGGCTGCTATTTTGTACAGGTTTCTCTTTATTT
TTGTTTCATTATTTTTTTTATTACAACGTGTTTATAGTTATAATTATTACACCCAACAAG
GTGCTACATATATAGGACACATCTTAATTTTTATGTTTCCTCTCCCTCCTATTTCTCAAG
AGATCTAATCTTGGTATCTTTGTATGGTTACAAAGTTTGGATGCTTATTTGTCACAATGA
ATGGTCATTTCCTTTAGCTTCTATTTCATATTTTTTGGCATGAATATATGGCTTTTACAT
AGCCACAAACCCAAGAAATAGGATCATGCCTGTACTCGATCTTAGCCAAAGGGCTGAGAA
GTGATAGGATTGCATTTAAAAGTTCAATAACCTCTTGTTCATTTTAGATGCGAGTTCTGG
TAAAGATGAGAAACCATTATCCTCCAAAGCATCTTGAAGTCATTCTCAGAGCAAAGTCTC
GAATACTGTTCTCCAAGCCTACTTGCCCTGTGAATAGGTTTACTGTCTGGTCTTCCACTA
CCCAACAAGCTCTAGCAAATGCAATGTCTTCTAACAATGTGCTAATTATTGCCTCAGGTA
GAACACAACCTTTCAGTGGGGTTTTCTATTTGTTTTTGATTTCTGTTTCTAAGGTGGGTC
CCACTATGTTGCTCAGGCTGGTCTGAAAGTCCTAGGTTTACATGATTCTTCTGCATCAGC
CTCCTCAGCAGTTGGAACCATAGCCTGTGCCACCATGGCCAGTTGAAGATTGACCTTCTA
AAGGACAGCTTCAATTTCTGCTAGCATATCATGCTTGATAACTTCCAAGTTCAATTTTGA
GACACGAATCAGTGACAAATAATCATAAGTCAGGCTTCTTTCTTAAAGGAATTCTCTAGA
TCAAGTTATAGAAAGTTGCTGAGCTAAGACCCTCCTTTGCTATGACTGGCAGCATTTAGG
GCATTGTAGAAGTGAATAATTTGAGAGGAAGAGAGTAAAAATATCACAAGAAGTAAATGT
ACTGGCTGAGAAGCATTGTGTATTCTCAATCAGTAGTGATGTTCATTTGAGGGACCCTGA
GATCAAGTAAGAAAACGAAACCTGGATCAGCTGAAGTGTTAAGAAGTTTTTCTGTTTTTT
GTGTTAAGAAGTTTTCTGTTTTCAGATCACTTCTGAAAGTCCCAAAAGTGGCAGCTATTA
CTACAGCTTTGCAACTGGCTCAAGAGTGAGGCTATATATAGTAAGTGACAGGTGGGTTTT
CGCCTGGTCAAGCAAAGTGGTGGTCGTGGAGAAAGAAGGAAGAAATCTTTTACTGCATTT
TATAATAGTTGTAGTCAACTGGTTGCAAACATCATTACTTTTGCATTAGCCAGCTCTAGT
TTGTTTGTGGTTCCCATGATAACACTTGAGGGCTTATCTAGATTGCTTCTGTACCAATAA
GACAATAGAGGCTTTGTAGTCAGTGATGCCCAGTGAAGGAAGCTGCTGAAGAACTTTCTT
TGGGATACAGACAGCTTGTTCCAGGTCTAGATCCCAGAAGAAAAAGTTTCTTCCTGAGGA
CTCTATCAACTCACAAAGACATGTAATCTCCGAAAATCTGTCTGGAATATCCAGTTAAAC
ACAGAAATCCTGTTAACTGTTGTTTTGTGGAAGGTCTAGGATTAGTGTGATGGTCTGTAG
TCTATCAGGAAAGGCTTCATTTTTCTGTCTTTAAATATGACTGTTTTGAAATAATGTACT
ACGTTTTGGAAAAATTGTAATTTATTAAACTTTGTGTCAGGGGTGGTGGTGTCACTGGTT
TCTACCCCAGCAATGTAAACAAAAAACAAAACACCCCACACAAAACAAAGCAAGACAACA
CACACACACACACACACACACACACACACAAACTCTGTACCTTTATATCCCTTTTCTAAG
GCCAAAAGCAAATAAATGAATTTTTTGGGGCCAAATTTCTTGTTCTATGAGTAAAGCAGA
GAATCAGCTACATATTATATCAAAAGTAAATCATAAATTTATATCTTTCAAGATTTGCTT
GAGGAACTGGGAAAACTTGACAGGGTATCGGTAAACCCCTGGGAACATGGCTGTCCAGAT
ATATTATTAACCTGTCTGGGGGTCTGAAAGATGTCGATGGACCTAGTTATGGTACAGAGG
TAGATTGAAAAGGGCAATACAAAGACTACAGTGAACCAAGTGGCTTCAGGCAGAATTGAT
GCCAACATGGCATTTGGGTTACATACTACCTAAAGCAAGAGTCAAAATTTTGTTGCTTGT
GCTGAAGCTTTGAAAAATATCCTCACCCATTTGGTTTCCTCACCAATGAGACTGAAGTGT
TTAAATAGTGACTATAAGCCCTTCAATTATATCACAGATTTGAGTGTTTCCGTAGCTCCT
CTTTGAGGGGTATTTGGATGTTTGGGTCTATCTACTCTTCAGGCTCTAAGTATTTTTTCT
AACTTAGTAAACTGTTAAGGCCACAGCATATCAGGTCTAGTGTGAAGACCCTTACCTGGG
TATACATAAAAATAATAGATAAGACAAAGGCATATGTAGAGCAAATACAACTTGATTCTG
AATGAAGTGTGCGCTGGAACTTTAACCTCTTTGTATGCACTTCTGCTTTGCAGGATTTGC
TGATTTCTGTGTGAAAACACTCCTCACCACAGTTAATTTCAAGCTACCNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCTTACAGTCTTATTTCTCTGTCCCCAACAC
TTACCGCCAGGTTGTTCAATGGTTAAAGTAATTTATTAATTCAATTTTTTTTTCTTCTGC
TGTTTCTGGATATAGTGTTAGCTCTGCCTTTAGAAGAGTTTGCCGTAGTTCAGGTGTAGG
TGCGTGCGTGTGTGAGTGTGCGTGCGTGCGTGCGTGCGTGTGTGTGTGTGTGTGTGTATG
TGATGTCAGGTGGTTGGTGACATCCAAAGGTGACAGTGAAAAAGAGAAAAGGAATGCGGA
GAAGTAAAAGTACGGAAAGTTCAAAGGGAAGGTTCTGGAATCTGACAGACTAAAGCTGAA
GCACAGATTCTATATAGATCTCAGCCAACCCTCTTCACTAGAACACAGAACAATTCAAAA
TATTCTCTCACTTGTAAAACCTGAGCACTTTCGTCTCCTCAAGTCTTCCACAGAAGCGCA
CAGTCCTTGAAGTCTTAGCCTGGCTTCAAAACAATGGTTTAGGAAGACCAATTAGCTGTG
GCAGGCGGCGTTAATTTCCTTAGAATGAAACTCTCCAAACGCGCCCACTCCTTTGCGCAT
CCTCAAATACTAAGCCTTCCGGGAGCCCCAACGAGTGTAGTCTGCGCATGTGCGGGAGTT
GGACGCGTTGTTTGTGCTTCTATGTTTTTGTCCTTAGGTCCTGCCGTACCGTCCAGGCGG
CGAGTTGCATTCTGGTTCCGTCGTGTGTGTGTTGCCGAGTGAGCTGACTTTCACTTTACC
CCGGGGGCGCTAGAGCCACC
Chart Advanced