SelenoDB
Release 2.0
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Promoter Report for SPR00000540_2.0
Identity
PromotertRNA Sec 1 associated protein 1 (SECp43)
SpeciesCavia porcellus (Guinea Pig)
Promoter IDSPR00000540
Promoter release2.0
External IDNone
Transcript SPT00000475_2.0
Annotation
Prediction method(s)
Promoter prediction (5000bp upstream, N/A) [Report annotation error]
OrientationReverse
Structure gene structure

FeatureCol PromoterCol Coding exonCol Non coding exon (UTR)Col IntronCol SECIS
ResidueCol SecCol Cys or Other

ToolboxForward   Reverse    
Sequence
>SPR00000540_2.0 # Promoter # tRNA Sec 1 associated protein 1 (SECp43) # Guinea Pig (Cavia porcellus) Full length # Reverse
GCTGCGCACAAGGAGGGGCGGGCTGCTGAGGACTGAGTCCGGGCTCGCGTTCCCCGGCCC
GAGCCCCGCCCCCTGCAGGCCACGCGGGGCTCCCGCGGCGCGCGCCGAGGGCTCCGTGGC
GCAGGACGTGAACTCCAACTCCTCCACTTCCAACCTGCGCCCCTTTAGGGAGGCCCATGA
CCCGGGATCTCCATGCCCCGCCCACAGCCACAGCGTCCCCAGTCCTGGGGTTCCTCCCCT
TCTGACCCTCAAAAAGGCCCTCCTTCACCCAACCACGTACCCAGGTCTCCACCCCAGGAA
CCCTCCGCGGCAGACAAACCCGCTCCTTCCGTTCATTTCCAGCCTTTTGAGGATTCAAAG
CCCCTTTCCCTCAAAGCCATTCCTCCCTAGCGACACCGCGATTAGCTTTTCCCTCAGAGC
CCCGGCAGCCGCCCTCACTTACATCTCCCATCCACAGACTGGCCGCCATCCCGCACCCGG
GCGCGGACTTTGCGGGCCTGAGAGGCGCGCGCGGACTCGGGTCCGCGCTGTGGGGACCGC
CCCGGAGTTGGCCGCCTGCGACGCCTTCTGCGCACGCGCCGAAAGTTCGCTGCCCATCCA
GCCGGGTATTCCGCTCCGGGTTTTCCGGAGTCTCCCAGGGCGCTCAGCTTCCGGGTCGCA
GTGGGCGGTGTTCAGGCCAGAGTCGGGGCTGGACTTTCTCAGTACGTGATAAACTGCACA
CGGAACTACTTACATAAGTAATAAAAATAATGTATGCTCGTTGTAAAATGTTGAAAACAT
AAATTTTAAAAGCAGCAACTCTGGGGCCAGGGGTTTAACTCAGCGTTGTAAGTACTTGCC
TGGCAAGCGCGAGGTCGTGAGTTCGATCCCCGATACTAAAACACAAAACAGTCCTACGTT
TCCCAGTTTTCAAAATGTGGGATTTTTGTTAAAGCTGCGGGAAGAGGGAGGTAGGGTTGG
GCTAAAGGGAGTGTAAGTTCAGATAAATTCATCTCAAATGTTAATTCCCATGTCCTGTCC
TACCTGCATGAATCCCACTATCAAATTCCGGAGCACCAGGGGCTATTGCATGTCCCAGAA
CAGCGACAACCACGGAAATGGCCTCAATAAACACGGACGGTTTGGACAAATAATCCTGAT
AGATTCTCACTCCCTACCCCATTCTCAGATGGAACTCAGGTCCTTTATAGTGAGCTACGC
CCACCAGCCCCTCCCTCTTCCTTTACTTGGGCTCTAGCTAAGTCACTAAATTGTCCAGTC
TCTGCTTACATTTGTAGTCTCCCTGCCTCAACTTCTCAGGAAACTGGTATAGCAAATGTC
CATGGCCTGTTTATTTTTAAAATTTTTTTATTTTTTTGTACTGGGGATCGAACTCACCAC
CTCACTGCCAGGCAGGCGCTTATGCTGAACTAAATCCTCGGCCCTTCGTAGTTTAATGTT
AAAATTTGTTAGGCTGAGAACATCCCAAGGAATGAAGTCAGCTGGTAGTCAGTACAGAAA
GGGAAGCTTCTTTACCTGGGAGTTGGCATTTCTAATAGTCACCTGCACTCTAAGTGTCTG
ACTGGCCCCTAGTCTTTCCCTACCAGTCTTCACATCCCAAGCTTCGGATATACCCCAAAG
GTGACATCACTTGAGACCAGTATGTTTAATAAATGTTTACCTCGGTGCTGTAGGAGAGAA
AATGAGAAGCTAGGAAAGTAATTGATACAATGCCTGGCAGTAAACTTTGTCCAACATCAG
TTGGGCAAAAAAGTTTCATGAGATAGGATTTGTCCATTTTTTTCTAAACAAATCCAAATT
CTAGTAATGTTTGGAATTTGGTAGGCATTGAAAAAAATATTTGTTGAATTTATGACAGGC
ACATGCCTGTATTACCAAGGGGTTGAGGCAGGAGGATCACCTCGAGCTTGAGGCCAGCCT
GGGGAACCTAGTGAGCCTACACTTTCAAAAGCCAAAAAAAAAAAAAAAAAAAAAAACCCA
AACATCTCAAGGAAAAAAATCAGATGGAATCATTTTTCTAAAAATCACTGGTATCTGCCA
CCCAAGAATCCTGCCGATTCTACTTTCCTGTTACATACAGATGACTTCCCCTTTTCCCAC
ACAAAAAAAGAGAGTGCTGAACTCTGTCCCCTCCCTTTTAGAGACAAAGACTTGCTAAAT
TGCCCATTACATTGGTATGTGCCACCACACTCCGCCACACATGCACTCTTTTTGGAGACA
GGTTCTGGGTATGCAGTCCCAGCTGGCCTAATCCTGCCTCAGGCTATGTTAGATGATTAC
AGGGAGGCAACATCATGCCCAGCTTCAGGCTACAGATATAGATACAAAACTTTTCTGCAG
TATAAAAATAAATAAACTTTCTGCAGTAATGGAAATGTTCTGGGATTTGACAGGCACTGA
AAAAAAAAATCTCAGTGGTCCAATACCACAAACAAACAGCCATATATTATCAAGTACTTG
ACATATGGTTTGTACAACTGAAAAAGTTTAACAAGTTTTAAAACTGATTTCAATATAACA
GCCACTTGTAGCTCGTAACTACTATACTGGGCAAGTGGGCAAGTTGGCCCTGATTTGTTT
GCTCAGTGCTTATGAAAATCTACAATGCACATAAACTGTATTAAAACACCATGTGACTGT
TTCTTTCTGGTGCTGGGGATTGGATGCTAAGCAAGCTTTCTACCCAAACTGTACTTCCAG
CCCTGTAATTAATGTTTAATGTGCTACTGAAAGTATGGCAGCTCAGTAAGCATTTCTAAA
CATGTAATACACCCAAAAATCTGGTTTACAAAATTAAAACATTCATCCTTTCTCTTGTAT
TGCACCATTTTTTTTTTTTTTTAATCCAGTGGTTCCTGAAGAATGAACATCCAAATTTCT
TTCTTCTTTTGATGATTTTGAACAGCCTTGGGGGAACCCACAGGGGACATCCTTCAAGCT
GTAGGTGACACTAGCCTCAGGAGCATGGGCTCATTTGGCCCTTCCCAACAACACTTGGCA
CATAGTAAAACCCTGCCTTGAAAAAAGTGTAGAAAAATAAGTGGCTTATTTTATAAAACT
CTTAATTTTATTCAAAGTGTTAAAAGGTTACACTCTCCCCTCAAAAATATTTTACAATTT
TAAAAAATTAGAACTATTTTCTCAGCCACTGTACAGATTGCTGCTTCCTTTTCGTGAGAC
CAGCCTCTTCCCCTCCCTCACCTCTTAATATTGCCATACATTTGTGAATAAAACCTCCAT
CCTCTCTCTGCCTATACCCTGCTCTGCCCTGCCCAGTGGGGATTTGGGGTCCTTGGCTGC
ATATGAGGCCCAATGGATGGGGACCATACAAGCAACACCCGATAGGCAAACACTATGCTT
TGTGCTTCTGGGTGAATAGCTACAGTAGTTGGCTTTTTCCTTCAAGTGAATCATTGTCTT
TTGCCCTATGGACACCTGTTCAGAGCCAAGTATTTGGCTTGGGGTTGCCCACAGCTCTGT
ATCCCTGCCCCTTCTCCAGCTGTCCCAGGCCTGGGTCCATGACAGCTGGGTCTGATGACT
TTTAACTGTCTGGGTGCCCATGGACTGTTAGGACAGGAAGAGTAGCACATAATTAGAGTT
GGGGCTTGGTGGAGCCCCAGCTTCTCAGAGTGCAGGCACCAAATCCCCAGGGAGAGGACA
TTGTGGTACTGTGGAAGGCAAAGTCAGAGCCAGCCACGAGGGAGATAGAGCAGTGGGGCA
AAAGGTCCAGCCACAGGAGTCTGCGGTGAGGGCCAGCAATGTTCCTTCTAACAAACCCTC
CTCTCCCTACTTCATCCTGCAGGTGCCAGGATGATTCCAGAAAGGAGGATGAAAAAGAGG
AGAAGGATTCTGCTCTGTTGATGGGGAAAAAGCAGGAGATGACACAGTGTTCAGAACAGG
CTGGGGAGAGGCTGCTGGGATTTGCTGCCATCTCTGCTTCCCTGTTCTGTGAGGGAAGGT
GGGGTCCAGGCACTCGTGGGCTTCATCAGCTCTGTTCCTTGTCCTTGACTAATAAGACTG
TGTGCTGGCCCCCGCTGGACACAGATAAGACCACACGGTTCTCCAGCTGTTTGCCAGTCA
TCTCCACGGGGCTCCAGGCATCATCGTCTTGCCCTGTGCCCAGCTGGTAGTTGGTACCCA
TGCCCCAGGCAAAAACACGGCCTGCAGGAAACAAAAACAGGGGCAGCTGTCTCCAGGGTC
CCAGCCCGATGTGTCCAAACCATCAAGAGCTAGAGACATGGCGATGAATTTTCATCTTGG
CCAACAGCAGCTGGATGAGGTCCCGGCTCCTAAGGGTCCAGTTAAAATGAGAGAAGCCAA
GGAGAGGATGGTCTTAAAAATGGCATGGGATTTCTTCCTGTTGCTAGCCATGGCATTCAA
GGCCCTGCATGACTGGCTGCTCACCTAAACCCTTGTCCAATCCTCCAAATCCCAGGAACA
GCCACTTTTGAAAGTTTCTCTGCTGGGGACACCATCCTGTGCTGTTTACAAAGGACTGAA
ACTTCAAGATGCACTGCTTCCTCAGGAAGTCTTCCCAAATAACCTCTCCAACCTAACTTC
CAACAGAGCTGTGCCCCTCACCCACTCAGGCTTTGGCGGCTTCAGCTCACATCCTCCTGC
TGTGCTAGCCAGGACCCTAACTACTAAATATTTTTTCTCTTAATATTCTAGGTCCAATCC
CTGGGGAAGCTGCTAACTAAGGAACCCCTTTGATGTAGACAGCCTGAGTCAGGAGTCTGG
AGACCTCAATTCAAGTCTCACAGCTTCCCTGGCCTCAGTTCTGTCTCCCTCTTTGGTTTT
TTTCCTCCTCTGCAGAACAAATCACCTCTATTAAAATAATGTATATCCACCAAAGCCAGA
GCTTGAGAGGCAGGAGCAAAGCAGCGCCATCATAACATGATCATCATACCTCAGCTCTGA
CTTACAGTGGACGTTAGAACCTGCTGGGAGTCCGCTAGGAAATCACGATTCCCAGGCCCA
TGAAACAAGTACAGGCAGCC
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