SelenoDB
Release 2.0
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Promoter Report for SPR00000780_2.0
Identity
PromoterMethionine sulfoxide reductase A (MsrA)
SpeciesDipodomys ordii (Kangaroo rat)
Promoter IDSPR00000780
Promoter release2.0
External IDNone
Transcript SPT00000715_2.0
Annotation
Prediction method(s)
Promoter prediction (5000bp upstream, N/A) [Report annotation error]
OrientationForward
Structure gene structure

FeatureCol PromoterCol Coding exonCol Non coding exon (UTR)Col IntronCol SECIS
ResidueCol SecCol Cys or Other

Toolbox
Sequence
>SPR00000780_2.0 # Promoter # Methionine sulfoxide reductase A (MsrA) # Kangaroo rat (Dipodomys ordii) Full length # Forward
ATTTGGGGCTGCTGTCCTGGGCTGGGTGCAGTTTGAGCGTCTGGCAGTTCCCAGCTCTGC
GGCTGCTTCCTGCAGTCTCCAGCTGCTCGTGAGTCTCAGTGCAGCCTTCAGCCTGGGACA
GGGCTCGCCTTCCCAGTACTCAGCACGATAGCAGAGACTAGGGACATTTAAAATACTTGT
TATTTCCATCTCTTCAAAGGCAATACATCACATAGAGCACTGCTTAAGAGTAACAAGAGG
CTTTTTTGCTTTTGTGTTGTTGCTGCTGTTAACACATTAAGTGGTAGTATGTTAGACACA
TTCTGCATTTTCCCCAGCACAGAATTACTGCATTGATTCTAAGGGGGCATATTGTCACAC
AGCTGCAGTAGAAGCCTGGTATCAACCTTTCTGCACACAATCCTGTGTTGCATGTTTGTA
CATAAGGAAGAAATGGTATTTTGTACTATAGAAGTTGCTCTTTGATGAACCCTGCCAATG
TTCCATTTTCCAATCCACATTTTATTCCCCTTAGAATCTTTTCTCTCCACTGGATACCAG
CAGTAGACAATAACTTAAAGAATTACAAGCCTGTTTTTTTTTCTTTTTAGATATATATCA
TCCTGAGCAAAGCCAACATCAGTGTGCATATCTAGAAAGATTTCCCTTTATTTGGAAAGT
CACACAATTAGCTATACTTGCTTCATTTCTAATTTCATTTCTAATTTCAAAGAGAATGGA
GACACATTTGCCATGAGGTTTCTAATAACATATTCCATATTCCATGTTTAATTAAGAGCT
TCTATCAAGAAAGAGAACCAGAATCCCTTTTCTTCATCAGAAAATAGCAGCCAGAAAGCC
AGTAGGGCTGACCCTAGCCCAGAGCAGGCTCGTGGTTAATGCTGACAGGGACAGAGTGGT
AAAGAAAGGTGTTGGCCCAGAACAGATTGCCTGGGGAGAACTGGACCTGTCAGGCTCAGC
TGAGCACTGAGCTGGTCATTTATCACTGTCAGAGGGGATGGGCTGGGAGCTGGGGGTGGG
GGGAGTTAGGGGGTGAGGGGGGTGCTGACTGATAACTGACATCACCGTCCTGCAAGGTGG
AGGAACATTCTGCTATATGCTGGGAGAATTGCTAAAACCACATAGGACCTTCCATCCACC
GTGTTGTACGGGACTGTTCGTAGAAGCAGAGTTCAGAGCATGGGAGAGGCTATAGGATGA
GCATATGCTGTAGTGGGCTGTGCACTGATAGGATGAGCAAATGCCGTGCACCTTAATTAC
CTTCCTAGGACCTGGATCCTCTGCACAAGGTCAAACATATCCACAAATGTCGGAGAGAAC
ATAGATAACTTCACTTTATCTGAGTATTGGGGTGCAAAAGCCACCCATGCCAGCAGAGTT
GCACCCTACAAGTCTGTGAAGACTATCTCAGGAAAAAATAATGAAAAGTATTATTTCTCT
GTGGTGCTTTAGTGACATGTTTTAGCATCTTAAAATCTAAAATACTGCCGGGCGCTGGTG
GCTCACGCCTGTAATCCTAGCTACTCAGGAGGTTGAGATCTGAGGATCGCGGTTCAAAGC
CAGCCCGGGCAGGAAAGACCGTGAGACTCCTATCTCCAATAAACCACCAGAAAACCGGAA
GTGGTGCTGTAGCTCAAGTGGTAGAGCGCTCGCCTTGAGCTGGAGAGCTGAGGGACAGCG
CCCAGGCCCAGAGTTCAAGCCCCATGACCGACAAAAAAAAAAAAAAATCTAAAATACTTC
ATAATAAATGGGGAACATCGATGTTCGTATAGAGGGTGCTTATCTTGAATTATAGTTCAG
CACCGTTGACCTTCACAAGGATGTCACTCGCATAGGCTGAAACCTAGATCTTAATCCGTC
AGATAACCTTATTTTAACTCTCACAATTATTTAAGGTCCATGGTCATTAAGAATTATTTG
CGCTAGTGGGGAGCATTTCGTGAAAGTCAAGTAGAAATTTTCTATCTATGAATACATGAT
TGTAGCCTTCCCAGACATGTAAGATACATTTTTAAAAATTGGCAACCAATGAAAATATTC
AAAGAGTGAAACCAGCTACTTCTTCAAACTCAGGGAGTGACAGGGGAGCGTTTTTATTTA
GAAGTTTAGCCTGGGAGTGTAGGCTCACAGTGGGCACTGGAAAGAAGGGGTGCTGTGGAC
ACAGGCAGGGTGCATGCATCTGGTGGGGAACAGGAGTGAAGAGGCGGACGAAGGGTGAAG
ATAGGGTGAGACTCTGGGCCTTGTGACTTTCCCTTGGNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAGGACAATATC
AGGGAGCAGGCAGTACGTGTAGGCCAACAAGTCTTAGTCTCCTATCAAGTCTTGGTCTGT
ATCTGGTTGGCCATTGTCTCAGGCACGTTCCTGCAGGGTCCCACGGTGTTTCCAGGGAAG
CCATTGCTGCCTGAACAAGATGATTCCATTTCTGCTAAAAGAGACAGTGGCATTGGCTTG
GGCGAAGATGCACCCCAGGTCCTGTCACACTTGGGGTGGGGTGGGAGCTTACATGAGAGA
ATGATCTGCTGTAAGCCTCATTGGTCCTGGAACCTTGAAGAGTTCCTCTTACCTTGGTCA
GTCTTCAAGTGGGGGAAAAGAGAGATTAGGCAAATTTAGGGCTAATCAACCTATTACCAG
TCTTTAGATAGAGTCTGTTTAAGTAATCAATGTATCGATGTGCAGAATTAAGCAGGGACT
GGTCCCAAAGCTTAAAGCAGTAAGGAGAAAAAATTTTAAAATGGAGGCAGAGATGCCAAA
CTTATATGCTGTTTTTAGATGCCTTCAGATATCTTCAGGCCCAAGTGAAAAGTTGGTGCT
TTGTAGCAAAGCAAGCTGTAAATCTTTTTTCCAGGCTTTGTCTAATCCAGTACCCCTAAT
CCTGGGATAATTCTGTGTCCAGTGGTTACCAGGAACTCCCCAGACAGCAGCTGTCCTTCC
GGAAAGCTCCAGGTGTGTTCTTTTGGCGACCTAGCCCATAGGAGCTTGGAGCATCTAAAT
CTTTTCTTAAGTCCCCCACCTAGCTGCCCTATCATCCAGAAGACAAGAATTTTAATAATC
ATAGTTTGAGCACAGGATAGGAAGATGATGACTAGTTTATACCTAAATCTGAATTACTGC
AGGTATATCATTGATTTGTTTTGCTGTAGCTGGTGTGTGTGTGTGTGTGTGTGTGTGTGT
GTGTGTGTGTGTGTTGGTACTTAGGCTTTGTATTCAGGGCCTGGGTGCTGTCTCTTAGCT
TTTTCACTCAAGGCCCACAGCTCCACTCCTAGATTTCTGGTAGTTAATTGGAGATAAGGG
TTTCCTGACTGTCCTGCCTAGGCTAGCTTTGAAACAATTCTCAGATCTCAACCTTCTGGG
TAGGATTGCAGGTCCTGGCTGCTGTAACTATTTTAAGGAAGGAAAGGGATAAAATTTGAA
GCAATTACACAATTGCAATATCAATGTGACCTTCTAAAGCTTTTGAACATGCCTCCAAAT
CCCCTTCAAAATCTTTAGGAAAGTTTACTTTGACCTGGTCTTGCGCTAATTAACCTTTCT
GTTCCTCAGGCACTAGGCTTTCAAACATAGATGCAAATCTATTCTCATATATCCTTGATG
GAGGACAAGTCATCTCCATCAGTTGAGTTATTCTCTTGGAGCATGTAGACTTGGAGCACA
CCCCACTGAGCAGAGAGCAGGGGGAGGGATGTGTGCCTCACCAGCCAGATTGGGACAGGG
CCACAGACGGTCCTGCCTGTCGACCCTCCTGTCTCCACTGCAGACCTTGCTAGTAATCAG
TAGTTAGGATCCAGTTAGTGAACAGCTGTTCTGTTTACTAAGTTGGATTGTTTCTGTGAT
GAAACATGCCACTAATTGTGAAACAGAAATTTACAAATGCTGACATTTATAAGGGCTATG
CATCCCCACATTTTCTTTAGCCTATACGATGCATTTTAAGGAACTTCATGCCTTGACCCC
TGAATACTTGCCTTAAGAAAGTTTCAATGGGTAGTTGCTTTAGAAACACAGCCAGAATTT
CCAGAAATAGGCCCCACTGTTGTTAGTTTAAAACACACACACACACACACACACACACAC
ACGCACACACACACACACACACACACACACACACACCTACCTACCTACCTCATTATTGCC
TTCGTGAGTCCTAGATGGAGCATACTTGAGAGCTTGGGGGTTCATGAGAACAAGTGAGCA
CAAGAAAGCCTAACCGGGTTGCTTTTTATTTCTAAATCAGTCCTTCATTTGCCCCAAGGA
AGGAGCACAATTTCGAGTGGGGGCCTGGGCTGGAGGGGTAGTGAGCAGCATGGGAACGTC
CATCTGGTCTTTCAGATGGTGAATATCTTTGGTTCTTGGAAGCAGTGCTTGAATTGCAGG
GAAGTGACATGTTCTGCTATTGGTTCTGTAAAAATCAATCCCAATGTTTCCCTGCTCCTT
TCCCTGATCACATCGATGTGCTTATTGGGTACTATTTTTTTGTCAGAGTTTAGCTGAGAA
GGTGGGGCATCCTTTAACCCCAGGGGGTGGTCAGACATAGCCGGAATCCTCTGACCAGGG
GTCGAAGAGCCAGTTGTTCAGGCGTGCAGCCGCGTGGGCCTTGGCACGCTCGGGGCCCCC
TGCCTGAGCTGGCTGGTGTCTGCTCTTAGGCAATGGCCATCAAAAACCAGGTAAGTGAAA
CTTTGTTTTGAGGGTAGGCTTTGGTGCATTTCTAACTCCAAACAAGAAGTCGCTCATTGA
CACGTTTAATGACATGTGTTAGTATGTATGTAGAACTTTACACTTAAACTTGCATTTCTT
TCTTTCTTTCTCTAGCCAGA
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