SelenoDB
Release 2.0
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Promoter Report for SPR00000787_2.0
Identity
PromoterSelenocysteine synthase (SecS)
SpeciesDipodomys ordii (Kangaroo rat)
Promoter IDSPR00000787
Promoter release2.0
External IDNone
Transcript SPT00000722_2.0
Annotation
Prediction method(s)
Promoter prediction (5000bp upstream, N/A) [Report annotation error]
OrientationReverse
Structure gene structure

FeatureCol PromoterCol Coding exonCol Non coding exon (UTR)Col IntronCol SECIS
ResidueCol SecCol Cys or Other

ToolboxForward   Reverse    
Sequence
>SPR00000787_2.0 # Promoter # Selenocysteine synthase (SecS) # Kangaroo rat (Dipodomys ordii) Full length # Reverse
TGACGACGGCGGCGCCCGGCGCCCCGGGCGGGAGGACCGGAGACCCTCCCCTCACACCTC
ACTCCGGACAGGCGGAAGCAGAAGGCCACTTGTCGCCCAGGAGGTACGGCAGGACCCGAG
GGCCAAAACATTCACAATCGCGGCTTTTCTCTGCACATGCGCAGATCACTGAACAGGCGC
CCTCCCTGGGANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNATTCTGTATACTGGACATGATATATAATGGTGGCCAAGTGCTAGTGGCTCCTGC
CTTTAATCCTAGCTGTTCAGGAGGCTAAAATCTGAACATTACAATTTGAAGCCAGCCCAA
GCAGACAAATCCCAGATACTCTTATCTTCAATTAAGTAGCAAAAAAGTCAGACACGAAGG
TGTGACTCAAGTGGTAAAGCATCCACCTTGAATGGAAAAAGTTAGGCAAGAGCATGAGGC
CCTAAGTCCAAGCCCCAGCGTGCGCGCGTGCCGGCACACGCACGCACGCGCACACACACA
CGCATATAATAGAAAAGGAAGGAAAGGCTAAAAGTAATAAACTAAGACATAATCTCAAAA
AAAAGAAAAGAAATACTAAGTAAATAGAAGAAAAAGAATTACTACAGATAAGACAAAAAC
TCAGGGAAATTGAAATTTTCTCAATACATATGGGCACCTATAACGATGTACCATAAACTG
AGTGGCTTACAAACAGCAGATGTCTTATTTCTAATCGGTTTGGAGACTGAGAAGTCTAAA
ATCCAGGTACTTCTGTTGAGGGCTTGCCAGATGGCCATCTTTTCTCTTCTGTCTTGGCCC
TCACTTGTGGAGAGGGTGATCAATGTTTCTGAGGTCTGCCCTCATGACCTCCTCCCCTCC
CAAGAAACCCTCCTCCCTTACCATCACCTCAAGGATTAGGATCTCAGTGTGTGAATTTTA
GGGAAACTCTGCTGAGCATGTAGCACATGTAGTACAGTTAAGAATTTACAAGTAGCAGAG
TTAAGAATTTACAAGTAGGGCTGGGAAGGTGGCTCAGTGGTAGAGCACTTGCCTTGCATG
CATGAGGCCCTGGGTTCGATTTCTCAGCACCACATAAGCAAAAAGAAAAAAGCCGGAAGT
GGTACTATGGCTCAACTGGTAGAGCGCTAGCCTTGAGCTGAAGAGCTGAGGGACAGCGCC
CAGGCCCAGAGTTCAGGCCCACTACCGGACCCCCCCCCAAATAAAAGAATTTATAAGTAT
TTCCGAATGAATAAATTATAAGACTAGGTTCCAGTGGTTGCTTATCATTTGGTAGTTGCT
GAATTAACACAGATGTGGAGTAAGGAAAGCAAGCAGGGACCTGGGAACAGGCAACATCAC
ATATTACAAAGGTGCTTTACCTTGAGATGTTTTCCAGTGGCAGATATAGATGAGCAAATA
AGGACCACACTCTTCACCATTCCATTCACGCGTGATTTAAAATGTTTGGAGTAGAATAAA
TAACAGGTCTCTTAAGAGGCAGACCTCACTAATGAGGTCTCTTAACCTCATTAAAGAAGT
CTGGTAAGCAATTTGAAGCAAAGTAGCCTCCACACCAAAGCCAAGCTTCAAAGAGCAATA
GAAAAAGAGAATAAGAGAGTAGAAGAATCCGTTATTAGCTGGGCACTGTTGACTCATGCT
TGCAATTCTGGTTACTCAAAAGGCTGAAATCCTAAGAGTCACAGTTCAGAACCAACCTAG
GCAGAAAAGTCCACAATATTCCATCTCAAAAAATAACTATCAAAAAGCCAACCTGAAGAG
GTGAATGGATTCAAGTGATAGAATGCCAGCTGAACAACTAAGCTGAGTTCAAGCAAGATC
CTGAGTTCAAGTCCCAGTAACACTGCCACTCCCCCAAAAATATAACTAGGTTGTAAGAGA
ATTCAGAAAGCAAGGTCCTGCTTTTGTCTTCACTATCTCTGATGGAAATAGAGACATTAA
AGTGGATGGAGTCATAGCAGAAGACCACTGAAGACTTTTCCTGGGATGAGTGGAGCAATT
CTGTCTCCAGAGAGAAGAGACTTACATTTCCCAGGAAAAGCAAGCACAAGAGAAAGGCAG
CAGGAAGACCTGTGCAGCCTGTGAACAGGCTTGGAGTTTGATGACATGGGAAACATGACT
GATTACCCAGTATGATGCCAGGTGGTAAGGAAGGGATGGGGAACAGAAGTGGTAGCCAAG
AAATACAGAGCATGTCTCTGCCACAGGCAGATGGAGAGTTCAGTGAAAGTCTGAGCAAAT
TACCAGGTCACTCCAAGCTTCAGCTACTCTTTTGAGCAAGGGATGATAATGAGGAAAACA
ATGTTCCACTCACAGTAGTATTAAATCCATCCCTTGATCCTAGGTGTACAGTGTGGCGTG
GCTGCCTCTCTCTTCTTACTGAAGGCTTGAAAAAAACTAGGTAGATTTCTCCAAAGACCT
TCCCAATGAGCATTCTAGAAGAAAATTGAGTTTCGTCAATCAGATTGTATAATCAGCCCT
CCATATCCGCAGGTTCCATATCTGAAATCCACCCAACTGTGATCATAAATAATTGAGAAA
AATTGCATCTGTACTGAACATGTACATTGTGTCTTGTCATTATTTCCTAAACAATATAGA
GTTTACATAGAGTTTATATTGTATTAGATTTATAAGTAAACTAGCCATAACTTAAAGTAT
GAGTGTGCATGCATACTAAGCTATTCTATATAAATAAGTCCAAGGATTTCGTGTATATAC
AGGAGCCCTGGAGCCAATCCCTCATGGATACCAAGAGACGAATGTATGCACCTAAGATTT
GGAAAGCAATCCAGTGGAGACCATGTTCCCCAGCCATTCAATCATTTGCTGCCAACTGGC
CAACAAGGTAGAAAGAAGCCTTTTAGTATCTGTTCCCTAGCCTTCTGGGTCCGTGTGGGC
ACTATGGCTTCCTATTGGCAAGAAACAGGCTCAACAGTGGGTTCTTGAAATCAGCCACTA
GCAATAGTCTCCAAGGTGCTAGATACCCTAATGAGTCAGGTCAACAGTATTCTAGGAGCC
ATTTCTAGAAACCCAGACTACAGCCCACACTCAAGATCCTCCAGTGCTTGTTTTTGATAC
TTTATCCCTTTCAAGTCACAATTAACGATACCTACAAGTGTTTTGGTTTCCTGTACTCAA
TCACAAGTCTTCAATTAGGTGTTAGCAACTATTTTCACTCACCATGATAACTTTGTACCA
CATTTCATAAAAGGAAAAGTTTTCCTTCATTCCTTCCTTCTTTTCTTCCTTCCTTCCTTC
CTGCCTTCTTCCTTCCCTCCCTTCCTCCCTACATTCATTCCTTCTTTCCTTCCTTTCTTC
CTTTAGTAAAAGCCTCATTT
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