SelenoDB
Release 2.0
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Promoter Report for SPR00000905_2.0
Identity
PromotertRNA Sec 1 associated protein 1 (SECp43)
SpeciesEchinops telfairi (Lesser hedgehog)
Promoter IDSPR00000905
Promoter release2.0
External IDNone
Transcript SPT00000840_2.0
Annotation
Prediction method(s)
Promoter prediction (5000bp upstream, N/A) [Report annotation error]
OrientationReverse
Structure gene structure

FeatureCol PromoterCol Coding exonCol Non coding exon (UTR)Col IntronCol SECIS
ResidueCol SecCol Cys or Other

ToolboxForward   Reverse    
Sequence
>SPR00000905_2.0 # Promoter # tRNA Sec 1 associated protein 1 (SECp43) # Lesser hedgehog (Echinops telfairi) Full length # Reverse
CTTCAAATTTGTTCCCATTAAGGTGCCTCCCCGTTGGACCTAAGGGCTCCATCCCATCCC
TCGGGTCCTAGCGCGAACCCCAGCCATCTAGAGAATTCCAATCCCAACGACCCCCACAGG
GCGGCGGCGTGGGACTGCTGCTCAAGCTCACGGCTGAAATGGATGGAAACCGGCGGCCTC
CTCGTTCTTTCCCTCAGGGGCCAGTGGGTTTGAACCGCCCATCGTTGGCTTCCCAACGCT
TCACCCACGGCACCACCAAGGCTCCCTCTGGAACCACAGCGCTCGACAATCGGTGAGATC
CCGCCCGTTCCATCCCCTCCGAGAACCTTCCCGTCCCTTCCAGGAACGAAGGTGAGAATC
AAGACCCCTCCCCCCCCGGCGCTGCCCCTTCCCGACGTGCGCGGACCCGCTTCTGTCACC
GAGCGGAAGCCCCTCGCGTCCATTCACCTCCACCCCTTTGAGCCCTGAGGACCCTTCCCC
TTCAGAACCTGTGTCTCTCGAGACAACGAGACTCCTCCTCGAACCCCGGGCGGCCGCCCT
GACTTACGTCCCCCATCCAGAGGCTGGCCGCCATGCCCGCTCCGGGCCGGGACTGCGCGG
GCCGCAGAGGCGGGTGCCTGCGCCAGGACGCGCTCCGGGGCCGCCACGGCGCATGCGCGT
GCGCGGCCCTGTGCGCACGCTCCGAAGCTAGCGGCCCGGGGCGGGGCTTGCGGGAAACCG
GGTCCGGCTTGCGGGGCGCAGAGGTGCTGACCCTGGAGTCCGCGGGCCGGAGACCCCGAG
TAAGCCTTCCTGGTTGTTTTTTTTATTTTTAGACCTTTATATGCACAGGTGTACTTAAAA
CACACACAAGAATGTTTTGTTAAAGTACTTGATGTAACAAATTGCAAATATAAACCCAAA
CTCACTGCCATCAAATCAACGCTGACTCCTAGCGAACCCCTGTGGGTTTTCCACGACTTA
TTTTTTTTTGAGACCAACTCTTTACAGTAGAAAGCCCAGTCTTTGTCCCGCGAAGCTGCT
GGTGGTTTCGAACTGCCTGCCTGCCGACCATGTGGATGCATAATCACTACACCACCAGGG
CTCCTTACAAGTGGAAGCAAATTATTTTTTTTAAAGCTGAAGTCCGCCTCCGCCCCGTTG
GAGCCCCATCTTTCTCCAGTTAGTTTGTAGAATCCTGTTCCAGTCTCCAAAACCCCACGG
GGGCAGTTCTACTCTGTCCCATGAAGTCACTCTGAGTCACAATGACAGTGAATTTGTTTA
TGATCCGGGGAAAGCTTTTGCCCCACCGGAGTCAGGTCACACCACGACCCGATTCTCCCT
CTCTGCCAGACTGGGAGTCTGTTGAAGCTGAGTTGGGTCATCGTACCAATCAATCCCTAA
ATCCTGTCACAGTACTTCCTCTTAAATCCTGCCATTTTCCAGCCCTCCTCCCACCCACCA
GGCACAGCCTGCGGGAGCTCTGCTTGGGATAGGGGAGGTGGCCAGTAGACGTGGCTTGGA
TAATCCGAGCACCTGAATTTTGACTCTTTAGGCTTCTCCCTCACTTCTCAGAGTGACAAG
CTTCTGTAGATGGCAGCTGTCATCTTTCAGAGGGTGATACTCACCCCGAGTGCATGGAGG
CCCTTTCTGGGGCTTCTCTACATGCTTGCATATCGTGAACTTGGGGGTGTATCCAGTGGT
GGGATTCAAATCATTTACCAACCAGTTCATTTTTAAGTATAAGAAAGCAATATACAAAAG
GCAGTTTATTTCATACAGTTAATACTGAATAAAAGAGGTACACAAACTTTTAAGAAAATG
TTAAATTATGAATGAAAAAATATTAACTAGTACCAGTCAAAAAACAATAAAACTATTTAC
AATGTTCGATATTGCTTCTGTGATTGGCACACTCACTTGCAATATTCTTTGCTTTTATTT
TACNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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TTCTGTCACTATTTATTTATTGGGAGCCACTGTACTGTATATACCCATTCCTTACTATCA
AAAAAATCAATTTGGAAATTTTATATCTTTAATTTAGAAAGCTAAGTTTCATAGGACAGG
GACCTTTCAATTTTTCTTCTTGCTAATTAAAGGTACCTACAATAATGTATAGAATATGGT
AAGCACTGACAGATATTTTTTGAATGGTATTACAATATACACCAGTTCCTGACCCCATCT
TCCCCTGCCCTTCTTAAGTAGTTTTCCATTTTTTTATTCCCTCTGGAATCTACTGCTTCC
TTCCAAATTGCACTACTTTATCTTCATTTGTGGCTTTTTTTTTTTTTTGGTGGCTTTTAT
TTTAGCAACTGCTGCTCTCATGCATACACGTCTCCATCTTCGTTGTGATTTTTGTTAGAA
CTGAACATTTATGTAATTATCATGGCTTTGTACATAGTATTTATAGCTGAGCCACATCCA
CACCAACCGTCAAGTTGATTCTGACTCATAGCAACCCTACATGACAGTCAAAGGCGTCCC
TGTGAGTTTCCCAGATTGTAAATTATAGAAGCACAAAGTCTCATCTTTCTCCCTCAGAGT
ACCTAGGAGGTTTGAACTGCTGACCTTGTGGTTAGCAGCCCAACACTTAATCCACTCCAC
TACCAGGGATACTATTAAGCCAAATGAGATAACTACAGTTACAGACTTTGGGGGGTAGCC
AGTCCAGGATGGAAAGATGAAATTGAGATGTTACTTGATGTGCTTGAACACACAATTATA
AACTTCTGATAGAGATGCCAGCACTGAACTAATGAGATATATACATTAAAACTAAGCACA
TGAAAAATAAGGTAGCTACAAGGAAATAAAAAATGTACAAGAATTGTAATAGCAGACAGA
GAGCATCTATTGTGCCGGACACTGTTCTAATATATAGAAAGCGCCAACAGTGTGTTATAA
AGTTCTCAGGTGCAATACAAAGAAAAGGAATCGCGACTGTGGGCTCAGGATGCCAATTTA
GCTTCCAGCATCAGCTGTTTACTTATAGTTTCTGGAACTCAAGCACATCACTTCAGCTCT
TAGGATCGCTTCCCCATTTATGTCGTCGTGCAGTCCCTATTTTTCAAGGCTGATGTGAGG
ATTAAATGCACTCACACATATAAAGTGCTTCTCACAAGGCCTGCTCCATGCACTCAAGTT
AATTCTGACTCACAGGAACCCTTTAGGACAGGGTAGAGCTGCCCCTGTGGATTTCAGAGA
CTAACTCTGTCGGAGTAGAAAGCCTTGTCTTTCTCCCTTGGAGCAGGCAGGTGTCTCGAA
CTGCTGAACTTGTAAGTTAGCAACCTACAGGGTACTCACTATGCCCCTAGGTGCTCAACA
GAGAGCAGCTGTTAGTTTAAGGTCAGGGTGCTGAACATCTGCTACACTGTCAAAAAGGAA
GATGCCAGTAAGTCAGTACAACTCAAATGGACCTTTTGTGGAAGCAGCAGGAAGCAGGAT
ATAGCAGCCATACAAACACCCCTTTATAAAAAAAATACCGAGNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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