SelenoDB
Release 2.0
Chart Advanced
Promoter Report for SPR00000962_2.0
Identity
PromoterSECIS binding protein 2 (SBP2)
SpeciesErinaceus europaeus (Hedgehog)
Promoter IDSPR00000962
Promoter release2.0
External IDNone
Transcript SPT00000897_2.0
Annotation
Prediction method(s)
Promoter prediction (5000bp upstream, N/A) [Report annotation error]
OrientationReverse
Structure gene structure

FeatureCol PromoterCol Coding exonCol Non coding exon (UTR)Col IntronCol SECIS
ResidueCol SecCol Cys or Other

ToolboxForward   Reverse    
Sequence
>SPR00000962_2.0 # Promoter # SECIS binding protein 2 (SBP2) # Hedgehog (Erinaceus europaeus) Full length # Reverse
CACCTATAATAAAGATTTTGAAAAAATGACTTGTTCAGCAATGATGTCAAAAACCTAAAC
TAGTCCCTAATTTTGGGTACTGAAATTCAATCATCATAAACGCAATACTGGAAAACTTTC
AGTAGCATTCCAGCTCTAAGTAACACAAGTATCATGTTGCAAAAGACCTCCAACTGGTAC
TTCCTCAAGTTTCTCAGCAAAACTTGATTTCCAAATTACTCTGAATCTCTTTGAAGGATT
TCTCAAATTATTAAAGAAATCAGCAAGCTTCATGCTTAAGAGCAAAACGTGGACATGAAC
AAAACATAGCAAAAACACTAGGAAGGAAGAAGGTACCTGCACATAGAGAGGCCTCCGCAT
GCTAAAAAGAAAAACAAACAAAGTAATTACTTTCTGTTTAAGGTCAACGCCACACACTCA
ANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGCTTCACAGGTGGTAAAGC
AGGTCTGCAGGTGTCTATCTTTCTCTCCTCCTCTTTGTCTTCCCCTCCTCTCTCCATTTC
TCTCTGTCCTATCCAACAACGACAACAATAATAACTACAACAATAAAACAACAAGGGCAA
CAAAAGGGAATAAATAAATAAATAAAATGTTTTAAAGTTAAAAAAAAAGATTTTAAAAAT
GTCTTCCCATGTCATTGTACTTATTCTCCAGGGAGTACTTACATCAAAATCAACAATGAC
GCAAAAACTGAATTTAGTAGGTGCAACAGTTACAATTTTAACCTAACATTCTAGTACTTC
AATCAGTATTTTGTTGATTCTGTTTATCTAGTCGATATGATCAATTCTTGTTTTAGCTCT
TCTAGTTTTAATCAAATAAAACTAGATGGCTTTACAAATATGCCACAAGCAATGACTCAA
TTTTTTTTCTTTTTTTGCTATAACCATAGGAAAGGGGCTATTACTCTTGTTTTCTGGACA
GTCTAATTAATATTAGGGCACACCCAAGCACTTCATTTCAGAGAGGTGAAGCACATTTTT
AGTCTATTTAATCACATTAGTAACTTGCCAGCATTTTAGTTCAGCCAAAGATCAATTCAT
ATGAAAATTTTAAGTCCTTAGCTACATTTAAGAAATATAGAAAAGCAATCTAAAAGTTGA
CAAGCAAAATACTGACGAACCACCACCCCCTTCCCAAGCCAAAAAACAATGCAGGGAAAA
GGTTTTGGCAGTACGAAATTTCTTCCGCTGTAGTACAGCTAGCTCTTCCTCCCTAAAGCA
AAGAAACTGCCCAGTCTGGCCACCTAACAGCATGAGGCAGCCGTCATATGGCAGTGCTGT
GAGCACAGACTGTGGTTTGTGGCATTTGCAGTCATATAAAGACACATGGGCAGGGCTGCA
GTCCTGAACTCTAAAGAAACTGATGTGCTGAAATGCTCTTGAAATTTTATGCCTAGGAAA
ATCTTATAGCAGAAACGCGAGGATTGGGAGGCTTTTTTTTTTTTAAGGAAATACTGTGAT
TTGTTTCATATACAGAAAAACAGGAAGTGGTACAATATAAAACACATTTACACACCATCT
GTGTTCAGTTTTGTGATTTTTTTTTTCACTGAAGTAACTGCACTGGCCATGCCATTTTGA
AATTACAGATAGCATATTTTCTTTTACTTGTACATTTTTTGTGGTGTAGGTGGGGAGGGT
TGCTTAGTACATGTACAATTCCATCACTCCCAGACCAATTTGTGTGTGTGTGTGTGTGTG
TGTGTGTGTGTGTTCTCTCTCATTCTTTCCTGTTTCAGACAGAAAGGTAAAGACGGAGAA
GAGGAGACACCACAGCACCACTCTACTATTCATGGAGCTTTCCGTGTCGCTGTGGTATTT
CATGTGGTACTCATGTAATGAGCTTGCCCTGTCACATGAACTATCTCCAAGTCCCTCATA
TTTTCTTTTAAAGAATATGCATGTCTAAAAATAAAAACAAAAACCTTCCCCTCAAAATCA
GGAGACCATTTATTTGTTGTATACTAATCAAATTTTTCCAGCATAATTCAAATTACCTGT
GAATTATTTCTTTGTTCAGTCTGCCTTCCCCCTCTAGAAAATGCCTGATTTTTTTCCATC
CATGGTTTTTTCTGAGTTGCCTGGCAAGTTACATTGGACCAGTTTCCACCACCTATAATA
AAGATTTTGAAAAAATGACTTGTTCAGCAATGATGTCAAAAACCTAAACTAGTCCCTAAT
TTTGGGTACTGAAATTCAATCATCATAAACGCAATACTGGAAAACTTTCAGTAGCATTCC
AGCTCTAAGTAACACAAGTATCATGTTGCAAAAGACCTCCAACTGGTACTTCCTCAAGTT
TCTCAGCAAAACTTGATTTCCAAATTACNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNCCTGCAGCGGGCTGGTTGTTGCTGTGTTTGGGACTGCAGTAGCCACT
GTCGCTATCAATGTCAGCTTCACTAGCTCCCTGCTCACTAGAAGATTCTGCAGTGGGGTG
GGAGGCTCTTCTCCTCCTGCCCTTGGACTTCCAGAGCATTGTGGCAGAGCTTTCTGAGAG
AGACTTGTTAGCAATGTCTGATGGGAAATCTACAAAGCAAGGGAAATGGACAAATCATCA
GACTGATTTCTTCTTCAGTGATCATGAAGGCGCTTAGGAAAAGAAAGGTATCTAGCTTTG
TGAAGGAACGAAACTGGCCAAAACATGAACAGGACTGTCAAAAGTCAAGATGCTCCAAAC
AAATGAATTGATAACAAGTTTACTATGAAAACAGAATGTGTCTGTAACTTACAGAGACTA
AAACAAACTGCCATCACACAAGGATGAGAAGATCATCAATCTTTTGATGCTCAGGTCCTC
CTACGTGGTGTCCTCTTTTCCCAGAGACACCTCTAGTTGGAATTGGTCACCATTCCCTCG
CACTTATTATGACAGATTCCTCATGGATTTTAGCCATAAAAAGGAAGCCACAAAGTGTTG
CCATTGCTAACCTGATAAGAACGAGACCGTACTGTCCACCTTCTTCTAGAACTTGCTTCT
TCCCCAGTGAGTTTTACTGACTTTGAGATTCTGATACATGTCGCTGTGATTAATTTCTAC
CGCTGAAATACAGAACGCCTTCAATAGGAATATGCTGTGTTTGTCCTTTGAAGCACAGAT
AGAATGCTCACTGGTTGTTTGGAGGGCTGTGCTATTACAAATACTGTAACTATAAACACT
CTTTTTCTTTTTTAAATTATCTATTTATTTGGATAGACACAGCCAGAAATCGAGAGGGGG
GTTATGGAGATTGGGTGGTGGGAATTGTGTGGAGTTGTACCCCTCCTACCTTATGTTTTT
GTTCATTAATCCTTTCTTAAATAAAAAATAAAAAAAAAAAAAAGAAATCGAGAGGGAAGG
GGGTGACAGAGAGGGAAAAAGACAGAGAGACACCTGCAGCACTACTTCACCACTCACAAA
ACTTTCCCCCTGCAGGTGGGGGCCTGGGGCTTGAACCCAGGCCCTTGTGCACTGTAACAT
GTGTGCTCAACCAGGTGCGCCACCACCCGGCCCCTAAACACTTTTTTATCAATATAAAAT
GTATGTGTATACACGTGAACATTTGCTAAAGTCAATACCGTTGTCCTTAGCAGTATGTAG
CCTTAAGTAATATACTTACTCCAATTTACTCAGTAATACCAAATCATTTCCAAAGGTGTC
TATAATTGCTCACCTTCTAGAAGCAGGTTCTCAATGTTCCCATTCAACAAATACTTAATA
CTACCTTCTAGGCTATAATTTCTGCCAGTAGCTAGATATTAAAAAAGAAAAGTGGCTTAC
TGAAAATTTTAATTTGCATTGTCCTTATTAACAGTGAAACTGAACACCTTTTCTGATTTT
AGCCACTAATGTTTTTGCTTCTGTTCTTATTAGTTTTACTTCCGAATTGACTTCTGTTCC
CCCCCACCCCCCAACTGGGCTGTTTCTTACTTTGGTACTTTTATCAACTGCACTGAAGCT
AGAGCTCACCATGCGGGGTCATGCATGCATTGCCATTCAGGAGGCTCTGGTTGGATTGCC
AGTAGCACATGGGAAGTGCTATATCACAGAGGGCACTCCAGTGCACTGGTGTCTCTCTGC
TTACCTAATCAAAGCATCTCAGAGCAGCAAAACTGCCACAACCACGTTTGCACACATACA
AAATATTTTTTTTCCCCAGCAACCTCTGAATCCAAAAAAAAAAAAAAAAATCACAAAAAT
TTCCCTTTTCCACACTCTGACCAACATTAATACTGACTTGTTCTCTGTTATATTCATATG
TTCTTCATAACTATAAGTAAGAAGGCTCAGACAGCCTGGGAGATACTCACCTGGAAGGGG
AACATGTCTTGCCATGTGCAAGGTCCTGAGTTTAAGCCCTGGATAGTGGGCAAGCGCTAT
ACTATTTCTCCTTTCTGTCTTTCCCCATCTCCTCCCCTCAGCTTTCTAATAATGAATGAT
AGAATTAGCCTGGGGAGGTT
Chart Advanced