SelenoDB
Release 2.0
Chart Advanced
Promoter Report for SPR00001125_2.0
Identity
PromoterIodothyronine deiodinase (DI)
SpeciesGasterosteus aculeatus (Stickleback)
Promoter IDSPR00001125
Promoter release2.0
External IDNone
Transcript SPT00001060_2.0
Annotation
Prediction method(s)
Promoter prediction (5000bp upstream, N/A) [Report annotation error]
OrientationReverse
Structure gene structure

FeatureCol PromoterCol Coding exonCol Non coding exon (UTR)Col IntronCol SECIS
ResidueCol SecCol Cys or Other

ToolboxForward   Reverse    
Sequence
>SPR00001125_2.0 # Promoter # Iodothyronine deiodinase  (DI) # Stickleback (Gasterosteus aculeatus) Full length # Reverse
TCATGTCGTCCTCTTGGCGACAGGATGCGACCGGGCCGGCAGGAGAGGCAACAAGTACTT
AGTCCCCTTTAGTCATTGGAGAAAACTATTTAGCGCACGCAGGCACTCTTTTTATAGGTA
GGGGAGCATTTGAATAATGTGTGTGTGTGTGTGGTGGGGGGGGGGGGGAGAAACAGAAAG
AACACACACAAAAAAATCCCAAAACACGCCCACTCACATGGTGGGGATCACCTCCCGACC
ACTGCGGGCTGCAGGGGTATGGCGTTATATTTGTGCCACAATCCTGAGCGCGTAATTTTA
AGGTCCGCTCCTTTAGCGCACGTGTGGCCGCGCCGCCGAGCGGTGTTTTGTTGTTTTTGG
ACGCCCTTTGTGAGGTACTTGGTTTCGTTCTGATTACCGGTGGCTAAACGAAAGGTCGGT
CGTCAAAAGTCAGGGGGGGGGGGGAGTAAAGGAAAAGTGCGCCCTTGCGCGGTGCGCCGG
AGCCTCCGGGGCCACCAGACGGCGCTGGGCTCAAGCGCACCGCCGGGGCTCGTGTGCCGA
TGACTCATGGCGCCCGGGGCCCCTGCGCGCCTTGGAGAGGAATACGAGGCAGCGCAGAAA
CTGCCACCGGCGGCTTCACCAGTCAAAGGAGAGCCGGTAGATCCAGGTCGTCTAATCCCG
CCCCCGGTAAAGACGTGAACACGTGGTGCGGAGTGCAGCTCGTTTACTTACCATCCAGCA
GGTTGTGTCCCGTGGTCCACGGGGCCAAATCAAAACAAAAATCAGCCTTTTTTCAGCATG
GATTATATTTCCAATCTAATCTAATTCAAGGTTTTCAAGACCGTTCTTGAAAGTTTCATT
AATTTGAGATTCTTTTAAGAGATTTCCCGATCTCTATGTGGTAAATGCTTAATTTGTAAA
TATCCTCATTTTATTTTTATTTATTTTTTTTTGTTTTGTTTTGTACAGATTGTTTTCCTG
GACCGTATCTGTCAAATAAAAAAGAGAGTTTAAAAAGCAAGTGATGTGAATGTCAGTTTC
GTCTTTTCATTAAGTTGCCAAGCAACCGGCAGGGACTCAGGAAATTTGGTCCGACACTCT
AATTCTATCTTATTAACACTTTAGACTATTTATATGAATCAAACAAATAAAAATACCAAA
TAGTGTGTCGTTTTTTTTGCTTTAAATGTGCTGTATTTCCGTTATTTCTGTTCCCCTGTT
TCTACTCTTTGTGCTAAGCTAATTTGTTGTTGGCTGTAAATCTTTTTTAACAGATTGATC
ATGATTTCAACCTCTTTATTTAGAAGAAGAACTGAATATCTGTTTGAATAATTTACTTCA
AAATAAAACCCAAACGCCGAAAGCCCAAATCTTCAACCAGGATGTCGGTCTGTAAACTAT
ATCTTAGAAAACGCATCTGTTTCTTCCTCACAAATGGGTTTCATCTGCAGGGTTTTCTCG
GAAACTCTCCCCACTTAACGTCTTTTCGGTGATGTCACCGCCATCTCTCACGGTACGTCC
ATTGGAACCGACGCAGAACCAAACGCCAAACCCAACGAGGTAAGATTCAATTTCCGACGG
CACCCAAATTACGCGCGGCGGCCTCGGGTCTTCTTGTTGTTGTTGTCCAAAGACGACCGC
AGATAACACGGAGAGAAAAAACAGATCTGGTCACCAACCAGATGTGCACACGCGGAGCCT
CTGCTTTTGCACACACATCTGCAGGTAGGAAGTTGCTTTGTTTCTGAAACAAAGCAATAG
GGCCGCCAGGCGCCTCAAAAGGCCACTAAAGGGACACTTGAAGGGAGACGTGTAATCAGA
ATGGAAACCCTCTGGTTTGGCCCCAAGACATAAAAAAATAAGAAATCGATAATGTGAGCA
AAACGGAGCTCTACTGAACATACTGAAGATTAGATTTGTAGATCAGATGTGGTTTAACCG
CCCTTTGGACACTGATGTCTTGGCGAGCATCGCATGGACAAACGTTTCTCCCTCACGTGA
TCTTCACGTCGAGCAAATCGAAACTGCACTTTGGTCAGAACGTTTTCCGCTCAAATGGAC
GTGACTCAGATCCAAACGTGTGCGCGGAGAGACGAAGACACACCCGTCTCATTCTCACCC
CATCATGCGTGTACCTCAGCTTGGCACTGAGCAGTGAGAACGAGGCCGGATCAGAGTCAG
AATGACAAACTAAACCTGCAGATGAACTGGTTCTTATCTGATATCATAGCGTGCTGCAGA
TTCATTTGGCCTTCAGAGTCACTGAAATGTTGCCAGATGCATTCATGCCAGAGGTGAGAA
CCGCCACCCATCAAGCACAAAGGGCGTCAGACGTTCGCCCGAGGTGGAGAAACCGCTCGG
GGCTTCCTGTTAATTTGGTTTTCTCCAAGCCGAGTCTGTCAAACTGCCGCTCGTGAGGTC
ACCGCGGACGTGAACTCATTAACTCAAGCAAAGATTCCCAACGTACGAACGCTCAACACG
TAGGTCCCAGCTCCTCAAAGGACCTCGTCCACACACACACACACACACACACACACACAC
ACATACACGATGAATAAGACGCTGGCTTAGTTCAACATCCCAGATTATGCTGGCAAGGTG
CTCTGTCCTTCCTCCACCTTCACACCTTCAGCCGCCGCAACCTTTGATCCACCAGCTTTA
AGTTGTTGTTTTTTTCCCCTCCCACCTACATTCAACACAACAAACAAATGAACCGTTTCA
AAAATCTAAAATCTAAAGGCACACTGTTCTTTTGTGTCTCATTACGGGTTTCTTGGATCG
CTGTCACCGCATTATTTCCTAGAATAATCATAATCTGTTTGTTTTTTTCTTTCTCATGAA
GCCGTTTCCATTGTGTAAAAACCTCTTTCTCTGGACGCCACAATCCCACTAAGGCCACTT
TTCGCACAACGCAACCCGCTGGACAAGAATGGCCCAACGAAACACTGGCAGCCGGAGCCT
TGATTCCCTCTTATTTATTTATTTTCTCTCAAAAGAATTTTTTGTTTTTTTCAAACAAAC
TGCTTGAACCGTAACTTTCATCAGGCCCGGCCTGGATCTTGGCACGGCGGCGCGGGTCAT
ACGAGAACATCAGCGAGCAGGAAAAAAACAGGCTGCAGGAAAGCACCGCGGGCGGCAGCG
ATCCAGCCGAGCCGCCCTTTATACGCCAGCCACCACGTTGAATACACACCCCTCAGGTAG
AACACACACACACACACACACACACACACACACACACATTCCTGTAATTCTATGTTTGTG
TTGACACTCATGGGAGCAGCAATGCATTCCCTGGTCCATTACGTCAAAAGGCTCCACACC
CCCCGCCACCCCTCTAACTAACCCCAACCACAACCTCATCGTAACCAGACGCTGAACGCC
AAGTCAACGCACTCCAAAAATGCTTTTGAAGAAGTGAGGCCTGTCAAAAAGGACGCCACG
CCCAAGAAACGTCTTTCACAAGAAAGCGGCGATCCTGCTCGCTGTTTCACTCATGAATGT
TTTCACAAAGGACACCAACATTATGCAGCAAAAAAGAGCCACAATACTGGGCCCCACGGC
CCCCGAAGCAGGACGTCAGACCAAAGACAGGACGTCTTTCAACCTAGACGGGTCTGTTCG
CGCTGACCTTTCACAATAAAAGCCCCGGGTAGTTGTTCTTCTGCATGCGCAAACCAAAAA
GTGTTACAAATGTCGTGGAATTCCCATTGCTGCCGGTGTGAAACCGATGTGAAGTAATTT
GGGAGTAATTTTAAATGTTGAATCCTTTATTCTAACATTGTCTCTTGAAATATTGTAAGC
ACACTTACTTGGGCCACTTTAGGGATCCTACACACACACACACACACACACACACACACG
TTCATACACAGTTTTAGGGCTGTTTGTATTGACGTTGTCTCATTTCGTGTCGGCTACCAT
GTTGTGTGAAGTCCAAGGTTGGGTAAGGTTGCAATAAAAAGCACTAAATAGAAAACAGCC
CTGTCCCTCATGCTCGGCGGGCATTTGAGCAGGTTTTGTAGTTACTAAGCAACCGTCACG
TAGACCCTCTGAGGCTGATCCGTCCAGGCCGCGCCGAGCCCTCCATGCACGCTCATTCAT
CACCTTGGTTCACCAGCGTCTTTTGTCCAAAGGAGCAACGCTGATGCACCAAACTGCAGA
TCTTCAGAGAGGCCGGCGGCACGCAGCCTCGGCCGTTTGGCCCTGAAAAAGGAATAATCT
GTCGTATTGATGAAGATGGGGACCCTTGCTGGGGTTTATCAGTCGGGCCTCTTTGCACTC
TCCAGGCAGAAGCGCGTCGGCCGAGATCTGATGAGGTGATGCCGCGAACGAGTATCCTCA
AATGTCACCGCACAGCAGATTCCCCGCTAATCACGGCAATGCGATTTGGATTTGGACAGG
CATTTCGCATCGAGCTCAGAGCTGACCTCCAGCTTGACTCTCTGCGCTCCTAATCACAGT
GAAATGTCTGCTGTAGGAAATTGAGGTGTGATGGAAAAGAACCAACAAACCATCTGACGT
TTTTAGATGTACAAAGTTCGTGAACCTCTCTAACTGGCTGCTTTTATAGAAGGCATGTTC
GTGTTTTTTTTTCTTCTTTTTTTCCCCCCCCCAGCTCGTAAAGTGTGAATGGTCATGTTC
TTTGTTGTTTGGGTGAGCGCTTGCCGGAAGGTGTATTTTTGTGGTTGGGGGGTGCCGGTG
CCCATGTTTTGGTGAAGTAAATATGTAAGGGGTCTTGGTTGTAGGTGTGGAAGAACTGCC
GGGGTGCCGGTTGGGACCAACTCGGCCAACCGTTTCAGGTCACCGCACTTAGTTTGAGTA
ACCATCCTGGAGTTACAGAAATGTTTTCTAGGCTTTGTAGACAGTTGCAGATTTAAATGN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNN
Chart Advanced