SelenoDB
Release 2.0
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Promoter Report for SPR00001157_2.0
Identity
PromoterSelenoprotein O (SelO)
SpeciesGasterosteus aculeatus (Stickleback)
Promoter IDSPR00001157
Promoter release2.0
External IDNone
Transcript SPT00001092_2.0
Annotation
Prediction method(s)
Promoter prediction (5000bp upstream, N/A) [Report annotation error]
OrientationForward
Structure gene structure

FeatureCol PromoterCol Coding exonCol Non coding exon (UTR)Col IntronCol SECIS
ResidueCol SecCol Cys or Other

Toolbox
Sequence
>SPR00001157_2.0 # Promoter # Selenoprotein O (SelO) # Stickleback (Gasterosteus aculeatus) Full length # Forward
ACTCAATCGGGTGAAGAGTGAGTGCAGTTTTCAGTCTCAGCCATTCATTTAAGTTCAGAA
CATTTGCCCCCCCCCCCAAAACGATTACCACGGTCGCCGTTCAGGAAACCTGAATCCAGA
TGTGCACTAAAATCAGTATTTATATATATTTAAATATGGTATGTACCAAGTCAGCACCGG
GGATCCTTATGAACCAAACTCCCATTGTTCTTAAATCAACCCTTTCTTCCTCTGACGCTG
AGTCGGCGTGAACGCCCGAGTTGGTGGGGAGCTGCTCTGTTCACAGGTAGCTGCCTGAGG
CGCAGCCTGACGGAGGAGCCTCACTTGTCCCTCGTCAGCACCATCTCAGTGAGCCTGATG
AGGGCGTCTCGCTCCTCCGACGGCCTCAGCATGCTGACCTGCCGGATGGCTTCTTGACAG
TAGCGCTGGGCCAGGAATTGGGTCTGCTGCACGCCGTCACTCTGGAACACAAGAAGAAGA
TGGTGATGGGTTGTCCTCATCGGCTTTTTTTTAATCTTGTTTATTTTTCACAACGCGCTG
TTGGTCTCACCTGAAGGACGTACTGCCAGGCTCGATCGATGTCTCCTTCAGAGCTGAAGC
GTCTCATGATCAACGAATGGAGCTCAGGGAACTGAAAGAAATGAAAAGATAACGAGATCA
ATAGGTGGTGTGTGTGTGTGTGAGTGTGTATCCTAGTGACATAAAGTTTCATCTCTCTCA
CCTGTTGACAGGCGAAGAGGACCGGCCCAGTGGCCAGGCCCAGTTTGAGGTCCACAGCCG
AGGGCTTCCCCAGGTGACTGGCTCCTGATGTGAAGTCCAACACGTCGTCCACCAGCTGCA
AGTCGGACAGAAAGTGACCGACGGAAGCATTTTACATGCAGACATGAAGCGTGTTTAAAG
AGAGCGATTTTCTGTAGAATGGAGATTACCTGAAACGCGATGCCAACGTTCTCCCCGTAC
TTGTAGGCTATTTCATGAACCTTAGGATCAGAGGTGACCTGAACGCACACCTTGAATGAC
ACAGAAGAGAAAGTCAACAAAAGAAAAACGCTTCAGGGTAGCAAGCGAGTCTCTTCTTCA
GCGCCGCGATATTTGTGCCAAACAGAACGTACATACTGCTTTACAACTGTTTGCAATTAG
ACTCGCCGTCTTCTTGAAGGTTTTCTCCAGGTAGTGTTTGAATCGCTCGTTCTCGTTCTC
CTTGGAGCCGAGCTGCATGAACTCCCCTGGAAGCACACAGACACACACACACACACACAC
ACAGGGGGGTTTGGTAAGCAGACTAAGGGTCGTGACCCTAGCCTCTATTTAAAAAGAGGG
GTGACACAACAGCCTGCAGTGTGGAACATGAGCCATGCTCTTTTTATGTTAACATGTGGG
ACATGAGTCAAAACAGAATGATTAATCCATCCAGTACACATTTAAATACATTCATCCCAA
ATGTTCTTATCGTGCTAATGGGATCACTACGCTGCAGCTTCTCTTTATACGTTCTATGGT
TCCGACAGTTTGACGTTCGTAAGATGTAAAAACAGGAAAACTGATAAGTACAACTTTAAG
AAGGATTTCCGCACCTCGCACCAGATCCTCCATGATCTGAGACATCACCTTGACGACCGT
GTTGTCACCAATGCGAGCCATGGCCATGGAGGCCGTTGAAAGGATGAAATCTCCGGCTAA
GATGGCCTGGAAGAGAAGAGAACAAAAAAGAAACCGATGAATCTTTATATCTTTAAAAAA
ATATGAAGCGGAAAAGTAAAAAGTTATTAAGAGCATATTCGACTCACCTTTTTTTCCCCC
CACACCTCGTTGATGGTTCTCTTTCCCCGCCGTTTATCTGATCCGTCTATGACGTCGTCG
TGCACCAGGCTGGCGGTGTGGATCATTTCTGCGATCATCGCTATGGTCCTCTGCCCCGGC
AGCAGATCGCTGCAGAGGGAAGCCAGATCAAATAAAACCGTGCAATGTGCAAACATTTTG
TCGAAACGTCTGCAGGGATCCAATCATACCCGGATCTGTTGCTGTGAGCGTTGAGTGCCC
GGGCCATGAGGACAACAATCATCGGCCGGATGGCCTTCCCCTTGCCATCGAAGTAGTAGT
CACACAGCACCTTCAGCTCCTCTTTGGATACGAACAGCTCCTGTGAGGCGGAGGAACACA
ACGTGGGAACGTCTCCTCTTCGAGAGGACGACACATCGCCGGCTCGTATTTGCGTTGAAA
AAGTACCTTTCTGATGTCATCGTATAAGTTAGTTAAATCTTTCTGCGCTAACGTGAAGGG
GTCCTTTAGCTTCACGTCGGTGTGCGCGCTGCGTCTGCACCCGCAGGACTGCAGGGTCGG
ATTCAGCAGCCGCGGACTGCGCCTGGAGGAAGAGACCACAACAAACAGTAACCATCAATA
TATATATATATATATATATATATATATATATATACACAAAATACTTGTATGTTGCTGGAC
GTATGGTGTGTCGTCGCAGCCACGACTCACCTGGGTAGATATCTGATGGAGTTAAAGGTA
TTTGGTTGCATCTGTGTCGGTAAAGCCGATTGCTGCCCCTGAAGAACAGAGAAATCAGGC
TCATTGATTTGAGTTTCTGCTTTATTTACACGTCTTTAGCCTTTGTACAAGTTGCACATA
GTTCCGACTAAGAGGACAAAAGAAATAGAGATAGACAGATGCTGGTGTCTGGTTATCAGT
TTATTAGACAGGGACGGAGTTTGATAAACGTGGCTGCAAACTAACCCTCTTCTAAACCTT
CCTACCTTCCATGTAAGCGTTTATCACTTTTTGGCTGATTATGTTTTACTTATATGTTAC
AAATACACAGTCGTTTCTGTCTCTGAGTGTAGGAATTTACACTTATCAGCACGCATAATC
AAGAAACAATGATCACACTCTTAAGTAGCTTAAATGAATTAAATGGATGAGAAAACCAAG
AAGCAACACGTGAATGGACGTTGACTTTGGTCAGACTTTAAGGGGACAACCCGCAGCAGG
AGGTCCGTTCCTCTGCTCCTTTAGGAGCAGGTCCTGACCTTTGAGGGAGTTCTGAACACA
ACGTCCCCGTTCGTTTACCGCACTCTTAAAAAAAACCAACGGCTCAAATGTGTAACATCC
CCGTCACGTCAGTAACGTCGAGACGCCGGTTTAGCGGGGAAATAACCCCCATTCATTCCC
TAACCGCTCCGCGGTGACCTTCCCGGGGCTGCACCCCTCAGCCGGCGGGGACTCACCTCG
CTCCCCGGCCCGGGGCTCCGCGGCGTCCGCCAGAGGGAGGCCGCGGAGAACGACGCCGAC
CGGCCGTTGACGCGCCTCAAGGTCTCCAGTAGCCCGGCGCCGGTACACTTCGTGCTCCAC
CGCCTGCACTGCCTGAGCCACGGGGACGCCATGTTTCCCGTACCGCCGGGGCGTCACACG
GCGACGGACGACGGGTTAGGTAACACACCGGAAGCGGAAGTCGGTAACAGTTGGTGACGT
CAGTTCCCTGCGAGGAGCTAACTGCCAGTGGCAGTGACGTTAGACGCGATCTCAGACAAA
CATCATTGATTTCCTCCCCAAGAGACGATTTTATTAACAGAAATGCAGCGGTACATGTCA
CCTAGCGGGTCTCCCCCTTAAAACTGTAGATATAAAATACGTATTACTACCGTGTATCCG
GGAGAGTGGCTCGGAGTAGAGTAGTACGCTGTATTTGTGGCTAGCGTCAGTAGCACTGAT
GCTAACAGCTAGCTGGCTGCAGCTAAGTTAGCTAACGTTATGTTATGACTTTAAAACTGT
TAAATCCCTTGATGTCTAGAACCTTTTCGTAGAAACAATCCATAACTAACGAACTATTAG
CGAACCCATTTAAGCACTATTAACGTGAGATGTCATATGCACACAAGGCTTGCTGGGGCG
GGACAGTTTAATTAAATATTAAATAAATAATTTGAGTTGCTTGTACTTTGCATGAGTATG
AACATCCAAAGCTACCTGGCAGTTTTAAAGTAACTACCATTTTTATGAGTAACATGCTTT
AATTTCACCATCAAAGCCTAAATTTAATGAGGTTGTATAGATTCACTAAGCAAATAGTTA
TGCTCCAAGTAAATTAAACCTACTCTTACTGATGAAAAGATGTTAATACTTTTACAGCAC
CAGAGTTCTCATAATTGAGCCATTTTAAAATCCTCATCAGCGCTTCCAGGAAGGTGTCTG
CGTTCCGGGCGGAACATGTTCCCCTTCAGAGTGATGCTCTTTGCTCTGGTAGCAGCATCC
AGTTTCACACCCGTCTGTGTGCTGCAGTTCTGCACCGACGGCGACGGCGACTGCCACCGT
CACGACGCTACGGCATCGAGCAGCCGGCCTCCAAACACTTTCACGTCCAGGTGGAACGCA
AGCGCTTCAAACCTGGACCGGTTCAGAGTGTCCTGCAAGAAGCTGATAGGTACACACACA
GGGGAGACCCGCGTCTGTTTAAGTTAGTACGCCCCCAGTCACTGTAACAATTCAACCGTT
TCCGTCCTCTCTGCAGAAGCGTTCCCCATCGATGAGGGCGGAGGGAACTACGCCCGCTCC
GTAAAGAACTGCATATTCTCCAAATCCACTCCAACTCCCCTGAAAGGCCCGTTGAGGCTG
GCAGCAGCTTCCAAGGTGTGGTTACAACATCAGCAGAGTCCGTCCCGTGAAATTGTGGCG
AGGACTTCATACCTGCATTTGTCTCGTCAGGAGGTCATGGAGGACATACTAGACTTAGAC
GTGGCCGTGACCCGGTCGGATGACTTCCTGCTCTACGCCAGCGGAGGCAGACTTCCACCG
GGATCAGCGCCACTGGCTCACAGATACGGCGGCCATCAGGTAACGGTTCATCGTCAACTC
GGGACTAGATCAGCTAAAAACTGGAGAGGTCAAGGAGGCTTGGACGTCTCTTTTAAAGTT
CCTCTATGATAATTACATCTGGGACTACATCTGATCGCAGGGGACGACTTTGAAATGTGT
TGATGAACAGCCTGTCTCAT
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