SelenoDB
Release 2.0
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Promoter Report for SPR00001173_2.0
Identity
PromoterSelenoprotein W (SelW)
SpeciesGasterosteus aculeatus (Stickleback)
Promoter IDSPR00001173
Promoter release2.0
External IDNone
Transcript SPT00001108_2.0
Annotation
Prediction method(s)
Promoter prediction (5000bp upstream, N/A) [Report annotation error]
OrientationReverse
Structure gene structure

FeatureCol PromoterCol Coding exonCol Non coding exon (UTR)Col IntronCol SECIS
ResidueCol SecCol Cys or Other

ToolboxForward   Reverse    
Sequence
>SPR00001173_2.0 # Promoter # Selenoprotein W (SelW) # Stickleback (Gasterosteus aculeatus) Full length # Reverse
CACTGCGTGAGGAACAAGTTATTGATTAAAAACAAGAAGAGCAGTTACACCTGGCTCCAT
GCTAGCCGTGAGCTAACGATGCTAACGTGCCGCAACAGTCCATTCAGTGGGATTTACGGC
AAGGACCCCCCTCCCAAAAAACAAGCAGCAGGTTAGCTGTACAGTCACACAAGGAAGGGA
AACGATAAAAGACTGAGTTACCAGTATTCCACTCTAATTGTCACCCCCATTGTTCGCTTT
TCTTCGTGCCGTCTGTCTCAGCGGTACAAAGCTGTGCGCGGTGCCGTGTGTTAGCTGGTT
TTGTAACACGGAGCCGGGCAACGGGGCGGAGCTTAAACCGGGAGACATTAGTGAAACCGG
AACCAAATCAAGGGGGCGGGGGGTTTAAGTCGCAAAGTGATGGATTAAATGCTTGCATTT
GAAATGTAACATTAGCTGAGGACAACGCCTCACTACATTTATGCCGTATTTATTTGTTCT
TTCCACCCCACCGCATTTGTTGGTAATGTTTCAGCTTATGTGGCTAATGTGGCAAATGTC
TCCTGACCTTTTTGGATTGTGCTCCCTGACAAATAAAATCTACTTTTAGTTAGCCCCCTT
TTGAAAACGTCCAGGTGTCCATCAGAGCCAAAAAATCACCCCTTTTACATTAAAAAATGG
GAATAAATGTTATTTTTTCTTCCTCCCTCTCCCATGAATCAAGCAATGTTGGGATGGGGA
ACAATGTGCAGCCGGCATCGGTCACACTGCTCACAAATTGTTTTTGCCTCGTGGCTCCAG
AACAAAATAATGTCAGACACTTTTGTTGAAAATATCTCGTGGTTAGCTGATAGTTTTAAC
AACTGTGAACGACTCCATGACATGACACTTTTAGAGTTACCAATCAAATAACATCAGTAT
CGTTGCTTGTACTGATACTTTCTTCACTTATACACAAAATAGTAACATTTGGTGGTTTAA
ATTACAAAAGCTAATCCTATTGAATGTTCATTTTTTGTAAATTCTAAATCGGTAAATGTA
ACTAAATCATTGATTTAATGAAAGATATACTCAAACAGAGACAAGTACCTTAAATAGATC
TACTATCTAGTAGTATCTACTTGAGTACTTCAATTAATGACTCTCAGAAAAGCTCAGTTA
TGAATATTTTCATGCTGTCCTGCTCATATTTACTGTCTCGTATTTGGATGATTTATTCCT
AGATGCAATGAGGATGTTATTATGTTATTATTTTAATAACATAGTAACAGTAAATGTGAT
TGTACAAACCGTCCTGCGTTTGGTAAATGGTAAACAAAGCACAGACTCTTCTGGACTGTT
GACCTGCAGCTGACAGGTGTGGTCCACTCAGTGACGTATTACTCATTACAGACAACCTTC
AGCCTCATAAACCTGTAAAACACAAACTTCGTCTCACAGTATCCCTCCCTCAACAGGAAG
CTTTGTTCTCATTTTAGACCAAGAACACAGGCACATGTGGACGTGAAAGTAGAGTAAATG
ATGTTTAATTTAAAGTCTTCCTGCTTTTAGATGGTACAACATGTGACATGGCAACCAGCG
AGCCGGCAGCATGTAAGTTTGACACTTTATGTCAGCTTTTCCTATTCATGTAGTCGTTAT
AAGTTTTCAATGTCTTCCTAATATCTAAAATTCGATTGTATTTGATTTTTTATTGCCACA
TTTTGACCTTTTTTCATCTCATACGTATTTTGTGTATTATAATGTCAGCATGTATCATCT
AAATTATTACATTTCTATATAATTGTAAAAGTGTGATATGATTTAACAAAGTTCAGAAGT
AAAAATTAAACTGAGAATAAAATGGTTTATCTGGCTTTGGGCCCCAAACACCTGCAGAGA
TATTTAACTTTTTGATTGATTATCTAAATTGTTGGGGCTTTATTGTCATACAAACTATTA
GACAAAGAAAGAAATACAGTAAATATTCCAATTGTATAACCTTAAACTTTAAACTGCTCA
AGATCCATCGGATTTGAGTCCTTAAAGCTTTAATTGAAATCTTCATGGTGTCAGTGGACG
GCTGCTCTGCTGCACCACAGTTGAAGATCGTCCTCCTCGGGGGCCGAAACTGTGAGAAGA
GCTGTCTGGGGAACCTCATCCTGGGCAAAGAGGAGTTTGTCCCCCGAGAGAGGACCTCGT
GCTGCAGGCGCCTGGGCGTGGTGGCCGGACGCCGGGTCACCGTGGTGGACACTCCCGGCT
GGTGGTGCGACTTCAGCTCCCGGGACACGCCCGAGCTGGTGAAGCGGGAGATCGTGAGCA
GCGTCGCCCTGTGCGCCCCGGGGCCGCACGCCTTTCTCCTCACCGTCAAGGCGAGCGCGC
TCTTCTCGGAGAAGCGCCGCAGGGCCGTGGAGGAGCACGTGTCCCTGCTGGGGGAGAAGG
TGTGGAGCCACTGCGTGCTGGTCCTCGTCTCCGCCGACCGCCGGGAGCTCGCGCGCGGCG
GCGGCGCGGAGGCCCTCCGCTGGCTCGCCGGGAAGTGCGGCCACAGGTGCCGCCGCGTGG
TCTCGGGGGACGTCGGCGCGGTCGGCGGGCTGCTGGAGGAGATCCAGAAACTCGTCACGC
GCAATGGAAACGGAGTGTTTGAGGTGCGGGGGAGCGTCGCGCGCGCGACCGCGGAGGAGA
AGAGGAGGGTGGAGGAAAGGGCTCGGCGGAGGTTCGTGATGGCGAAGGAGCACAGATCTC
TGATGAGAGGCGAGTTCATCGGTATCATTAACGTCTCAACAACTTGGCAAGCTAATTGTT
TTGTTTTATTGGGGAAACTAGTAGTGATCATTTAACCCAGGGGTCCCCAACCACCGGGCC
GCGGACCGGTACCGGTCGTGACCGGATTCTCTCCTAATTACGTGCGCTCATCCTTTGACA
TATTTCACAAGCGTCACCAGGCGTTTCTTCACCTTACACATTGCCCAAATTGATTGGGGA
CCCCATGTCTAAAGTGCATTTCCCTACTTGCAAATGAATAAATGAATGTTGATAAGAAAT
CACACAAGTCTGATAAACTTGCTTCATTCTTCCAGAGAGTTTGCGGCCCGTGAGCTCTAT
CCGGATTGTGTTGGTGGGAGCCAAGGGTTCTGGGAAAAGCTCCACCATGGACACAATCCT
GAGCACAGAGAGCGGCCAGCGAGTGCGCAGAACGGCCCGGTGCGTGGTGGGGACGGGCCC
GGTGTTTGGGAGGCAGGTGACCGTGGTGGACACGCCGGGCTGGTGGGCGAACTACTTCTG
TGCCGAGAGTCCCGTCTTCGACCGGAGGGAGCTGGCGCTCGGCGCGTCTCTCTGCCCTCC
GGGGCCCAACGTGGTCCTGCTGGTGATCCGCGCGGACCGAGCCTTCTCCGAAACCCACTG
GAGGGCAGCGGAGGAGCACATGCGGCTCATCGGCGAGCGCGCGTGGAGGCGCGTCATCGT
GCTGTTGAGTTGCGGGGACTGGCTGGCGGGCACGACGGCCGAGCAGTGCGTGGAGAGCGA
GGCAGGGCCTCTGCGGGGTCTCGTGGAGAGATGCGGCAACAGGTGCCACGTCCTGAACAA
CAAAACCAGAGGGGATCAAGGCCATCAAGTCAGAGAGCTGATCCTGAAGATCGAGGAGAT
GTTGGCCGGCCGCAGCGGCCGCCAGCATATCGAAGTGGAGAGGCCAGTGGTGGAACAGCT
GGAGGAGGAGAGGAGGAGAGAGGGGGCGCGAGCGATGGAGAGGCTGGCGAGGAGGGAGAG
GCAAAGGCAGATGGCGAGGTCTCAGCTGGGTGAGTTGGATTCGTTTAAAAGTGACAATGT
GGGCTTGAATAAACACAATTTGGATTTAGATGCTTTTTTTGCTTAGATTCTTTGGGACAA
AATGTAACCGTGGAGGGTTTTCTTTGATGTGTACACCTCCTTTCCGACAGAGAAGCTCAA
CGCCATCACAGAACTGAGAATAGTGCTCATAGGCGGCAGGAAAACCGGTAAGAGCTCGTG
TGGGGACACCATCCTCAACAGAGAGCGCTCCCACGCGGGGAACCGCACCACTTCCTGCTG
GGAAAAACCAGCCACGATCGGCGGCAAGACGGTGGTGGTGCTGGACACACCGGCCCGCTT
CAACGCGACCCCTGACCTCCTCCGCCCGGCGTCCTGCGCCATCCTCCCCGTGGTCAACGT
GAGCTCCTCGTTCAGCGCCGACCACTTGGAGGCCATGGAGAAACAGCTGGAGGCCGGAGG
AGGCCAGATGTGGCGCACAGCCGCGGTGCTGTTCAGCCACGGCGACTGGCTGGGCGACAC
GAGCATCGAGCAGCGCATCGAGAGCGAAGGAGAGCCGCTGCGGAGGCTGGTGGAGCGGTG
CGGGAACAGGTACCACGTCTTGGATAATAAGCACCGGGCGGACGGGGCTCAGGTCAACGA
GCTCATCGCCCTGATCGAGGAGACGCTGGTTGAAGACGCGCCGGTCGTCCTCCGCGGAGG
GGATCGCGTGACACAGGGTGTGACCCGGCGTGACAAGGATCGAAAGAGGATCACGATCTG
CAGACATCAGGTGTCCCCGTCAGCGTAAGTAAATGTGATTCATTGGGTGCTTTCTCCCCG
ATGGAAGATATTACATATTGAAAGAGGAGTGGAAAAGGGCTGGTAACATGTTCCACTTCT
TTCAGAAGGTGTGGAAATAGGCGTATAAGTCTGAGTCCACGTGAATGGAGGGATATTAAA
ATCCAGGGACCTGAAGGGAGGGGCAGAATGTGGGCACTGCACATTAATAAACAAGGTTTT
AAAAAGAGCAAGAATCAAATGACATGGAAATAGAAATAGTATTAAGGAATATGCATCATA
CAAAACATCAGGTGTCGCGTGCCGTCACATTCCGCATCGTGTGGCAGGATCAAATCTACA
CTAGTTTATGGTATAAACAGGGAGGAAGCAGCACCTGTTAGAGGGAGATAAGGAGATTCA
TATCTTAGAACGGGTGGAGACGGTTGTTAGAATTGTTTATGGCTCGCGTGAAGTCTGTCT
GCCCGTTGTCTCCTTTGCAG
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