SelenoDB
Release 2.0
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Promoter Report for SPR00001175_2.0
Identity
PromoterThioredoxin reductase 3 (TR3)
SpeciesGasterosteus aculeatus (Stickleback)
Promoter IDSPR00001175
Promoter release2.0
External IDNone
Transcript SPT00001110_2.0
Annotation
Prediction method(s)
Promoter prediction (5000bp upstream, N/A) [Report annotation error]
OrientationReverse
Structure gene structure

FeatureCol PromoterCol Coding exonCol Non coding exon (UTR)Col IntronCol SECIS
ResidueCol SecCol Cys or Other

ToolboxForward   Reverse    
Sequence
>SPR00001175_2.0 # Promoter # Thioredoxin reductase 3 (TR3) # Stickleback (Gasterosteus aculeatus) Full length # Reverse
TTATCGAGGTGCGTCCTTCTCCCGGGACAGCGCAAGCTTTAACAGACGGCTTACGAGGAA
AGTATACCACCACACCTGGACGTTTACCGCACCGAGTCTCTCCCTGACACCGCACGGACG
CCTCTGGCTCGCTTCTCCAAGAGAACAACGCTATAAAACTAAGGTCGACCGCGGTTGCTC
TCCCTCCGCTGTCAGCCGCTCTTCTACCGTCCGTCCGCGCCGAGCGTCTTTTACCTTGTC
TTGCTCGCGTTGCTTTGGGTGCGCTCGATCCTCTCACCGTGTCACCGCATATTCCGTATG
CTCATTGTCGTGAAGAGAAGGAACTCCGCCCACGCGGTCTACCGCGAACAACAAAACGTT
CGTATCTATACAAACGTCACAAGGGCTGCCTATTTACATGCCGTAACAGCACAGGAACTA
TTGTTATATATATTCGGAATTAATTAAAAGTATCAGGCGCGTGTTTTTATTAAAAACGAC
ATGATGCTAATGAAATGACAGGCCTATAGCTGATCTACATTTAGGAAAAAAGTGAAGGCG
AGAGGAGCATTTCTTTTTGCAGTGTATTACTGATAGCATTCAAGTTCAGAGCATGCCAGA
TGTATATTCCAACATTGCGTTATGACTTGTGGTTATGTAGCGCCATCTGCCAGTGAAATA
ACGCAATGACAAGACACGGTGGTTTTATGTCTGATCCGACTATGTATCCCCACTATCACC
TCCGTTAGCATTAACTTCCAAATGTTAATTTGGAGAATACTGTACTGTAGATATAATGCG
GTGTGGAGACACCCCATTTAGACCACCTATCAAATAAATTCTGATACATAGTAAATATTT
TACTATTGTCTCAAACAATGAGAAAGTGTGTCCACACTTTTGACTGTTACTGTATATTTA
GAAAATATCATTTCTAAATATCATTTAAATATTAATCATATGACTATTACTGTCATCATA
ACCCGACATTATGTCTTTGTGCTCACCCTCCCCACAGGCTTATGTGGATGGTGGTTCTAT
CTGATGGTGGTTTTCCCTGCCGTACACCTGGCTCACTACTCACAATTATTTGAATCATTT
CTGTTATATGAATGTAATGTATTGTACATCTTTTATATTGTTCATTCTGTCGCATGACAT
CTATTGTAGTCTGTCCATCCCGGGAGAGGGATCCTCCTCTGACGTTCTCCCTAAGGTTTC
TTGCCTTTTCAACCCCATTTTCCCTATTTTTCATTTTTTGGGGAGTTTTTCCTGTGCCAA
TGTGAGGGTTTATGCACCTGCCTACTTTTGTTTAAGTAATTATTGCACACTTTCTGTAAA
TCCTATAAACTTCATTTCACTTCTTAAATATCACTGTGTTTGTCTGCTGTATGATATATT
TAATTGAAATTGCTGTTCAATGATACATAAAGGAAAATCTTGAAAATGATCAGGGGTGCC
CAAACTTTTTCCTTCCACTGTACATATATAATATTAAGCGAGATGCAACTCCCCCTAGTC
CTTTTGTCTGTCTTCATGGTTGTTTTGTGCATTTATCTCATTTCTTTTTATAGTCACATT
TGTTGTTGTTTTGTGTCTCTTTGTGGTCACGTTGTGTTTTTTGAGGTTATTTTGTGTCTT
TTTGTAGTTCCATCGTTTTTCTTTGTGATCGTTTTGTTGTCTTGTAGTATTAATGCTGTG
CCTCTTTGTGGTTGTTTTTTTTGGTTTTGTTTGTTGTCATGCTGTGTCCCTTTCTTTGAC
ATTTAGCGGTTTCCCGTGGGGACTCTGGCTCTGTTGTATATTGCTTTTGAGTGTATAATG
TAATATATAATATAATTTATTTTGTCTTATAGCAACAAACTGCCTGTACCAAAAGCATGA
GGGGCTTTTACACACACATATATAATAATAATAATAATAATAATACAATATTTATGTCAG
GAGGATGGGGAGCTACGGGTTAATAAAACAGGTAACTTCTATGTTACATTAGGAGCAAAA
CAAATCGTTTAAATAATAAACGGAAGTGTCAACAATGGCCAACTGGGAAAATTGTAGCCA
AAGAGCTGATCATACACGGCTGATGAAAGGCCTTATAAATCCATATCCGACATGGTGACG
TGACAAGAAATCGCTTCATTTTAATTAATTTGTGATTCATGAAATCCAACAAGGAAAAAA
CCGGAACCTTTAAGTCGCACTCGAAGGCCGTCGCTGAATCAGAGACGCGTCATCGCAGAG
ACGCAATCAAACTCACCGCGTAATTAACAGGTGAGTGTGGTTGGATGACGTCACCGTCAC
GCGGACCTGTTTGTTCGACGGGTTCGGACGCGCAGAGACTTCCCGGTACTCCTTCTGCGA
CGGGCGTGAACCTCCTGTTCGGCGGGTTGCACTAAAAGCGCTTCCCTGCCTGTGTGTGCG
TGTATGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGCGTGAGTGCGCGAGGGCGCGCGAC
AGTCGTGTTGTTGCTCCTCCTCCGTCCTGCCGCGGTGAACTTAAGCCGCTCGCGAGGCGC
TCGCGCGACAGTCTCTCGGGAGGAAGCGGAGAAAAGGGGGAGGAAAATACGTTCTAAAGG
AAAAAGTTAACGATGGCAGAGAACAAGGCGGGACCCAACCTCCAGGCTGGAGCTGGATTC
CTCGCCAAACGGGTCCAGAAGTCTCTGAACCGAGCCCAGGAGAAGGTGAGTCTCAGTCCA
GCTGGATCTGGCACGCCAGCCTCATCCAGCTGCCGCGTTGAACTCCTTGGATGCCTTTTC
CTCGAGATCGGGCCTCCTGGAAGGTCTTCCATGTAGCAGAATGTGAGGCATGTCTGAGGG
GAGGGTTCAGTTTCCAGCACTGAAACAAACGTGGACAAGCTGCTCATTCAGAGAGCGTTC
AATCTATGCAAATGTTGTTTGCTTTAGCATGAATCTGGCAAATGAGTAAACCGGGACAAC
TTGGGAAACATGTTGTTGTGACGTAGTTTGGGTTTCCCATCTTACAGTTTCAACCCCGAG
ATGCAACGCACCCATGTGATAAAAGTCATGCAACGGAAAGTGAGAACCTGTGCGACGTGC
TGGCTATGGTGCGGGTGAAAAAAGGTTGAATAAAACACCCCACTTAGCGAGGGAACCGCA
TGCTTTGTTTCCAACAGTCTACTTTTAAACGATCCGTTCTAAACCAGCAGTTTGGACTTT
CCCCGTCCATCTGAGTGTAAAAGCGTTGTGCGCCGCTTCACAAAAAAAGCTGCCACTTCC
TGACTGCACTTCCTCTCTCGCTTGGCTGAACCTTTTTCTCCCTCCAAGTTTGTGGTCGAC
TTGTTTGATTTCACTGCTCCACCTTCCAAACAGCAGCTACGCTCTGCGTGCAGCCTGTAG
TCTGCAGGGTTTTTGAGGTCTGAGTGCATTTTTCATTGGCAATCCTGGAAAATGGATGCG
ATAAAACAAGACTTTTTGTTGCAGACTCAGAGTCGAAGGTCGCGCTGTCCGGGGGTATTC
TGGTTCAACACCAACAGCTGCGTGCACAGTTGTCTGTGAGAGACAATGGAACGGTTGGCC
TTGTGCGTAGGAGTTCGCGGGACTCTTATGTGGAGCACGGGACAGCTTGATCCTAACAGC
CTATGCATCCTGACAACACTTATTTATTTCTGTCCCCCATCTAATTTGCTGACCTTTGCA
CTGAAGTATCTGATGTGCGCTGTAATGGGCCAATGTGTCGGCCTGCTCAGTGTTCGAGTC
AGAAGGCGCACACCCCTTTAACGCTGTCATGAAAAATGGCAAAATCAATGCAGCAGAAGT
GGAGACGACATTTCTCTTATCTTTCTGGTCCAAGCCCTCTTTCTGTCTTGTTGGAACCTG
GTGCCTACATTACCCACAATGCAGTTGAAAATAGATTGAGACACATGGATCGTGGGGCCT
CTCGCCTGACTTTTCCACATATACAGCAGTCCCCCCCCCCCCCCCTCCTCCCAACACCTG
CAAACCGACTTCGTTGAGTCCCATTGAGCTCCCTTTTAATCATTAGCTCTATAATAATCA
TCTCGTGCAAAGGAGCCGTTGTCTATTTAATGTTGCTGACTCTGCTTTCCTCCATCAGGT
TCTTCAAAAACTGGGCAAAACCATGGAGACCAAGGATGAGCAGTTTGAGCTGTGTTTCCA
GAGCCTCAACAAACAACAGGTAGTGAGACATGCGCAAACGTCAGGTGGTCTCCGGGAGCG
GCGACCCCGCTGACCTTCTCTCAAAGGTCATGCATGCCGCTGGGCTTCATTTCACTTTTA
TTTTATAGTTAAACAGCATTTTCTTTTTTCTCTTTCGATGCCGCACCACCATTCCCAGTT
AAACGGGGCACTGCAGAGTCTTCAAAAACTATTGAGCTGTTAGTTCCTTCTGCTGAGGTG
CCGATTCACGAGCTCAGCGATCTGCTCAGCCTTGACAACAGGAAACGCTCGCAGCAAGAT
GTTCCTGCCTTATTTTCTTATCTACTTCTCATAAATACTTTGTTTTGTCTCCAGCTTTCT
TGGTACACACAAGCAGCCGTGATACTAAAATGAATTTTATACACGTGTATGCTCGTATTC
ATGAAGTCATCCAGTTTAACTGCAGTACATATTGGAGGGAGACCAACAGGAGGGAAGTCT
ACGCACGCCGCTTTCACTTTAACTGCACATTGCACGTGTGTTGATTTTAATTCAAACGCC
ACAATGTGGTTGGACAGCCGAGTATCGCGCGCTGCGTGCAGCTCTGAACTTGTCACGCTG
AGTCGTGTTGTGAACAGAAGACGCCGAGGCGGCTGAGGAAGTGACCCAGCGCAAATGGAT
GGGGGCAACTGTTTCTGGGCGTTGCCGAAATCTGACCAACTTGCGCCTTCTGCTCTGCGT
CCCTCACAGGTCGATGCAAGCAGGTTGTTCAAAGATGTCAAAGCCCACCACGCAGCAGTG
AAAGGTAGGACGCAGCGCTGGACCAGAACGCCGCCCGTTAGCCCGGGAGAGTCTTGGAAT
AATGGGGAAGTGGAATTATT
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