SelenoDB
Release 2.0
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Promoter Report for SPR00001241_2.0
Identity
PromoterGlutathione peroxidase 6 (GPx6)
SpeciesIctidomys tridecemlineatus (Squirrel)
Promoter IDSPR00001241
Promoter release2.0
External IDNone
Transcript SPT00001176_2.0
Annotation
Prediction method(s)
Promoter prediction (5000bp upstream, N/A) [Report annotation error]
OrientationForward
Structure gene structure

FeatureCol PromoterCol Coding exonCol Non coding exon (UTR)Col IntronCol SECIS
ResidueCol SecCol Cys or Other

Toolbox
Sequence
>SPR00001241_2.0 # Promoter # Glutathione peroxidase 6 (GPx6) # Squirrel (Ictidomys tridecemlineatus) Full length # Forward
ATTTAGTCATTCCACAATGTATATATGCTTCAAAATAATCTATCAAACATGGAAAATAAA
ATTTTATTAATTAGAAAAATAATTTTACAAATGAATTATTTATTTTTTACTTCAATTTAT
TTGTTTTAGTTAGGTTTCCCACAAGATTTTTTGAACATATACTGTAGACTTCTAACTTCT
TAGCCAAGTAGGAAAGAAAGAAACTAGCACTGGAGACCAGTCTCTGTTCCCTGCCACAGA
GTTACAGTTACCATCCCTCCTGAGTGCCCATCTCAGTGTCTACTCTAGAAAAATAATTTT
TAAAAAGGAATAAAATTGAAAGGCAGTCTCATGACCCTTTCCTGACATCACTGCAACTTG
TAGCCTCCATTGTCATATATCTCCTTGTCTTGTGTAGTAAGCTCTCCCCCTGCCTCCAAG
GATACATGTGATTGCATTTAAGGCCCAGCCAGATAATCCAGGATAATCCATCCACCTCAA
AATCCTTATTTTAATCACACTTAAAAAAGTATTTGCTGTATTAGATAACATTTACAGATT
CCAGGGATTAAAACCTGATATTTGTGGGGACCATTATTTACCCTGGAAGAGTTTGGATTG
GAGATGAGAACACACTCAAGTATGAGTCCCAGTTTGATATTATTACTAGATCTATAACTT
TGGGAAAATATTTATTTTTACATTTGTAAATTGGGAAATTATAGCCTAAGATTCAGCCAT
TCTTTGAATTGAGAAAGGTTCAAGAGGTTGGGAATATGCCACAAGAGGTAAGACTTCTGC
ATGAGTGACTAAATGCCTTAGGGACCTGCATAGATGGATCAGGTATCAGCGATCAAGCCA
TAGATTACAGGTCTTTGAGAAGAGCTCAGAAATCTGAGATAACAAAAACCTTGTCTTCCA
AGAGAGTTCACAAGAATTCAGTTCACCCAGACTTAAGTTCCAAGAGGCAGTTTAAGGCCT
TTTGTGAACCTGGAAGAGGCAGGGCAAGTGGAGGGGGCTGGATGACAATAGGCTTAGAGC
TGAAAAGGAAGAATTTTCAACTAACAAGGGTTTCATAACCTAAGCTGGCAGTGAAAACCA
GATAGATGATAGCAGAGAGGAAGAGGAGGTAGCTAGGGAAAACAGCTCTATACCACTTCC
CAGTCCAAATTCTTTGCAACAGCTGTCTGGTTGTTATCTTATTAGTACCTCACAATAATG
GCTTATAGCAGAGGATGAATCTCAAGTCCAGGATAGTTCCCTAACTCGGACTTTAAAGTT
TTCTCCTTGACAACTTTCTACTGTGTATGTGTACCCTCATTTGTGCTACTCCTGCAATAA
CAAACCCTTCTCCAGGGGAAGGGCTTCTGGTCAGAATCTGAGACACTCAGGCTCCCACAC
TGGACTTCATAATTAGAAAACATAATGATCTGTCTGAGTCTTGGAAGTTTGAGGGGAAAG
GACAAAGGATAAATAGTCATCTGAGGTAAATATCTTAAAACTTAGTTTGCATACAAATTA
TGTGAGGATTTTTTTTAAACAAAATCCTTTTTAACAAAAGCATATTCTGATTCAGTGGAG
ATGGTTTTGCTTCCTGAATACGGAGCCAATCACTTAGGGGAATTGCCAGTCACTTGGAGA
GAGGAGGGATAGTGCCTCAGGTTCCAAAGAAGGAAGCTTTCACCTTCAAGATTGGAACAC
GTGCAGGTCTCACATCCCAAAGGGGCAGGGATGGAGAGGTGGGAAGGAGAAAAAGGAAGA
GAGAGGGAGTGAGAGTGGGTGTGTATGAATGCTGCTCTGAGATTGGATGGCATATTTTCA
AACTGGTGGCTGCCAGGGACTCAAAAGTGGCCAAGATTCTAGGGGACCTCAGACTCTCCT
AGACCTCCTAGTAGGAACCATGAACTGGCAGTTCCAGGCCACTTGTCTTTTTCCGTTGTT
CCTGATTGGCTTCTGTCAGGAGATCCTGAAGCCACAAATGGTGAAGGTGGGTAACCCACA
GGGGATCCAGGCTGATTTCAACATGTGAAGACTAACTTGGTTGCAAGAGATGTTAGGAAT
TCTCTCCTCTCCTTGAAGGATGAGATCCCCCCTCCAAACCTTTCTTTGCAGACTTTTGCC
ACATCTCTCCTGCCTTATGTGTTTTACATATATTTTCTCTGCACCCAGTAACTCTTTGAG
CAGAATATGGGTGAGCCAGGCAGTGCATGAAGTCTGCCTCCAGTGCATTCTCTTTTGCCA
CTTTCCCCTGGTGCTCTTTGACAGACCCTCACTTGTCCCTTTCATACTGGTCTGTAACTG
AGAGGCAGCCCTATGGATCTCAGGAAAAAAAAAAAAAGCATAAAATAGCAAATAGACTGG
GAGGGAAACTGAACTTGTTGCTCTTGGAGAGACTTTTGGACCAGAAACCCAGAGGGAAAA
CATGAAGAAGTTGCTATTGGAATGCTCCAGGAGATTCAGGGTCAGGAAAAAAGTAATTTT
TCTTCAGGGGATAATAAAGAATACTAATAAGAAGAAGGACAGGGTAGTTTTCTGTTAACT
GATATTAGGAAAGGTTATATGCTGAGGTGGTGAAAAGGCTTAGCTTGGAGTAAGAGAACT
TTTTCTTAGATCTTGGTGCTGCTCCAAGTTGCTTGATGTTATTCAGGAAAGTCCCCACAA
TGGTAGCCACCACTGTGAATGTTGTATATGTGTTCACAGATGTAGGGTGGAGATCAAAGT
TGATGACTTGAGATCCAGAATTTTAAAATCAGACAAACTCTTTCAAAAACTGGGTCCCAG
AAGTGGAGATGTGGCTCACTGGTAGAGCTCTTCTCTAGCATACAAACTCTCAGTACCAAC
AAAACAGAACAACAAAACCTCAGCCTCATTTGTGGCCTTAGGCTAATTACATATCTTTTG
TTGGCTTCTTTCTCTCCTTTGTAAAAGGTGAACAATGCCTATCCTATAGTGCAATGATCC
CCAGACTTAGCTCAAAAAGACTTACCTAGAGAGCTTGTTGCACAGGTGGTTGGGCTCCAA
CCCAAGAGTTTCTGATTGTTTGTCTTGGGGGGAAACAGGATTTGTATTTCTAAAATGTTC
TCAGTTGATACTTGTGCATGTCCTCACACCTGAGCTTTGGGTTTGATCTGTTTTGAACTC
CATATGAAGTCTAAGATGATGCTATAAAATGTTTAAAAATTGCAGCTATAGGAAGATCAC
AGCATATCTTCAAGTGAGGGCACAGTCTACTGTTAAGGGCATCCAGCTACTGGTGCAGGT
GAAATTCCTGAGGTAGAAAACTGTCTTGTAAATGAAAGACTGTGTTCTAGGGTTTCCTGA
CTCTTCAAAATGGTGCAGAACTGAAAACTGGACAGGAAAGATGGAGCCTTTCAAATTGGC
AATTTTCTTGGGATTCTACATGCCAGTTCATAGGATGATAAACAAATTTTGAAAGTTGTC
GAGTCCAGAGCAAAGGTAACAAGAAGGCAAGGAGGATAGAGGCACATAAAAGACAGTACA
CAGAATGATTTCCAAGTGACTTTTTCTTACTTTATTTTTTTTTATTTTTTTATTTTTTTT
TAAAGAGAGAGTGAGAGGCAGAGGGGGACAGAGAGAGAGAATTTTAACATTTATTTATTT
TTTTCTTAGTTCTTGGCGGACACAACATCTTTGTTGGTATGTGGTGCTGCTGAGGATCGA
ACCCGGGCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNGAGAGAGAGAATTTTTTAATATTTATTTTTCAGT
TTTCGATGGACACAACATCTTTATTTATTTTTAAAATTTTTTTATGTGGTGCTGAGGATC
GAACTCAGCGCCCCGCACATTACTGCTTGAGCCACATCCCCAGCCCCACAGTAAGTTTCT
TAGACTAAAGTTTCCAAATATTTGTGTTAACATATATACATAGTAACATACAGATTTAAA
GAAACATACAGGGGGGGGGCCTGCCTCCTTTTCTCTAAGGATGGTGGAGGAGAAGTTGTT
GCCTGATATTCTTGTGACTGAACCTACAAAAGATGATAACAAGCTTCTTGCCACACTCTG
CACAGCAGTCACCCATGGGCAGTTCCTTCCATGAATGGGGCAGGCCTTTATGGACTGAGA
TCACTTGAAGCTCATTTTAAAGTGCTCTAAAATTCTATGACTTTTTTTCCACATTGCCAG
TAATCTGATCTTTCTTATCAAATAACAACATCTTAGACTTTTATTTCAAGTCCTATCTGC
CCTTTTATCTTGGCATGCTTGTAGGCAGAAAACTTTAGCTATTTGTGCTTATAATTATAA
TTCCTAATCCTTGAGCAGTCCAGAATGTTTCTCCACAATATAAGGATAAGAAGGGGATAC
TGCAAATGAGTTTTGTAGGTACCAGTGACAGAATGATATCCATGTGACTTTTTCTTAGTA
AGAAAGGCTACTTGTACGTTAAAAGACAAAAATTCCCATTGTGGCATCTGCTCGAACTAA
AATTTTACACGAAAAGATTATCTTCACTTGTTAAAACTTCAAGATATTACACGAAACATT
TAAATTCTTTTAAAAAGTCCACAGAGCCAGGTGTGGTGTCACACACCTGTAATCCCAGTG
ACTGGGGAGGCTGAGACAGGAGGAATAGAAGTTCAAGACCAACCTCAGTAACTTAGCCAG
GCCCTGTGTCAAAAGAAAAAAGAAAAAAAAAGAGAGATGTGGCTCAGTGGTTAAGCACCC
CTTAGGTTCAATCCCTAGTACCCCCCCCCCACACACACCCTGCTCCAGGAAACAAAACAA
ACAATACTCTCCCCCCACCACCACAAATCCACAGATGTTGGGAGTTATTGTTTATAGGAT
TATATTATAGTTTTGTTACA
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