SelenoDB
Release 2.0
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Promoter Report for SPR00001246_2.0
Identity
PromoterMethionine sulfoxide reductase A (MsrA)
SpeciesIctidomys tridecemlineatus (Squirrel)
Promoter IDSPR00001246
Promoter release2.0
External IDNone
Transcript SPT00001181_2.0
Annotation
Prediction method(s)
Promoter prediction (5000bp upstream, N/A) [Report annotation error]
OrientationForward
Structure gene structure

FeatureCol PromoterCol Coding exonCol Non coding exon (UTR)Col IntronCol SECIS
ResidueCol SecCol Cys or Other

Toolbox
Sequence
>SPR00001246_2.0 # Promoter # Methionine sulfoxide reductase A (MsrA) # Squirrel (Ictidomys tridecemlineatus) Full length # Forward
GGAAAGGTTTTGCATGTGATTAGGCTCACTGACCAGGGATATATAAAAGTTAATATTATG
CTGGAGATTAGGAATTAATATACCTTTCAACTTGCCCTTTGCCTCTCATTTCTAAAAACA
GAGGAAAATGCTTGATCTTGCCCAGTAAAAGTGACTTCTTGGTGCCTCCAGTTTAAAATA
GCCTCTTCAGTAACTCCTTGGTCTCTTGGAATTCTCTCCGGGGCTTTCACTACCCCTTCT
TTTCCACAGTGGCATCTGGATCCTGGGAGAAGCTCCTGGTGTCAGGGTCTCTCAGCCTTG
TCCCCCATCCTTACCATATCTCACTGATGTAGCTTGGACTCCTGGTCCCCTGGGCTCCTG
CTCAGTCCCTGAGCCATCATGCTCATTCCTGGTATTAAAGACAGGGAATTTTTTTATGGC
ACAGGATCACAGTACTGGGTCTTCTTTGCCCTGAATCCAGGCTATAGTGGGCTCACTGGT
TTTCTCAGTCTTTCCATGTCCTCAAACTCCTTGGAATGTAACCTGCTTTCTCCACTCAGA
ACACAACTGTGCAGCATCCTGTGAGGCTGCCCTCAGCCACTGCACCCTCTCGCCTCACAT
GACACATTGCAATGACCCAGTGGCTTATAGTCTCTCTAGACTGTCGCTTTCAAGTTTGTT
TTTTTATTTTTCATGTTTACCAAAGGCTACATTAAGAAATATGTTTCTGGGTTGGGCTGT
AGGTCAACGGCAGAGTGCTTGCTTGCACATGTGAGGCACTGGGTTTGATCCTCAGCACCA
GATAAAGGCAAACAAATACAATAAAGGCATGTTGTCCATCTACAACTACAAAAAAAAAAT
AAAATAAAAAAATTAAAGAAATATGTTTCATGTCTCCGCACATTGCACACACTATACACC
CATATGTATATAACAGAGCAACAAAAATTCCCCCAAATTATATTTACCCTTACTGCTTGT
TGATGCACCCTGTTATCTTCTAATCTAATCTAGGTCATTTTAAAATATGTTGGTCCATTT
CATTGTGCACCTGGTTATTTTTTGCTATGAACCCAGTGTTTGTGTCCCCCGCCCCATTCC
TATCTTGAAGTACTACCTTGATGTGATATTATTTGGATGTGGGGTCTTTTTGACAGATGA
CACCAAATATTAACAATCTCACAGTTTTTATGGGTCAAGAATTTGGGAGCCACTTAGCTG
GGTGGTTCTGGCTCAGGGTCTCTTATGAGATGGCAGATAAGATACCATCCAAGTTTGCCT
GGGGCTGGACCGTCTGCTTCCAAAGTTGCTTAGTCACCTGGCTATCAGCTGGAGACTTTG
ACTCCTTGAAGTTTGGACCTTTCCACCAGACTGACTGTAATGCTCATGGTGAGACAACTG
GCTTCCCTTGGGAGATGACCCAAAGCAAGCAAGGAGCTGCTTGCCCTTTATGACTTAGCC
TCAGAGGCCCCACACATCATCACTTTTGTCTTGTTCTATTCAGTAGAAGCAAAAACAAGA
GTTCTGCCAAAAGGGATGGGGAGTTGGCTCCACCTTTCGAAGGAAGTTCCAGGGGATTTG
TAGATATATTTCAAACCTCCACAATAACTTGTATATCTTTTTAGATGACAAATAACACAA
GGCAATGTATGGTATGTGCTAAATGGTAGGAACAATTGGCACTATGGGCCAACCCATGAT
GGAATGATTTTGTGCCAACAGGGAAGGTTGTACAAAGATATATTAGCTTTTCATCACTTT
AATGAAATACCTGACTACTTATGAAGAAGGCTATTATGAATAAGAAGTTTATTTGGTTTA
CCCTTTGAGAGGTTCAAAGTCCACAGAGCATAGCCAGGCTGTGGTGGGGCTGCTCCTTCG
CCATCACCTCATGGCACAGGTAGCAACGTGGGAGCACATGGAAGTAAGCAAGCAATTACA
TCTACAGTCAGGAACAGAGAGACTGGGGTCCCACAATCTCTTCTGAGAGCAGTTTCAGTT
GACCCATGTCCCTTTCATTAGACTCTGCGGCTTAAAGTTTCCTCTTTTCTTCACAATGGT
GCCACCCTGGGGACAAGCCTTTAACATGCTCCTTGGTGGGAATACAATTGGACCACTTCA
AAGTCATAGCAGATGAATACTGAATTGAGTGGTAAAGAATGGTTAAGTCTAGAAAACCAG
AGACAACCAGGCAGTCCAGGTTATACAAACAGTGCAGGTAAAGTCAGGGAGGCAATCTAT
GAAATTTCCCCTGTATAACACTTGACCAGATTGTGGACTACTCTTTTGTACTCTTTCTGA
AGTGGTTTTCATAGTCCTACTTCACCATAATAAATTGTTTGGGGGAGGGTAAGAGGAATA
GAAAACTTACCTTCTACCTTATAAGTCACTGGATCAGACTTGTAGAGGACTGCACAACAT
CTTCAGATTGTGGACTTTGAACTGGATATGAACTTCTTGGAAACTTTTCTGCTTTGGAAT
AGGGAATTTTATGTCAGAAGAGTGTACAACAATATTTAGGTGGCCAAAGAAGTGGTCTGT
GACAGAGTTGTTCCATAAAGTATAATCACATCTTCTTCATTCCTAGAATTTCTAAGTATT
AGGTGAATCCATGGTTGCTCACCTTCTTAACAGATTTGGATATGTCTCTAATCAGGTCAA
GGAATTAAATAGAAATAAGATGTGCCATTCCTGGGACACTTAAAAGTACTGGGATGTGCA
CCTTTTTTCTTTTTGCTTGGCTGAGATACAGATGTGATAGCAGATGCTGGAGTGACCCAA
GCACCCAGGTTCCCAGGGATGAGGAAGGTGGCAGAGTTGACTTACTAGTTCTGGACTGCC
TACAGGTCATTAGATGAGAGAAAGAAGAAAACAAAAGCAACAAATTATATTGTTTCAGAT
CTAATATCTTGGGGTCTCAGTTTAAGCAACCAAATCTATATCCCATCTAGAACCTAAGCC
TAGTGTTGAAATAGAGCATTATCTCTGGCAGAGCTATTCTTAAAGAAATGGAAGAGAAAC
TTTTGTTGACCTGTCAGGGTTACACATAAATTCAATAGATAATCATTGAATTCTTCATGT
GAGTCCATTCTGTACAAGATATTATGAAAGAAAAGACATGGTCCAGCTCAGGGGACTTTC
TTTTTCTAGATTGTTACATCTAAGAGAAACTACTATTTCGTTTAAACTTCTATATTTTGG
GTCTCCTTGTTATAGGATGCTTAGACTGCACCCTAAAGGATGTAAATTGTTAGAATATAA
CATAATTGAAAAAAACAACAAATCAAAGCAGTACCAGCTGGTGAAAAGGATGGGGTGGGG
TACCCCAGGGTGGAGAAGTCAGGAGGAAGTTGGTAGAAAGTGAAGAAAAGGGAGGCTTGG
GGTGAAAACTGCATTGCTGAAAGCAGAATATTTAATTCTTTTCTCAAATCAAAACCTCAA
CTGCTGTTTAGGAAAAGAAGCTTTGAAATAAATAAATGTATATTTTTCTTTAAAAATATT
TATTTTTGTAACTATAAAGATTACATAGCCATTGGAACACTTGAGAATGTTTTAACAATG
TACATAGAGCATTTTCAAAAGTTTAAGGGAAACTTTTTTAGTAGAATCCTACTACTATGA
ACCACAAAACAGCAATGTTGCTTTTTTTTATTATAATATCTAATTAGAAAAATCTAGTTT
TTCTTCAGTGGGGAATTGGGACTATATGCATTTCTGTACACACTACACATGAAATATACA
TATATTGTAATTCTATTGTGCTTGTTCACGTAACAGTAAAATGTTGTTCCCTTTAATGTT
AAAAATTCTTCAGTTCTTCGTTGCAGAGTATGTCTAGTATGTTATAGTCAACCATGAAAC
AAAAATCAAACCAACATGTATCAAAAGGCAGTAATATAGAATTATTTCCTTTGACAGATC
TTTTTATTTTCAAATGCCTAAACAGTGACCAGGACTTCCTAAGCTTAAAAGGGACATCTT
GGTGTTTCCAGGAAAGGATTTTAGAACCTGACTGGTTTACTCTCAAGACAAAAACAAATC
AAAAGTAAGAACAGGCACTGTTTGGCCCAGGGGAAATATACATTACAAAATAAATGTTTT
AATCTGAGGCTGTGTGTCTGGCAACATTCTGTGCACAGGTTAATCCTTCTGTCCTCCTTA
CATTACAGCCTCCCATAAAGACAAAGCGGTAACCAAACACTGGGGGAGGATGGGTCAAAG
CTTCTCATTTCTGTGGGTGCTAATCTTAAGTTCCTTCCTTCATATGAGACCACACACCCA
TCTTGGCACAGTATGTAAAACCGGTACTTCACATACGGAACTCCCAAGTCACTTCTCACA
TTTAGGTTGAAATTTTGCCACAGAAACAAATGTCACCTCCTGTGACTTCAGAAACAAGAA
TGATCCAAGGGCACCATTCACCTTCACCTAAACTTGTTAACGGTGGTGTCTAAGCCTGGT
TCCTCTAGGGAACGGCCTGCAAAGTGGGTTTAGGAGTGTATTTATACATAAAGGGTCACT
ATTTTGCTGAATACATCATCCCTATACTGTGCTTTTTGAGAGCAGTGATGGGTTTTCTCT
TTGGGTCAGCAGAAATCTATTTGGCTCCAGAGGAAACCTCCATTTCCCAGCCGTCGGCGG
GCTGGGCCTCACACCTTATCGAGCACAGTGAACAACCGCCAGGGAGGTGGCCAAGCGCGA
AGCAACCTCGACACCAGCCAGGCCACCGGGCTACACACCACCATCTTTTGGTCCCTGCCG
CTTCACGTACTTGTGCGACAAGTAGGACACGCGTTGTTCTCCTGAGAACTTTGCCCCTGA
GCTAGAGCCGCGACTCGCGGGCGGCCGCGCTGGGCCGGGCACCCCCGGGGGAAGAACACG
CCCTCGCTGACGGCCGCGGGCCCGGCTTGGGCAACCTCCACTCTGCCGGCCGCCACCCCG
CAGCAGCGCCCGCCCGCCGCGCGGCTCCCAGCTCTCGGCCGTGCCGTCCCATCCGGACGC
CCCCCGGCTGGCGCCCGTCC
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