SelenoDB
Release 2.0
Chart Advanced
Promoter Report for SPR00001251_2.0
Identity
PromoterSelenophosphate synthetase (SPS)
SpeciesIctidomys tridecemlineatus (Squirrel)
Promoter IDSPR00001251
Promoter release2.0
External IDNone
Transcript SPT00001186_2.0
Annotation
Prediction method(s)
Promoter prediction (5000bp upstream, N/A) [Report annotation error]
OrientationReverse
Structure gene structure

FeatureCol PromoterCol Coding exonCol Non coding exon (UTR)Col IntronCol SECIS
ResidueCol SecCol Cys or Other

ToolboxForward   Reverse    
Sequence
>SPR00001251_2.0 # Promoter # Selenophosphate synthetase (SPS) # Squirrel (Ictidomys tridecemlineatus) Full length # Reverse
TGGTTCTGAGGCCCACACTCCTCACAGGTTAGCCCTTCCCCTCCCTCTCTCTTGTTTGGC
TGAGTTTTTTACTTCTGATCCACCTAGGTATCACCAAAACATAAAAACATCATTAAAAGA
ATACAGACATGTACTTGCCAACAATCAAGTGTACACATTAGGGAAATTCAGTATGTGACA
AGGGCTGAAACCACTAAGACCATAAGGAAATAGCCACAATACCTTGTTCATAATGGCAAT
GCATAAGTTGGAATACATCTTTTTTAAACAGAGCCTATATGTGGGTTGGGGATATAGCTC
AGTGGTAGAGTCAATGCTTGGCAAGGGCAAGGCCCTGGGTTCAATTTCCAGAACAAACAA
GAAAAGGGCCTGTGCCATCTCAGATATCTATGCAAGATCTGAAGTGTGGTTATAATATTG
GCTCTGAAAATAGTAAGAAAGATCTTCCCTGAAGAAGGCAGTCTGGCCAGCAAGCTCATA
TGGCACTGTGCCACCTTGAACAATAACCCCAAAAGGTTCTTCTAGGGTGCAATATTATGA
GAACCAAACTGCCAGCCACTTCATTTGTAGATCTGAAAGCCACCATGGTGACTTTTCTAA
AGTGACTTTTCTAGAAAACCTTTTGATCTTTTGGTATCTGATAGAAAAACAAAACACCTA
TTGGAAACTGGAAAAGGACATTTATACAAATGCATTTGATGAAATTCTTCAAGATACTAA
ATTCTAATTTTAGAAAACCATGTTTCCTTCCCAGCCATAAGAATACAACACAATACAAAA
CTAATGAACTAACAGGAGGCTTCCCTAATAGACTTAACTTTAAAAACTTGAATGGCTGTT
TAACACTGTAAAGTCTGTCTTCTTTAAGAGCACTTGGAAAGTTCTCTGATGTTTTAATGC
AGTGCTATTTCCTAGAAAGCAAACATCCCGCCCAACAAACTAGTACACACATCATTGACA
AAATATGCTACTGCTCATTACCATTTCATTACAGAACTAAAACAATAAATTAAAACCTCC
CAAATCACTAGCATTTACAATATCTAGGACCATCATAAGTTTCTGGAACATGTCCTTCTA
AGTTAGAAGCCTTCTGGCTAAAGCAAAAAACATGTGCTCCCAATAAAGTATCAATCTAAA
GGTTTGTAAACCTCCAGATTGATACTTTATTGGGCATAGAATTATAGACACCCCAAGTTT
TAGGGTCATTTTCCCCAATAAAATCTATGATTAAGAACATAATTCCCATTTATAGAGTTT
TGCATCCTCTGGGAAGCACATTGTTCACATAAAATAAATTTACAAAGCCCGAGTTTGAGT
AGTAACCCTAAGCATCCTTACAAACATGTTCGGAATGAGCAATGACTTTAGCTGGAAAGC
TACAACTGTACCAGGACAAACCTTCCAACACCATTCCAAGAAACCAAACTGCCCCCAAAG
AGAAAGCGAGCCAAGCAAGTTACAGTGACGGGAATTTTGAAGCCATTTTAGAGTTTGGAA
AGTCTTAATAACACTTCGACTAAGAAAAGTTTGAACAAAAACAGCAAAGTTCTTGCCTCC
GCAAAATGCCTCACATTTAACACCACCCCATCCCCACCAGGGGGAAAAAGAAAGAAAGAA
AGAAAATCCAACTCCTCAAAGCAACCAATTATTTTCCTACCTCCCATCCCTATATCCTGC
CCCACCACCAAAAGGTGGGGAGAATTTGGGGATTGAACTTCCTTTTTAATTTCTATTTTC
CCACACTTTTAGAAGGGGAAAAAAAGTTAGAAACACCTTACATCAAGAAGGAGCTCAGTA
GTTTTAAAATTCCAAGTGGAATGAGAAATACAAGCCACCACATTCACATTCCAAGCTTAA
AATAAAAAAAAGTTGAACTTATATTTTTGCAGGGGAGGAGAAAAGAGGAGGGTCGCTGGG
ACCGCTAGTTAAGTAAAGATTAGAAAGAGGGGCTAAATTTGCATAATAAGAGAGTCGAAC
GCGACTGAGGAGCCACGTGTTTACACCTTTAAAACAATGACATGAATATTTAAAGATAAC
GTTTAACCCTTTGCTTCCTGGGCACGTTTTCATTTTTGACTCGAGCGCGAGACGCAGGGC
CGGGGAGCGCGGTCAGCGCGGTAGGCAGGGCGAGCGGCCCGCCTAGTACCTACCTACCCC
CAGGCCCCGCACGTGCAGAGGGGTGGACACCGCGGCGTGCGCGCAGGGCCAGGGCGCTCT
CCATGAGGCCCGTGGCGCAGGCGGCCCGGGCGCGAAGGACGGCACTCGGGAACACCTTAA
GTCTCAGGCTGCCGCCTTTAAAGGCACAGCAGGCCCGGGCCCCACTCTTTGNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAAACCCGAGGAGCGGTGG
CATCCGTTGCATGATGCAAAAAGGATTGATTTCAAAAGTTGCGAGTTGCATTGGCAGCAG
TCTGGGGCGTCGTGTCCACCTCCTTTTCCCCGACCCGATGCAAAGGCCAGGAGTGATTTC
TTCAACCTGGCAGTGCTCGACCGCGCTGCACCAGCGGGACGCAATACCTGCTCCTCAAAC
GCAGCGGTTGGAGTATGCTGGAAGACAATGACCATGGAAACAATTTGCAGAGTGTAGGAG
CCGAGGAAAAGCCACCTCTGCTCCAGTGAAAGATTTGAAAACATAAACGGCGCGTTTGAG
TCTCATTGACTCCCATCATCTTCTCCACCTATTGTTTACCCCGGCTCCGGAGTTCACTGG
AGCCTCAGTGAAATATGCAAATTCCCTGCAAAGTTTCTTGAACATTTTAATATGCTTGGT
AGGAAGTTTGGGGGGAAAGCTTAAGGTTCCCCAGTTACATCATTTTGTTATTCACATGTC
CCAGGAAACATGGCAGCCTACTCCTGTGTTTGCTTAAAGTGACATCAGTGAGGCAGCTTC
ACCTCATGAAATTGAAATGACTTTTCAGGTTTTCGACTTTCTAATGCATTGTGGATGTAA
ACAAAGTAAAAATGTGTCGGTGTAATGTCTTTTAGGGCTTCCCTTAAAACTGAGCAGGGT
AAAGCAATGCCATACCAAACTTTTGGAGTGGGTCAGCATTTTCTGAATTATTTTGGAGCA
ATGGAACAGGGCTTTATGGGCGCTTTCAGGTTTTCACATTACAGAGTTGTCCATTTTCTT
CTTGAAATGTTTGCAAGCTACCTAAGGTTTTAATCTAGGTGTGGATGCAGAAGTGATGCC
ACTTCCAAGACTGGGTGGATACAAGCTCCTCCTGTTTTTGTCTTTTTCTCCTTGACCTGT
AAGATTTCAGAAGTGCATGGTAGCATTTTTCGGTTCTTTAACGTGCAATTAGACTTTTGT
AAGATCATTAGGACTCCTGCGGTTGACAAAACCGGATTTGTGTGGGAACTTCCTGGAAAG
AGGACACCTGCACACAATCACCAGGTACCACTCTTCGGAGTCCAGAATCAGGGGAAAAGG
ATAAAAATAGTTTTATCCCTCCACACCTTTTTAAAATTGATTGTGTTTTTGGCAATGTGA
TTTTTTTTAAGTGAAAATTTCATGATTAGAGAAAATTTGGTGGGGTAGGGGTTAGGTGAA
GGTGACCTAGGACCCTATGCTAAGATTTGTGTGTCATGCCAAGGAGTAGTTTTAGCTCTG
AAAAAGTGTTAGAGGATGCCCTCTCCCAGAGGGGAAACCAGAGCAATGTTCCTGGTTGAG
AGGTCTTTGTACTAGTTAAGCCTGCAGATGTACTTGAATTGAAAGTAGGGGGAGTGTAGA
TAGAGAAAGGAGCTGATGTGACTTAATGTGTGCGAAGAAAAGGAAGAAGACCCCAAGTTT
CTAGCTTGGGACAGAATGGGTAGCAATGTTTCTGATACTGGAACTCTTAGAGGGCAAGCA
AGATTTGGGGTGAGTTCAGCTTTGGAAATGTTAGATTCCAAGCTCACAGGGTATTCGAGG
TAATTGGAAAACAGACTCATGAGTTTGAGAAGCAAATCTGATTTCCATGTAAATGGTGTC
TGAAGCCTCTGTGAGAGGTG
Chart Advanced