SelenoDB
Release 2.0
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Promoter Report for SPR00001252_2.0
Identity
PromoterSelenocysteine synthase (SecS)
SpeciesIctidomys tridecemlineatus (Squirrel)
Promoter IDSPR00001252
Promoter release2.0
External IDNone
Transcript SPT00001187_2.0
Annotation
Prediction method(s)
Promoter prediction (5000bp upstream, N/A) [Report annotation error]
OrientationForward
Structure gene structure

FeatureCol PromoterCol Coding exonCol Non coding exon (UTR)Col IntronCol SECIS
ResidueCol SecCol Cys or Other

Toolbox
Sequence
>SPR00001252_2.0 # Promoter # Selenocysteine synthase (SecS) # Squirrel (Ictidomys tridecemlineatus) Full length # Forward
TCAAATGGTTCACAAGGTTTTGTTAATCTAAATGTAAATATGCCATTGATTCTTTCAACC
TCTCCAGAAGATTTTGGGTCGTCAGGATGGTGTACTTTTGGAAGAAGATTATAGATTCTT
TATAAATAATTTCACAATTGAGAAAAGGGTAATGACTTAACAGTGTTCACATAAAATGTG
TGCCTCGGTCACTTGATATAAAAGTTGTTTTGCCTCAGGTTGGAAACATAAAATCAAGTA
GCTTTTAGAAACTGTAAGGGATGTAGCTTTTTGGCAAGGAAGTGCCATAGGCCACCCTGA
AAATAGATACACAGTAAATAAAATACATTTTAAAAATTGGTTTGATAGTGGTTAAAACAA
ACAAACTCTTGAGTCTTGTTCCAGGCCTTACCTCCCTTTTACAGATTTTCCAGGGATATG
CTGTTGACAGGTAACACATAACTTCAAAATAACCTTACTGTCTTTTTTAAAGTTTCACAA
CTAATGCTGATTTGCGATAGTAACCAATTGGTTTACACTACAATGAGTATTTCCACGAAG
AAATGTAATTTCATGCAGAACAATCAGATTTCCCTATTCTTTCTTTTCAAAATCAGGGAC
TAGAGACTGTCAAGGTAGAAAGACCCAGTGCAAGAAAGGTGCTCAACTTATGGGAAGGTC
AAGAAGCAGAGAGAGACAGGAGAGGGGCAGGGCCAGCAGGTAAGGTGAACCCTTCCTGAG
CATAGGCCAGTCACCACCTCCTTCAGTCTTGCCCCACCTGCCTACAGTTACCACCTGGTC
AGTCCATTCAAACCAGGACACAACTTGCTTATGAATGGAGTGTCCTCTGGAACTCTATGA
AATAATCCCTTTGTTGTGTACTTGTGGTCAGTAGTTCTTGCTGATTTCTGTGGAGTAAAT
GCTCTCACCGTGTCTAATTTTAAGGCACCAACTTTTGAATGGGAGTTGAAAAAGATATGC
AAAAGTGCACCATTATTATTGTGTTTCCATCACACAGATACAATGGATGAAAGTAATCTG
AGAAGCATAGATAATAAATATAGTAACATAACTAGAAAGTGGTGAATTTTGAGTATTTTG
CTTCTAATGTCATTCTGTGTAAGCTCATATAATTTAATTTTAGGAGTATCTATTTAAAGA
CTAGCTCACAAAAATACTGAACATTTAACAAGCAGCTTTCACAATCAAGTGTGAAACAGT
GTAAATGGGCTCTAGTACACTACTGAGTGAGGACAATGCCAGGGATTACTATAGGCTTAC
CTAAGATGAAGATGAGGAGGAAACGGAAGGCAGGGATCCTTTTTATTTATGTCTTCAGCA
CTTGTAGGTTATTCAAGAGCCAAAGTAGTTCATTGATTTTTTTCCCCCTTCTATATTCTG
GGCATTGTTTTAGGTACTAGGGGGAGAAGGAGCACTGCAGCAAAAGTCAAGGCTCTTACA
TTTATTGGGGGGCTATGTAGACACATGTCTGTGTGTCCAGTGATGGGGAACAAACGTTAT
GGCTAAAAGTTCTGTAGTGCCAAAGAACAGGAGTGAAGCATTGCCATTCATATGGGATTG
TCAGGAAGTTGTGAATGTCTTGGAACCTGACAGTGTGCATAAGGTTGATTCTGCGCAGAT
CTTAATCAATCAACAAGGTTGGAACACAAAGGAACGCATTTTTTTTTTCTTATGATGCCC
ATGCAATTGCACTTCTGTATGCTCAGCAGTTTACCCAAGTGCGAAGTCCTTTCTAAAGTT
CTAGTCTTGGTCTCAGAAACACTAGGGTTTAACTAGACCAATCAGATGCTCGCAGTCCGA
ATTTTAACCCTGACTCCTCCCAACTCCGCCAGAAGCCGGCTAAATGTGAGGACGCCCTTG
CGCATGCTCAAAGACTCCAAATTCCTGGTGTCCCGGCTACAGGTTTGCGCATGCGCAAGA
GGGGGCGTTGCTGGTGGTTATCTGTTTTTGTCCCAAGGTCCTGCCGTACCGTCCAGGCGG
CGAGTTGCATTCTGGTTCCGTCGGTGGCCGGTGTGTGGGGAACTGTACTTCAGTCTACCC
GTCTCCGACGCCAAGGGCGTCATGAACCGCGAGAGCTTCGCCGCGGGCGAGCGGCTGGTG
TCTCCGGCTTACGTGCGGCAGGGCTGTGAGGCCCGCCACTCGCACGAGCACCTCATACGG
CTGCTTCTGGAGAAGGTACCGAGGTGTCGGTCCCCTCCCCAGCCGCGCGCCCGCGAGGCT
CCGGCCCCGCCCCGCGCCCCGGTCCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNAGAATGATTTATAGTTAGAACTTTAAAACATTGTCC
ATCTGTATCTAAGCTGAGTCCCATTTTATGAATATTTGTTTTTGTTGCAAAGAAATAGGA
AAAGGTGTATTGGATTATTAATTCACTTTTATTCATTATTTCAGAAAGCTTTTCTTCAGT
TCTGATAATCATGAAATTATGAAGTGATAGTGATTTTAAATATGATCATTTCTTTCTGTT
TTTCAACCTTTCTGGAAGATAAATATAAAAACTCTCTTAAAAACTCCTGTCTTCCATGAT
TTTAAATCATGATGAAATTTTCCTGGGCATAATAGGATCTTTTTAAGCTAAATTGTTGAA
GTCAGAACTAATGATCATGAATGCATAAATTGAATGAAGATTTCATATTTAACAATTTGT
TTATAACATAGTTGGTAAGTAATAAATGCTTTGTTTATGAGATTTTGATGGTAAGGAAGT
ACAACACTGTTCTGTGATAATCCCATTACACAGAATTTCTGATCTGCTTAACTATAAATT
ACAAATTATTTCAGATTACAAATAGATTTCTTATTTTAAAAAGTATTTAAAGACATTTTT
AAAAAATGTATAACGTCATATAGTTTAAAGTCAGTGGATTGTCATTGTTATATTTTTAAG
AAGCATATATGTCTTTTAAAATTAGAACAATTTTTGAAACAAGTTCATTGCCATTAGAAC
TTCTCTGGTTATATAGTGTAGTTTCTGTTGTTGCCTAACAAACCATGCCAAAACTTAACG
GCTTGAAACAGTTATACATTATTATTTCTCATAGTTCTCTGTGTTAACTGGACTTAGCAG
AGTAAAGATTGTTTGTTTTGCCTCTTTGGTATAGTTGTGGTCAGATGTTGGCAGCCAGTT
TAGTCTTCTGAAGGTTCACATGGGCATTTTTATTCAAGATGACTTAACTCACATTATATG
GGAACTCCGATGGCCTCTCTTTGACTTGGGCTCCTCCCAGCATGGCAGCTTGATTTGGAG
AGAGGGCACCCTAAGAGTGAGCTGTTTCAGGATCCTGGTGGTGGGCTGGGGTTGTAGCTC
AGTGGCAAAGCACTCACCTAGCATGTTTGAGGCCCTGGGTTCGGTCCTCAGCACCGCATA
AAAATAAATAAAATAAAGTTATGTGTCCAACTACAACTAAAAAAAAAAAAAAAATCCTGG
TGAAACTGTAGGTAGGGCCTCTTATGAACTAGCTTAGAGGTTCCAGACAGTCATTTCTGC
TAAACTCTTACTGGGCAGGCAAATCACTAAAGCTAATCTGGATTCAGATGGAGGGGAAAT
TAGACTTCATCACCTGGTGTGGGCAGGGAAAAAAGAAATTGATGGTAGCCATCTTTGGAG
CCTAGATACCATCACAAAATTGATGAATTATTTCAATTTAAATAGGATATTTTCACTCTA
TTAAATATAGTTGATGACATATATATTCAATAGCTGAATATTGCCTCTGTTCTTTTTTGG
TTATTGTGATTGAATACTTGTGTATTGAATCACTTAAAATACTGAGTGTATTTGTCCAGT
CTTTGCCCTGTTTTTTGCTC
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