SelenoDB
Release 2.0
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Promoter Report for SPR00001261_2.0
Identity
PromoterSelenoprotein O (SelO)
SpeciesIctidomys tridecemlineatus (Squirrel)
Promoter IDSPR00001261
Promoter release2.0
External IDNone
Transcript SPT00001196_2.0
Annotation
Prediction method(s)
Promoter prediction (5000bp upstream, N/A) [Report annotation error]
OrientationReverse
Structure gene structure

FeatureCol PromoterCol Coding exonCol Non coding exon (UTR)Col IntronCol SECIS
ResidueCol SecCol Cys or Other

ToolboxForward   Reverse    
Sequence
>SPR00001261_2.0 # Promoter # Selenoprotein O (SelO) # Squirrel (Ictidomys tridecemlineatus) Full length # Reverse
TGAAATCAAACACAGAGGCCAGTGCCTGTCAGACAGGTGTCCACTTGAGCAAAGACACAC
CCAAATGACACTCTCAGCCAAATGGTTCTTGTGCAGCTCCAACAGCACTGTGAACAAAGG
CCACCTCAGACGATTCCAGACATTGTGTGCCCAGGTCTAAGAGCCACACAATCCAGCCCC
GTGGAGGACAGAGAAGACCCCACTAGCCCCAAGCACACACTCGAGCCTGCAGGCTTTACT
CACAGAAATGTATTAATTTATTCACAGAAATGTTCTTATTACAATGCACAGATACACACC
AGCACTATTTGCAGTACAGAGAAAACTGAATCAGCCCCTGAGAAGGTGAGCTTGGAGGCT
CCGCTCATCAAGGTGGGGTGGACACCCCAACAGCTCCGCCCCCAGCACAACCAGCAGCAG
GAGGCCAGGCCCCAAGCACAGTGGGCAGAATAGCACACGGGCACACAGTGGCTGCATCTG
CTCCTGGTGACAGGCCCAGGGAGGTGCTGCCCATCAGCCAGCCAGCCAGCCCGAGAACAG
GCCACAGCAGCAGAACTGCACTCTGCTCTGGTCAGCTTTGCACGGCTTGAACTTCTGCAC
TGAGCCTGTTTCTCTTTTAGAAGTAGAACATAAAAAAGGAAAGCAGGGGCAGCAGCGCAC
ACAACACTTGGACGGGCCATGTCTAGGTCATGCTGATCTCCAAGGGCCCTGTCCAGAACC
CATACAAACCCACGGTATGCCCAGGGAAGGGCTGTGGTGGTGGTAGCTGGAAACACAGCA
AAGGCAGATGTCAAGGAACAAGCCCACCTGGGAAGGTGAGCAGTGTCGCTTCCCTCAGCT
GGATACCGGGGGACAGGGTACCACAGGGTGGACTGCTGTCCACAGGCATGAGACTGGATG
CTGGGCTCAGCCCTAGACTGGTTGGTTCTACGGGCCAAGGGCCTTAAGGTGCTGGGTGTG
GGAAGCCAACCTTACGGGTGACTGAGTTACACTCCCCAGCTGGGTGCTGAGGCGCTCAGT
CACAGAAATGGGTGTGTCTTGCTACAGCCCCATGGGTGAAGCTATGCTTACCTGTTCCTT
TGTAATCTAACCCCTTGCCCTGTTTAGGATAGAATCTTCCATGAAAGTGCCTTGTGTGTG
TCCCCTTCTCTTACTATGCCCTTGGGTGTGGCCTACCCAGGTGTCAGTGGACATCATGAA
GACAGACTCAGCCCCCTGAAACCTGACCCCTTGCCTCATTTGAATAGCTTCTCCTCAATA
AAAGGGGTCAGCGCGTGCTCTATTTCTGTGGCCCCTTAAGGTCAGAGGAGCCGTCACAGC
AACCCCAAAGAAAAAGGTATTTGTGTCTCTTGTGTGGTTATTTCGTGCAGCCCAGTTTAA
CTAGAGTGACCCCTGAGCCTTTTAATCACGAGAACAGAACCCGGCAGCTGGGCAGACCTG
GAGGAGGGCTCACTCCAGGCTCAACTAACACTTCTGGAGACCTAGAGGGGCCAGGCAGTG
AACCAGGCTGGGGGGTGACGGTGCCCACCTTGGGTGCCTCAGTCTCATCTGCCCCTTACT
TGCCATCTCCTGGGCTCAGAGGAACTAGGCCAGGGCCTATGTCTCCCAGGGCACGCCACC
CCTCCTAGCTATGGGAGTTGCTCCTTAGCCCAGCAAGACGCCTCAAGGTGGCCCAGGAGC
CAGCACAGTCCAGCTCACCTGGAATCTGATAAAGCCAGCCGCGGGTCCTGTGAGCCCTGT
GTTGGATATTCACACTGTGGTTCTGGCTTTTGGTTTGTGAACCTTGTCCTGGGCAAGTAG
GCACGCTGCCTTGCTTTGGGACCGAAGCCCAGGTATGGAGTTCCCTGAGCTGCCAGTAGA
GGCCTGTCCTGGAACCCCAACAGCCACAGTAGGCAGGGGTGAGAACAACCTACCTGCCCC
TCAAAGTCACACCTCGAGGCTCACAACCACCAGGGGCCCCAGCCTCATCCAGAACTGCTG
AGGCCACAGAAGGGTAGGCCGAGCCTGAGCAAGGGCCCAAAGACCCCCTTCCTCTTCAAG
GAAATGTTTTAGAAGCTATGGTAGCGCACACCCAGGTCCCTGTTACTTGGAGGCCAAGGC
AGGACAACGGCAAATTTGAGGCCAGCCTGGGCAGCTTAGCCAAAGTATTTTACCACACCT
CAGGTCTTGAAACACTGAATAAACCCCCCCAAGTCTCTAAACATAAAAAGCATTTTCTGG
GCTGGGTGTCTAGGAGGCAGGCCTGCCATGGGACAAGCTCTACTGGGATAGGCTGGTTCG
CACCACCTGTGTGCCTCCTCAGGGTGACCAGAAAGGGCCGGCCCAGGAGAATGCACACAG
GGAAGGTGGGTCTGAGGAGCTTCTGTCCCCCAGAGGGTAGGGTGAGCCCACAGGGGCCTC
GGTGAAGGAACACCAGCTGAGACGCTGCGGGGAGGGAGGCGGCCCAGGTGGCACTGGAGG
GAGGAGCACGCGCCTGGGAAGCCCGGGTAAACATGACATCATGACAGTAATTCGTGGAAC
TAGCTCTAAAGTCCTCTGCGTGTCATGAGGATAGCGTGGATGGCCATCAGTGCTGTGTTC
TTAACGGAAAGATGCTTCATCCGACAGAAGGGGCAGTGGGACCGCCCCGCACCGCCAGTC
AGCAGGAGCCCAGGCAGAGCCGGGGGCGGCTTTGTCCCCGGTCCCTTCGCCAGGACACGC
TACCCACCACGACACCCTTCCAAGATAAAGGCTGGCCCAACTCAGGAGGAAAGCGCTACT
GGGCACGAACACGTCCCACCCGCCTCACTGCAGGGCGCGGGCGCGGCCGAGGGTCACCCG
CCTCCCCGAGCCCCCGCGCACCTGGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNC
TGTCCCGGTCGGAAGTCCCGCCCCACGTGACGCCCTTTCGCTGGGGGGCGGTATCCGCAG
CCGCGCCTGCGCAGGCCGCGCCCCTAGGATTGGCTCTGATGGGGGGGCTCGTCCATCTTT
CTGCACCGCGGGGTGCCCGTCGCCCATCGCCCTCGAGGGCCGGGGTCGAGCTCTAGTCTG
CAGTGGCCACGGCTGGCTCCCTGAGTACATGACTTGTAGGTCCCTGAAGTTGCGACCCGG
TGACATATGACAGACCAGACTGCTCCGAGTGCGCTGACATGCTGAGTGACGTCCCCAAGA
CCACAGGGGCACTTCCAAGTCGGGGCGAAGCCAAAATCAGCCCCAGCCCCACGCTGGGCT
GCGGGGCTCACCTGGCACGAGCGGAGGGGACAGAGACCCTCGTTTTTCAGAGCTCCAGTG
GCAGGAATGGCTGGACATTGAGGCCGCATCTGGAAGTGTTCCGTGGGCCCCAGGTGGGAA
CAGGCCACCTGTACCTTCGCACGGGAACAATTCTGGGCCAGCGAGAGCAAGGCCAAAGTG
AAGCGTCAAAGGCCAGGGCCAGGGGCCAGGCCGGTACTGGGCCCACTGGGAGCCTGGGTC
CGCATACGTACATGTGTGCTGGCCCCTCTTCCCTGCAGTGCTTCCTCATAAGCACCTTGC
CTCACCCTTTCTCTCCCTGTCTGTATGTGTGTCTCAGTCCCATGCCCTCTGAGAGGGAAG
GCATCCTGATGATGGGGTGCCAGGTCCCCCAGAATGCGGCTGGGGCCCCAGAGGAGCCAC
CTGTGACACCCACAGGTCCAGATCCTCCTGTCAGGCATAGCTCTCCAGGTGAGGAGTTTG
AGCAGGTGCTAAAGGATGACAGAAGGCTCAGACAAGCTTGTGGTGTCCCCCTTTCTAAGC
TCCTACCTGACCTGGTCCCAAAGAAAAATCTGAGACCTTGAGCAGGGTTCAGGGACACTA
GACAAAGGTAGGTGGTCCCTCCTGGCTGCAACCAGTCTTTGTTCCATTTCTGTCCCCCAC
CCCATTCTACACTTCAAGGAACTGGAACTTTCTCTTGGAGCCACAGCATGGGCTTCTGAG
ACCCCATGTGACCCCAGCTTGCCCCTATGGGATTGGGTGACCATGAGTGACCCGCTTACT
TTCTGCATGGGGTGGAGAGTTATGTGGATGAGGAGACAAAGTAGTTTGTGCTGAATGGGC
ATCCTCTCCAGCATTGGACAGTAGCCCTGATCTTTGAGTACCCCAGCTGCGCCTATCTGG
GGTCTTCCCACCAGGCCTGCCATTGGAGCCACTGTCTCCAGTTTCCAGTAGCCTTTGTCA
CTGCCCTAGGAGACAGGGCCATAGCTTAGTGTCACCCCTTCCTCTTCCCAGGCCCTGGGT
GCTACTGAACCATCCTGCCCTGGCTCCCTTTCTCAGCCACAATCGGCTGGGACTGGATTT
GGGGAGTTCATGAATATTAGGCTGTGTGACCTGCTAGCCTGAGGGGACACCTGGTAGGTA
CTAAGGGTTTCAACAGGTCA
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