SelenoDB
Release 2.0
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Promoter Report for SPR00001270_2.0
Identity
PromoterSelenoprotein U1 (SelU1)
SpeciesIctidomys tridecemlineatus (Squirrel)
Promoter IDSPR00001270
Promoter release2.0
External IDNone
Transcript SPT00001205_2.0
Annotation
Prediction method(s)
Promoter prediction (5000bp upstream, N/A) [Report annotation error]
OrientationForward
Structure gene structure

FeatureCol PromoterCol Coding exonCol Non coding exon (UTR)Col IntronCol SECIS
ResidueCol SecCol Cys or Other

Toolbox
Sequence
>SPR00001270_2.0 # Promoter # Selenoprotein U1 (SelU1) # Squirrel (Ictidomys tridecemlineatus) Full length # Forward
GCATGAGCAGTAGCACAGCCTTGCTTGTGGAGTGGTCTGATAAGGATGCTCTAGTGGCCT
GGGAGGAGGCCAGAATGGTGGGCTGAAGCTAAGCTGTGAAGGTCTGTGCCAAGAAGTTTA
TTGTGAGAGTCTGAAACCAAGGGAAGGATATGGGCGGGTCAAGGTGTATTAAGATTGCTC
TGCTACAACCTGGAGAAAAACTAAAAAAAAAAAAAAAAAAAAGCAGAGTCAGGCCAAGTT
CAATTCTGTAGCTATTGAAGTAGACAGGGTGCAAAATAATTCAGTCTTGGGGTTGGATTG
TAGCAGTGAAGTCAAGAAGTGGGTAGTAGATACATTTTATAAGATGAACAGAACTTCCTA
ATTAGGTATGGGGAGGGAGGTTGAAAGGAGATTAAAATGTGACTACTAGTTTCTGGCTTG
AACAAATGGGCTAGAAGCTTGTGTTTTTCCCCAAGAGACAACTCCAGAAGAGAAATTAAC
ATGAGCGTAGGTCAGTTTTGATGGGGTACAATAGAGATATAAAACCTGCAAGTGGAAACT
TTAGGTCAAAAGCAGGATTGGGGATTTGGAAGTCAATACCAAGGTAGAGGCTAAAGTGCT
GAAGTAGGTGAGATCACTCAGGAAGGAAGTATGAGTTGAAAAACCACTTGCATGGCAGGG
AAAGCAAAGGGAGGTAATGAATAGATGCAGATGAAGGTCCTCAGTGATCCTAGCTGACTT
CATGGGCATGGTGTGAGGAATGGGCAAGGAAGCAGGCTGCCACAGAGAAAAGAAGCTGGC
TCTTTGATTCTGTTCAAGTGACATGTGGGCTGTATTAAGGGCTTTGCTTCATTAGTCTTC
CCTGGATAGCAGAGGGGGAGTCTGTTGGCACTTGGGAAATGTTATAATCTGCATGACTGT
GAATGACTCAAAACTTTGCTCAACTTTTTGAAGAGCTAGGGGGGCCTTGGCGGCTCTCCA
TTTTTTTGTTTGCTGAAGATTAACTGTTGGCAGCTGGGGGAGCCCCAGGGTGTCTGTGTG
GCCTGGTCCTGCCTATGGAGTGACTGAGCTTAGGGGCATAGGCTAGACTCCAGGGCCCCA
CCTCCAACCCCTCCCTCCCTGCCTTCTCTCCCTGCCTGTTCACTGTGGGTCAGCCTTTTT
GTCCGCAGAGACAGGGGTGGATGCTACACATGGTGAGTACCTGTTCTCAGGTTTAACCTG
CCTGAAGTTTGGGATAGGGACCATGTAGGGAGGGGAGATGCCTTGTGGAAGGAGGAAGGT
TCAAAGTTGTAAACTGAATGGGCAGGGTTGGGGGTGTTGGTGAAAAACCAAGAATGTTCA
GACTTCAAAGTGAGCTGTTTCTGCTGGAATCCTAGGATGTTACCTGGAAACTTTAAGTAC
CTGGGCACCCCCTCATTTTGGAGTTGTGGAAAATGGGGCCTGGGAAGGGATCAGTTTGTC
CTAAAGCACATCTGGGTTGTGCTCTCTATCCCACAGCTTCTAGACCTGAACTGCCTCTGA
TCTGCCACATCTGTTGTTTGTTTGTGTTCTTATCAACTTCACCTTCTGTGAGAGGAGGAT
CAGATACGCTCCATGGTGGGGGGGGGCGGTGATTGAAGACTGGTGGAGGCTGGCTCTCCA
ATAAACAACTTTATTATTCTCTTTTAGAGAGACTGACCCTTTTTTAATGGAAAAGGGATG
GGGCCTGGGAGAAGGAACATCTGGTGTGTGGTAAATTTCCTTTAGAAGATCATGATTTGA
CTGTCTTTGATGATTGAAGAATAAGTTTATCTTTTTAATTATCTTTAAAGACAAAGAAGA
TTATGCCTCTTGACTTCCACAGACCCATTTCTGAATGCAGTAGGGCAAGGTGTGACAGAA
AGATTACAAGGTTTGAAGTCTTATTTCTGTTGAGCCTGATCCAGGTGGCATTTATCACTA
CCTGCTGGCTCTGTGACAGTGGGGAAGCTAATGAACTTCTCAGTGTTGGCAGCTATAAAA
CAGGAGGGTTTCTGCATCATAAGACTGTAGAGTACATTAGCCATGTGTATCAAGTGACTC
TAAGGAAATTCAGAGTTACTGGTCTCCTTTCTTCCGAAGTCAGTGGTCTTAGAGGCCCAT
GTGGAAATATGTTATTTTATTTAGATATTAAAGCTCCTCCTGCCCACCCTTTTCCTGTAG
GTGGGAATAACTATGATCCAAGACTCAGGATCTGCTCAGGCTGTGCAGCAGGCTGTTGCA
TACACGCTCCAAGATGCCAGGACAGGGTTGCTTTGTAGTTATGGGGGCTTGGCTGAAGGG
TTGAACCTGTACCTTCTCTGGGTGTTTCCAGAAATCATTTTTCACGCTTATCATGGGCAG
AAGAGCCAGCTGCTGGAGGTCCACTTGGCACAGTGTGTTCATGGAGAGACCTGACTGACC
AGTAATCCTAATAATGCTCTGACAGCTTATTGCTGCAGGGACTGAGGATGCAGTCCACCT
CCCCAGAGTGGTGATGGTACCTTCAGCCCTGACATCTGCCCCAGTTAGTCTCCTTCCCAG
GTTTAGTCAGCCCTAGAAGGTCCAAGCCCTTCCATCCTGCTTCTTGTGTCCTACACTAGC
TCTAAAGCCACTTCTCCATGCATCTGTGGCTACCCAGACTGACTCTCATCCCTGTACTGC
CATAGCCTCATGTTCATTCCCTGACTCGACTGCTTTACCTTCTAATCTACTTTTCTGTTA
TTTGTGTGCCAGGCCTGCATCTCCTTGAGGATTGTTTATCATTTCATTTTATATTGTTCC
AAATTGTCCTATATTAAATAAGGTCAATGCTGTATAAATGTTCAGAAATAATTGTTAAGT
CTAGTTGAGTTGAATTCCCATGTTGTACTCTTAAGAAGACAGGCTAAATGCCTGTGGATG
GGCAATAGGGGAATGGAGCCTGTTTGCCTCTAAGTGCAACTAGGTTGTATCTTAAGGATG
TGGAGCTGACTCTAAGGGTCTCTGAACTTCCTGAATTCATTCATGTACCAAGTCAAAGCA
AGTCTATTTGTAGAGTAGATTAAAGCTGGCCTTTGCATACTGAAGCAGAAATGTTTACAT
CTGATCAGATACTACTCATGATCCTAGATCCTACATACTTGTCAGAAATCCAGAGATGTT
TTAGAAATGTGTAAATATATATAGAAATTGTTCCAGGCATTGTGGAATCTCAGCAGGTGG
TTGAGAACTGTGATTTTCCTCCTGATTATTCTGTGAACTATAATCCAGTAATGTGTAACT
TTGCCACATGAAAGAATTGGAAGCAAGCCTGTGAAAGTTTCTTTCCTGTTTGGTCTAAGA
ACTTGATTGTTTGTGAGTTGTTTTCTTCACCATTCAATTCTGTTGAGTTCATTTCAGCAC
ACATTTGTGGTGAGTCCATGTCTGTGGACCACATTTTGAGTAGTATGGTTTTAAGAAACT
CTTCTCCAAGCAAGAGTCTCTCACATCAGAGATACCACAGCAGCAACCCCCTCCCTAATT
CACATACTGACTTCTCTGCTGTTTTTTCCTTCCCAAGTACATAGATGCCAGATCGTCTTT
CTGAAATGCCGTTTTCATTTAGTCACCCCTTGTCAGGAAGTTCTCTTTCATTTCTTAATT
CAATAAAATCTGGACTTCTGAGGCCGACCTTAGTACTAGTCTGACCTACTCTTTTCTTTC
CCAAAGTCATTACCACCAAGTTGTAGTGTCTCCCTTACAGCCCCATGGATTTCCAGACTT
TTGCTTGGACTTTGGAGAAATTCTGTATGAGCCAAGTCCTGAAGGGGCAAGTTGAGGTTG
AGGGTAAGTGAACCACATATACCCCAAGGCCTGTCCCTAGCAATCTAAGTATACAGAATC
TGGCTGGGATATGGGAGAAAGGCAGGAGAATAAGTCAGATCCTAGGATGGCATAAGAAGT
AATGGAAGGGTACATGTTTAAGTGGTTGTCAGGAGAAGGAAGGTTTGATAGGGTCCCTAA
CACTGTGATAGGGGTGTGCTGCTTCCAGGGTTTTCTACCTAGAAGCATAAGCATTCCCAG
CTGAAGGGAATTTTACTACTGAGTGTCCAGGCCCTGGCTGGGAATAAGACAGTGTTCCAA
TAAAATCTCCCTGGGACTCCAGTTCACTTGCAGAGTCCCATACTTTGGAGACACCTTTTG
CTAGGCTACTTCTGAAGCACTTGCTTCTGGGCATAACACATCCCTCCTTAGTTCCTTATT
TCCCTCATTCAGCAGACACCATGCAGTTCTGTTCACAGTGGGAAAATGGCAGGTTAGACA
AGGTATTTAGCAGTTGCTATCTCTTGGTAGTAGGCTTTGGAGGATGTTTGTTTTCTTGTC
AACCATAATTTTGTGTATTGCCTCTTTGCTATTTTTTTGTTTTGTTTTACCATGAGCCTA
TTGTATTTCTACATTAACTAGAAAATAAAGCTATTCTCAGTTGGGAGAAGTTTGCTGAGA
TTGTCTGCCTACCATGAGTGGGTCTTGCTGGGGCCTTAATGAATAGAATATGGTCCTTGT
TTCTGGGGGATTTTTCCAATTAAAAAGGAAAAAAAGGTAGGGTAACAAAGCAAGTATCCT
CTAATCATGGAAGAGAAAGCTGTCCCTATCTAGATAGGCATAGCTGAGCCACTTGTATCA
TAAAAGAGTATCAGAGTTTGGAGAGGAAAGGAAGGAGTCAAGGGGTCACAGCATGGCAGA
GCACTGCAGAGTTGGGGGCCACCACCTTAGACTAAAGGAGAGGGAACAGCAACAGAAGTC
CTGAGAATGCTGTCATTTCTCTGTCATTACTTCTGACCCCCTGGTGAGTTCCTTGGGGCA
CTAATTACACATCTGTCATATCTTCAAGCTCTATTAACTGGCAGGTGGTTAGCAGACCTC
ATTCCACATTTCTGATCCTGCTTCCCCTCCTCCCTTGGCTTCCTGGCCAGCTGCCTGCCA
GAGCCTTGGAACCTTACTCAGGAGATCAGATTCCAGCTGTCCTGTGGAACCAGTAACATC
TTCCTTCCTCTCAATCTCCA
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