SelenoDB
Release 2.0
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Promoter Report for SPR00001274_2.0
Identity
PromoterSelenoprotein W (SelW)
SpeciesIctidomys tridecemlineatus (Squirrel)
Promoter IDSPR00001274
Promoter release2.0
External IDNone
Transcript SPT00001209_2.0
Annotation
Prediction method(s)
Promoter prediction (5000bp upstream, N/A) [Report annotation error]
OrientationForward
Structure gene structure

FeatureCol PromoterCol Coding exonCol Non coding exon (UTR)Col IntronCol SECIS
ResidueCol SecCol Cys or Other

Toolbox
Sequence
>SPR00001274_2.0 # Promoter # Selenoprotein W (SelW) # Squirrel (Ictidomys tridecemlineatus) Full length # Forward
CATGTGTGTCGTGTGTTGGGCGCTGGGTACTGTCACCCATCCCACCCTGCAGCAGGCTGG
CGGTGGCTGCGCCTGTGGATGTGTCGTGACGTGGCTGGCCACTGACGGGCTGTCGTGGTG
ACCTGTGGCTGAATAAAGACGGGTGCTGATGTGACTGTGTCTCAGTTGGGCTGCGTTTGG
GCGAATGTGAAGTTGTGCAGTCAGGGGAAGGGGTGCTGGTGTCCCCCTGGGGGCTGTGTA
AGACACACAGGGGCACGGATGAGTGCCAGCCTGCGGCCACTGATTTCTCTAGCCTCTCCT
GCGGGGCCACAAGGGCCCCTTTGTTCTCAGTGACAGAAGAGGAATGTCCCTCCTCTCGTG
AGGTCCTGGCAGTGCTCTGCCACTGAGCCGTGCCCTGGGACTGCTTGTCCCCGCCATCAC
TGGTATGCACTATAGAGCCACAGAGAGATCACCTGGGGCCTCTGAACAGTGCTGTTATGG
GTTGAACCGCGTCCTGCGCAAAATTCCTATGTGACAATCCTAACCCCCTAATCTCTGAAC
GTGACCTTATTTGAAAATAGGGTCATTAGGGATGTCATTAGTTAAGGTGAGGTCACATTG
GAGTACAGCGGGTCCCTGCTCCAACATGGTTGTTATAAACCAGGGCACAAGGACACCGAC
ACTTGCGGACATGGCCCGTGAACACGAGGTGAGACCGGGTGGGGTCTCTGCAACCACAGA
GGGAGGGAGCACCAGAGATCCAGCGACCCACCAGAAACCAGGCCAGAGTCTCCCTCAGGG
TCCTTGGAAGGAACCAGTCCTGATCTTGATCTCAGACTTCTGGCTTCTGTAAGAAGTTTC
AGCCAGTTGGTTTGTCCTTGGTGAGAACCGCCCAGAAGGCACAGGACTTTCTCTACATGT
TGGAGGATGAGCAGGTGGCAGAGGGCAGGAACAGAATGTGCAAAGGCCCAGAGGCAGGGC
TGTGGGTGAGGTCCTTGAGGAAACCTCAGTAGAGCTGGGTTTGGCAGCATTGGAGGGGCC
AGAGAGTCACCCTGGGACCAGGGAGAAGTCGGTCATGCCACGGTTTGGGTCTTTGTTCTG
AGGACACTGGCTCTATTTATGAGGCACTCACACTTCTCGATGCCCTGTGCTAATTGCTAT
TCCAATACTTGCTCCTTAGGTCTGATGCCAGAGATGGGAACTTCTTTTTTTTTTTTAATT
TTTTAATATTTATTTTTAGTTTTCGGCACACACAACATCTTTGTTTGTATGCGGTGCTGA
GGATCGAACCCAGGCCGCACACATGCCAGGTGAGCGCGCTACTGTTTGAGCCACATCCCC
AGCAGAGATGGGAACTTCCTTTTTTTTTTTTTTTTTAGAGAGAATGAGAGAGGAGAGAGA
GAGAGAGAGAGAGAGAAAGAATTTTTAATATTTATTTTTTAGTTCTCGGTGGACACAACA
TCTTTGTTGGTATGTGGTGCTAAGGATCGAACCCGGGCCGCACGCATGCCATGTGAGCGC
GCTACTGCTTGAGCCACATCCCCAGCCCAAGAGATGGGAACTTCTGACCCAGTGAGCACC
GCGATGAAATTGGGCCAGAGAGCAGGAGCACACAGGTAAAGCTTTCATTGGGTGGCTTAG
CCTCAAGGAGAGGGGACACAGCACTGATAGAATTAGGCTAGGTCCCCAAACAAAGCAAGA
AGCTATTTTTACTTATGTGTAAGGTTATAAGAGGTGGGTTAGGGATTGGGATGTTTTTTG
TTTTGGAAATCAAACCCAGGGCCACTTAATCACTGAGCCACATCCCCAGCCATTTAAAAA
CATTTTTTACTTAGAGACAGGGTCTCTCTAAGTTGCTGAGTCTCCCTTTAAACTCTCGAT
CCTCCCACCTTGGCCGTCCGAGATGCTGGGATTACAGGCCACGGTGCCCAGTGTGTTTAG
AAATTTTAATGGAGTTTAGATCTTTAAAAAAAAAAAAAAGATTTTTTTTTTCCCCTGCGT
GAGCACTTTGAGAGATGGTCAGTGTCAGTTTAGAGCCAAACTTTACATCTGTCCTGTTGA
TGCTGTATCTCTTTTAATCGTGTTTGCCTGCAATAAGGTCACTGCAGCTGTTAAGAGAAT
ACATGGGTATGGCTTTGCACACCTGTAATCTCAGCGACTGGGGAGGTCTGAGGCTGGAGG
ATCACAAGTTCAAGGCCAGCCTGGTAACTTAGCCAGACCCTGTCTCAAAATAAAAAGGGC
TGAGGAAGTAGCTCAGGGGTAGGGGGTTGGGTTTGTCTTGAGTCCTTTGCCCTGATCCCC
CAACAATTTCCTTCTCTTATCTAGTTTATCTTTGAAAATGTTAAGGCAAAGATATCTTGG
CTAAAGAGGCATCTGGTTTGGTTTGGCTGGGTTTTGTACAGGGGTGTGTGTGTGTGTTTG
AATCAGGGGCCTGTGCCTGCCACTTGCTAGGCAAGTGCTCTACCACTGAGCCACATCCTC
CACTCCTTTTATTTTTTAGTACCCATGGGGGCGGCTCAACTATCGAGCCACACCCTCAGC
CTTTTTTCTCTTAGAGACAGGGTCTCCTGAGTTGCTAACTGCCTAGCTAAGTTGCTGAGG
TGGGCTTTGAACTCCTGCCTAGGCCTCCCAAGTCACTGGGATTACGGGCGTGCGCCACCA
CGCCTGGCTTTATGCTTACTTTAGAGACAGGGACTCCTTAAGTTGCTGAGGCTGCCTTGG
AACTTGGGTTCCTCATCCTCAGCCTCTGGAGCCGGTGATTACAGGCGTGCGTGCGCCACC
ATACCTGGCTTTTTTTCTTTTCTTTTGAGTGCCTGTGGAGGTACCTGTCTCAAATCCTTC
CAAAATAACACAGCCAGCGAGGAAGATGGAGGGGGACGTGAACTTTGCCAGGAGAGGTCA
AGCGAGGACCCCGGAGGTAGAAGGTGAAGCTGGTACCTCCTCATCCACGTGTAGTCGGGA
GCCAGAGCAGCAGGGGGCACCCAGCGAGGCGGTGAAACGAGAGACCATCGCCCGCAGGCG
ATCACGCCCACCTCGCAGAGTGGGGCACCGAGGCTTAGAGAGAGGAAAGGGTCTTAAGCC
CTCAACTCTGCAGCCTGCTTCCATGACCTTCCGTGGATCCCTTCGCGGGGAGCCGGGATG
AAGGCGCAGAGTGGAGGGCTACATGGTTATGAGGCGCCTCAGGGCCGGCGGCTGGGTTTG
GAACGCTCGCCGGACCCCGCAGCCTCCCCTTCGACGTCCCACTGCCTACCCCAACCTTTC
GGGGCTCCGTTGCCTCTTGGGGTAGGAGAGGTCCCAACCCCTCCCCGCGCTTCGGCTCCT
CCGCCCTCTTCCAGCCGCGCGGTAGCGTGACAACGACGCAGCCAATTCCCTGCCACCGCC
CCGCTGGGCTGTACCGTGCTGGCTGGAGTGGCGGGGGGAGGAAGGGAATGCGTGCAGGGC
TTGTCCCAGGCACTCCCTCCATCCAGACACCGACTAGCCCGACAAGGGGACAGTAAGGAG
GCTGCCCCGGGGGTGTCGGGTCGCGGGCCGCGGGGCTCTGTGGCCGCTTCGGCGCCGCGG
TGTCCCTCGCATCCCCCCGCTCTCTGCATTGGTTCGCGCCGCGGAGCTCGAAGAACCAGC
CGTGTGCGCGGTGCCCGAGACACAGCGGTAGCGAGTCCGCGGAGCTCGGTCAGGTCGGAA
GGTCCGCTGTGCGGCGGCTGCTGCGTGGCGATCATGGCTCTCAAAGTCCGAGTCATTTAC
TGGTAAGCGCGGAGGCCAGGGGCCTCTCCCTACGGCGATTTCCGTGCGCTCGGAGCGGGG
ATGAGGCGTCGGGGGCTGGATCCCAGGCCCCGGGAGGAGAAAAGCGGCTGGGTGGGGCCA
GGAGGGGTGAGGGCCGCGGGGAGTTGAACCCCTGTTTGGGACGGGCGGGACGTCTCGGGT
TGTGAAGGGTCCAGCGGAGACATGTGTGTGGCCGCCGCAGACGCCAAGGGGCTTGGCCGC
GGGTCGGGTGGATCTGTGCACTCCTGGGACTGACCCCTCCGCTATGCTCCGATTCCCCGC
CCGCGAACAGCCCCTGGGTCAGGACGGCCTCCTGCACCTTCCTGGGTTTAGATAAAGACG
CAAATGACAACCTTCGCGCCGGTGCCCGTGGGTGCCCGTGCTGCCAACCCCTCTTCTCGG
GCCACAGTTCCCCTTTCGGTAATGCGAAGAGGGCGAACGTAGTAGCTCCTGCCCAGGGAG
CGCTGCACACCAGCCCCGACTGCCTTTGAACCTATTTCCTCCGCTCAGAGGATCTGCCCT
GGCACCTCATTCTATGCTAGCATGCAGTAGGTGCTTAATAAATACCGGCTCAATGAATCT
ACTGCCCCCTGAACCTTTTGAGGGAGGGGAATTCTAGCTTCATTTTACGGGGCAGGGAGA
GGGGAATGCAGTAGGTCGTGGTCCTGGCTCAGACCCGGGGGCCACTCCAACCTGGGTGGC
TGACCTAATTATCTGGACTCGCACCCAGGATCCAGTGGGTCTCCGTTTTGGGAATGCCAT
GGCCTGTTAGAAGCACAGCTCGCTTGACATTTTGAGTTCCCAGGAGGCCTGTGCACCAGA
TTCCAGCCGGAAATGGCATCCTGGGTGTTGGAAGGTGTTCAGGTTCCAGGAGCGACAGGG
CTTCCTTCAGTGCTCTGGGCCTGGGCCCCAGCCGAGGTTGCATGTTGTTTATGCAGCTCT
TGTTCTAACCCAGAGCCCTCCGTTTTCTTCCCTGTTGCCTTCCCTGCCTCATGTGGCCAC
ATAACTGTGATCTGGTCACCCCGTCTGCGGCCTCCCTCTCCTCCTTTGCCTGGCTTGGCT
CTTTTTCTCTGCTGTTTCCTATTACACTCTGGTGTCCGTGTGTCTTTCTTCCCTTCTCTG
TCTCTTCTGCTTGGTCATTTCTGCCCGTCTTATTCTCTTCTCTTCCTGGTCCCCTCTGTC
CTGCCATTACTGCCTGCTTTCCCTGTGTCCCCACCTGTCTGCCTGTCCTGGAACTCCTCA
CTTGGACTCCACCTACCAGT
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