SelenoDB
Release 2.0
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Promoter Report for SPR00001278_2.0
Identity
PromoterEukaryotic elongation factor (eEFsec)
SpeciesIctidomys tridecemlineatus (Squirrel)
Promoter IDSPR00001278
Promoter release2.0
External IDNone
Transcript SPT00001213_2.0
Annotation
Prediction method(s)
Promoter prediction (5000bp upstream, N/A) [Report annotation error]
OrientationReverse
Structure gene structure

FeatureCol PromoterCol Coding exonCol Non coding exon (UTR)Col IntronCol SECIS
ResidueCol SecCol Cys or Other

ToolboxForward   Reverse    
Sequence
>SPR00001278_2.0 # Promoter # Eukaryotic elongation factor (eEFsec) # Squirrel (Ictidomys tridecemlineatus) Full length # Reverse
CATCGCCGTAGCTAGCTTTGCTGTGTGCATCCCGTGTCATCTAGCGAGGAAGCACAGACA
CTCCAACAAAGTCCCAGAGTCGGGGACTAATAGGCCGGCTGCGGTGGCGCACGCCTGTCA
TCCCAGCGGCCCAGGAGGCCGAGGCAGGAGGATCGCAAGGTGGAGGCCAGCCTCCGCCAC
TAAGCGAGGCCCTAAGCCACTCAGGGAGACCCTGTCTCTAAATAAAATAGAAAAAAGGGC
TGGGGACAGGGCTCAGGGGTGAAGCACCCCCGGGTTCAACAGAGAGACTCCAAACCCTAA
CGTCTCCCAGAAGGTAGAGGCTGATTTCTCTCCCGTTGAACAGTCCAGAGGCAAGTAGTT
CAGGTTCGTGGGGGGCCACCCTGCTCCATAGAGTCCTTCAGGGGACCCCGGTTCCTTCCG
TCTGTTTCATTTAGAGACAAGTTCTCCATGAGCTGCTTAGGGCCTCGCTTGGGCTGAGGC
CGGCCTCCAACTTGCCATCCTCCTGCCTCAGCCTCCGAGTCGCTGGGATTCCAGGCCTGC
GCAGTCAGAGTCCAGGTCCCCGGGGGGATCTGACCACGGGCAAATCACCTTCCCTCTTTG
AGCCTCGGTTTCCTCCTCTGTAAAATTAGGCGCGAAGGTGACTTATGTGGAAGTGTTCGC
CGCGGTTCATTGTGTCTCTGCCTGAAGGTTCACGTGACAAAGACAGGGGCGTCTCCATGG
TAGTGATATGGGGACACTTGGGACCTTGAAGAGATGGGACTTAGAGGGAGGCCCTGAGGT
TAAGAAGCTAGGTCATGCTGTTTGAAATTTCGACCTCCCAAACCGTTGGGCTTAAATCAA
CCTTTTTTCCTTCACCCGTAGCCTACGTCAGGTATTTTGTCACAGTCTCAGCGGTCCACC
TTGCCTAATACAGAGGCTGTGGTTGGAAAGAGCTCCTGAGACAACTGGGTTTGTCTCTGG
ATAAGCGGACGCTCTCCAGCTACGACAATCCCTTCCCTTTTGGATTCTTCCATGTTTGGG
GCCCCTGAAAATTTGCACATTTGTTACATGGTGTCCCCAGCAGATGTATCTGGGCCTATA
TTCAAGGAGGCTGAGGCCACGATCCATCTTTAAAGGCACCAGATATTTTAAAACAAGAAG
CCGGGCGCAGTGGTGCAGTGGTGCACCTGCCTGTGATCCCAGCAGCTGGGGAGGCCGAGG
CAGGAGGATCGCAAGGTGGAGGCCAGCCTCAGCCACTGAGCGAGGCCCTCAGCCACTCAG
CGAGACCCTGTCTCTCAATAAAATGCAAAACAGGGCTGGGAAACGGGGCTCGGGGGTTAA
GCACCCCTGGGTTCCATCCCTGGTACCAATAAATAAATTATTGGTAAATAATTCACTAAG
TATAGGTTAAATAAATTAATTAAGTATAGGTCAATTTTTTTTTTTTTTTTGGTTAAAAAT
AGAGGTTCTGCTGTGCCCAGGTCTCCCAGGGGGACAGTTCAGGTGGAATACAAGGGAAAG
AGGAGTCAGCCCAGGAAAGGTTGGCCGAGAGCCAGCAAGGAATGTTCCAGAAGCTGCGTG
GGGAGTGCCGTCCTTGGAGCTCTGAGACAAAGGCAGGCGGGGTCCGGGGAGGAAGGACTC
CGGGCGGCTCTGCCCTTCCTGCCTGTGGGCCCTGGGCTCTGCAGGCTGCAGGAGACCCTG
GTGGAGGGCACGGAGCTGCCCAGAGAGAGATGTCAGCCGCCCTGATCAACTGAGCCGTGA
AATGCACCATATAAATGTCCCCCTCTTGCACATTTATATGGAAATGCATCTTTGCAAGTG
ACCTGTCATTTTCTAGTCGAATAACCTCAGGGCAGGGCTCCCCCCCTTTGCAATCTGATT
ATCTCTTCCTGAGGTTCAGGGCTCCCAGGAGTGGACCATTCCAGACACCCCAGGGAGCCA
GCATCTGCCATCCATGAGTGCTCAGCAGACACATCGGATGACATGCTTCGTGTCCCAGTG
TGGCCCTGGAATCAGAGGGAACGCATCTCCCCTTTTGCCCACCGTGAATGCTTCTGAGCC
CACCCTTCCTATAAAAGTGCGCAGGGTGGCCGCACGCCGGTCATCCCAGCGGCTCGGGAG
GCTGAGGCAGGAGGATCGCAAGGTGGAGGCCGGGCCTCAGCCACTTAGACCTCCAACCCG
GGGCCTCGCACCGCGGTGGTCAGCAAGCGCTCCACCCCTGAGCCCCCAGCCCCAGCCCTG
ATTTTCTTTTTTCTTTTTTTTTTCTTTTCTTTTCTCTAAATGGAGAAAATTGTATTTCTC
CATTTTCCTGCCGTGACCCCGCCCCCCGCCACCACCACCATCCCCCAGTTTGGCGCGGAC
ATAAACGATGCGTGTGTGAGTGGGTGTGCGCGTTTACTTACTATTACACATTTGGAGGTT
TGGCGGTGTGATTTCCCCGCTTCACAAATGCAACAGACACATGACTCATCCTCCGCAGGA
TCCTGAGGAGCTATTTAGGGTGATTCTGAACCTTCTTCTTCGTCTTCATGTGGCCTGAAA
GATTTTTTTTGGGGGGGGCAGGAACCCTCACGATGGTCACCCGCCTCCCGTTCTAATACT
GGACCTAGCTTAGCTGTCGCCGGAATGCATGAGAAAGGGGTGAGCATTCGCCAGGAATCT
GAAGGACACCCCACCCTTGATGATCTGGGTAGACGTCCTTTTTGTCTTTCTAAGTGCATC
GTCTCAGATATTTGTTACAGTCACGGAAAACGGACACCACAGCGCGGCCCCAAGGTGGCC
ATTCTGCCACGGGATCCCAGCTCCTAAGACATTCAGAAATCCCCCGATAAATTCTCTAAA
GTAAGAACGGTGCACCTAGGAAGAGTGTGCACAGGTTGACCTCTGAAATGCGTTCCGAGT
GTATCGGCTTGTTTTCCGTTGCTATCACAGAATACCCTGAGACGGAGCCATTTAGAAAGG
AAAAAGGTTGGCGTGGGCTCACAGTTCTGGAGGCCCGACAGCATGCTGCTGGTGTCATTT
AATCTCGGGCTCCTGATGTGGAAAAGGAAGGGCAAATCGGACACCCGGAGGAGAAAATCA
TAGCCGGGTGCAGCAGTGCAGGACTGTCATCCCCAGCCGCTTAGGAGGCTGGAGGCTGGA
GGATCGCAAGTCGGAGGCCAGCCTCAGCCATTTGTGAGGCCCTCGGCAACTCCGCGAGAC
CCTGTCTCTGAATAAAATACAAAAAGGGCTGGGGACGGGGCTCGGTAGGGGGGGAATTCA
GCACCCCTGGGTTCCATCCCCCTAAATCATAAAAATAAATAAGTAAAATGGTCTATAACA
CACACAACTTGGTTTTTCCTGTTTTAAGGCCTGTGGTTTATGAAGAGCGAGGCCAAATTT
TTTAAAAATTTCTGGTTTGGGGAACCCTGCCCAGTTCTCCCTGCATTTACCCGGATGCAC
CCACAGCGTGCACACCCCTGAAGATTCCAGTAGGGAAGGCTTGGTCCCTGGGGGCCGCAG
TGTTCAGTTTTGTGGCTTTTAGGAAATGATTGGATTTTGAGGGCTCTGACCTCATCTGTG
GATTAATCTACTCGATGGATTAATTCTTTGGATGGAAACTGTACAGAGATGGAGGCTGGT
TGCAGGAAGTAGTAGGGGGTGCACCCTGGAGAAGTAGTTCTTGTGTTTCCTCCCTCCCTC
CCCCTCTCTTCATCTCTCTCTCTCTCTCTCTCTCTCTCTCTGTCTCGCTCTCTCTCTCCT
CCCCTGAAACCATAAGCCCCCCCCCCACATCGACCTTTCGTCCTTTTAAGTTGTTTATGT
CAGGCATTTTGTCACAGAGACCAAGAGTTGACTAATGCACCAGAAAACCAAGAGGCCACC
TGTGACATGAGGAACAGGGTTGTCGGATCCCATCTCTCTGGAGACTCTCCAACTCCTTGA
GTTATGAAACTCTGACACTCACCTCAGGGGGAAAGGAAGCCCGGAGGAGGAACTGAGCCT
GTGTCAGGCTCAATCACTGAGGAGTCCATTACAGCATAACATATGTAAAGTGCGTTGCTC
AACAAATAAGACTGTGTCCTTGTTCTGCGTGCAGCAGTCGCCAAGAGATACAGATTTAAA
CATAGAAACAGCCAGCTCCAGCCACATCCCATAATTGGACGGTGGAACTTGAACTATGGC
ACAGAGTTTACCCCTGAGGTTTGCAAATTCTTGTCAGAGCCGCACAGTTGTTATTCCAGC
CACTCGGGAGGCTGAGGCAGGAGGATCGCAAATGGGAGGCCAGCCTCAGCCATTGAGCGA
GGCCCTGAGCCACTCAGCGAGACCCTGTCTCTCAATAAAATGGAAAAAGGGGCTGGAGCG
CCCCTGGGTTCCATCCCTGGTACCCAAATGGGACAAAAAAGATAAAATAATAAAATACGC
GGGAGGCTAGCCCATTCTGGGTTTGGGACATTCCATTTTGAAAGGTGACAGAATTCCCCA
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