SelenoDB
Release 2.0
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Promoter Report for SPR00001796_2.0
Identity
PromoterMethionine sulfoxide reductase A (MsrA)
SpeciesOchotona princeps (Pika)
Promoter IDSPR00001796
Promoter release2.0
External IDNone
Transcript SPT00001731_2.0
Annotation
Prediction method(s)
Promoter prediction (5000bp upstream, N/A) [Report annotation error]
OrientationForward
Structure gene structure

FeatureCol PromoterCol Coding exonCol Non coding exon (UTR)Col IntronCol SECIS
ResidueCol SecCol Cys or Other

Toolbox
Sequence
>SPR00001796_2.0 # Promoter # Methionine sulfoxide reductase A (MsrA) # Pika (Ochotona princeps) Full length # Forward
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNATGGAGACCTGT
ATGAAGCTCCAAGCTCCTGGCTTCAGCCTGGCTCAGTCCCTGATGTTGCAGCCATTTGGG
GAGTGATGGAAGCAGATAAAAGATTGTCTTTACTCTGCAATTCTGCCTTTCAAATAAATA
AGTAAATAAATATTTTTTTTTCTTTTCGTTTCTTCCTTCCTTTTTTCCTTTCTTTCTTTG
AGAGGACAAAATGGAAAGCAGTGGCTCGCTTCATTCCATTTTCCCACCATGGAATGGCAT
AGGGCCCAAGATTCTGTGAGTCAGACTACATTCAAGAACAATTAGGTAAAATTTAACTAA
TGGCCCCTGCTATTTAATGAAGGTCAGGAGAAGAAAGGGAAAAGAAAGGGAGAAGGTTTT
GAAGTGGAAAAGTACTGAGTCAGAGTGGAGAGAAATGTTTCAGTCAACCTTCCCTGCACT
CCATCTCTGCCCCAATAAGGAGACTTCCAGGGACTGTGCCTGGTCTAGAAATGTAGTTAG
CAAGAGTGTGGCTTCCCTCCAGTAGGGCCCTGCTCCTTGGCTGCAACTTCCTTCTGCGGC
TACATCCCACGGCCCCTGCCCCAAGTCCAGTGGGAGGAAGGGAGCATACCCTGAGGTCTG
CCAACCAAAGCCTTTGGAATGGTGTGAGGTGGAACCTGAAGGATATGTAGGATTTTGGCT
TGGATCTGTACTCCTCAGCTTTCACTATTCTAGGTACCTCACATTTGCATTGTGTTTTAG
AATCAACAGACTGGTTTTCACAAGTAACCCAGCTGGGATTTTCACTGGGATTGTGTTGAA
CTGATAGATCAATGTGAAGGGAGAATTGGCATTTAACAATCTTGAGTTTCCTGACTGTTA
ACTGTGGTATATTCAGATCTTTTAATGTTTCTCTTAGAAATGTTTTGTAATTTTTTGATG
TACAGGTCTAACACATATTTATTCATGTATAGATCCTAAATGTATGATTTTTTGATACTA
TTAAATAGTACTTTTAAAGCTTTAATTTTCATTTTTTTTAGAGTACATTAACAGATTTTT
TAAATATGGATCTTGAGTCCTGCAATATTGCTAAACATACTAACTCTGTTATCTTCAAAC
TTTAACAGTAACTTAAACTGTGTGATGATATTCATTTAGCTGACAGGCAGGAGACAGCAA
GCACATAGATATGACAAGCTAGAAAACTGGTCACCTTTTTTTTTTTTTTATGTCACTGCA
AACATGTGAAAGAAAGTTGTCAACTCAATTCTTCGGAAGGCAGATTGGCTGCTCTTTGAG
TCTGCAGCAGTGGGGAAATGGTCACAGAGGTGAGATCCTGGCCAGGGACAGTATTGGTTG
CTTGCTGCCTCCTTTAGCCAGGCCCTTTGAGCAAGATGAATTCAAGAAAAAGTGAGTCAT
TTTGTGAACAGAGATGGGAGGCAATAAAGCGCTGCTAAAATTGGAGTTCTCTGACTGTAG
TCTCCGATAAAAATCGGCTGAGAGCAGGGATTTAGGGCCTTCTCGTTTTGATAAAGCCAA
GAACTACTATACCTCCAATAGTGGAAGATAAACTGTGACCCAAAGCCCTTCTCAAGAGCC
ATCAGCAATGCGTTTTTTGCTGGACAATAGGAGCCAGCCAAGCAGGAAAGAGCCTATTAA
GAGGATTGCCTTCCCAACTCAACCTGCTGTGTTTTGTGGGCTGCCTGGGCAATATACCCT
TTCAGTGAAATCAGGGCTTGCAGGTAAGAATAGTGGGTAAAACTGGTACCTTTAGAATGC
AACAAATAAGAGAATTCCTTTTAGAAAGTATTGCTGGGACATAAGTACGAATTACTTTCA
GTATGTTGTCTGTCTTGGAAATGTACTACCCTATTAGAACAGGCTATGGGCTACTCTTCG
ACCTTTCTCTTTTTTCAAATTGGTTTTCACATTCCTATTTTGCCATTGTACAAGGAGGTG
TTTGGGGGAGGGTGGGAGCAATAGGTAACTATTTTCTTTGCAGGTCATTGGACCTGAGGA
ATTACATCCAGACTTCCAGGGGTCAAAGTCGTGGACTTTTGGCTGAATGAGATATCCACT
TGGGACTTCGGTTTTCCCCAACTGGATCAGGGTGTGTTGTATCAAAAGTATAGATGGATG
TTTGAGCATGCAAAGGAGTGGATTGTGACAGAGCAGTCTACCAAAATACATTCATACACT
TTTCCTTTATTATTAGAATCGTGAAACCACTGTTAGTTGGATCCACAGTTTCTCCATTTA
AGAACTTCCTCTTCTCTCTTCCTGACAGTTAAATGGGATGATGTCTCTAATCATTTGAAG
GGAATTAGCACAAAGAGCGTGTGGTACTTTTGGCACACTCTCAAAATCACTGAAGATGTG
CGTGTCTTTCCTCTCAGTCTTTGCCAAGGTAGAGACATGATGGCAGGTCCTTCTTGTGGC
CTTTTGGACTCAGGAACATAGATCATGTCAAAGGATAACAGATTTGCCCTGCCAGTTCTG
GACTCACCTACCTCTGGATGATTATATGAGAGGGAAACACCTACATCTACACACACACAC
CAAGAAATGACTCTCTTATACCTCCCATATTTGCTTTCTTTGTTTTTTTGTTAAAGCAAC
TCAATCTATGTCCCATCCAAAACCTATGCCTAAGTTTTTGATTACAGCATTAAATGTCTA
TCTTCAGAGAATAGGGCAGAGCACTTACTGAAATGGAAAAGAATCTTTTGCTAAGCTAAG
TTAGGGTTTTCGTTAATTAATCTCCATTCATAACCACTGGACACTTCATGTTTTGCCAAT
CCCCTATGAGAGCTTATGGAAGTTAAGGCTCAGTGCTGTTCGGCAGCGGACCCTTCTTTC
TACACTCTTACATGGAAGAGAAATGAACTTCTTTTCCTTTTTTAAAGATTTGTTTACTTT
TATTGGAAAGGCAAAAAGGAGATAGAAAGATCTTCTATTTGCTGGTTTACTCCCCAAGTG
GCTGCAACGGCCAGAGCTAAGCCAATCTGAAGCCAGGAGCCAGGAGCTTGTTCAGGGTCT
CCCACGTGGGTACAGGGTCCCAAGGTTTTGGGACATCCTCCACTGCTTTCCCAGGACACA
AGCAGGGAGCTGGATGGGAAGCAGAGCAGCCAGGACATGACCTGCACTGATATGGGAATC
CCAGTGCCTTTAGGGTGAGGATTTAACCACTGAGTCATCAAACTGGGCCTATTTTCTTTA
GAGTGATGTTTTGGGTCTATTTTGTCATACTAGAGGGGATGTTTAGACTGCATCCTAGAG
AAAAATATATTGTTAGAATTTGTAGGAAACCCAGAGTAAAACTGCCACAATATCAAAGAA
ACATGTGTCAGTTGTGGAATATGAGCCTCTCCTCCTGCCCCCAGAAGTTGTAGAGCCTCT
GTTTGGGAGAGCTGAGAAGAAATGAGGTCAAGAAAAGGAAATCTCAGTGGTGAAAATGAA
GGCCAAAATACTTCTCTTCTAAAAAAATAACCTCAAAATACTCAATGCAGCTTTTCTTGC
AACTATTTTGAACAAATGTAATAGGAAATTGCTGCTTTAAGAAAAGATATTTTGAAATAA
AGGTTGTCTTTAAAATTTTTTTTAATGATTAAAAATATAGCCATTGGAACCTGAAAACAT
TTTAACTAAGGACACAGAACATTTAAGAAAGTTTAAAGAAAATATTTACAGAATTCCATT
CTGAACAACAAAACTGTAAACGCTTGCTTTTTCGTTTTTCTCATTGGTTGCGCCCACAGG
AGAGTGTGTAATTCTGTTGTGTTCTCACTTCACATTGAATGCTTCCTTTTAACATTAAAA
GTGCTTTAGGATTTACTTGTAGAGTATTTCTGTCCTGATGTTAACCATCAGGATGGTAAA
TCCACCATAAAACACAGAAAACGCCAATCAGTCTGTTCAACAGGCAATACTTTAGGAGAA
ATACAAAATACTTTCTTTGACAGAAAAACTATGTCCTCAAATGCTTAATGGTGACCAGGC
CCTCAGGAGACTGGTAGGATGGATACGCTAAGGTGTTTTCTGGAAAGGCTTACTGACTGG
GTATTTGGCATGAGAGAAAATCTCCTTTACAAAGTACCGGCTTAATCTGTTTGGTGTTGT
GTGTCTGGCCATAGTCTATACGGTGAGCTAATCCTGTCCTTATTACAGCCGGACCACATG
AAAACCAAGAGAAAGTGGGGTGAACGTCTTCTCATGTCTGTGGTTTCTAATCCGCTGTCC
CTCCCTTCCTACCACACTCCCCGCCCATTTTGGAAACACATCTGCATAAACCCCAAATCT
CACATTAAGGCCACTGTGGCCCCAGCTCCCATGTATTTCTCTAACAAATCTCATCGCCTA
TGACTGCAGAAACAACAGCACCATTCCATCCTCCTAAACTGCATGAATGGGACATGGGTG
CCTTGTTCCTCGATCTGCCCCCGTGCAATGGGCTGTAAAATGTTTTCTTTGTGTATGTGT
ATCACAGATGTGATGGATACATTTTCCCTATTCCGCACAGGCTGAGACCTCGTGCTTGGC
TTACTTGGGGGTGCATGGGTTGCCTAACTGATCATTTGTCAGGAACTTTCTTTAGCTGTG
CCTCAGGTAGGTCGTCTTCTAGTCCCGGGACACTCTGTTTAACTGCTGAACAAGGAGCAG
AAGGGGAACGAACTGTTAAAAAAAAAAAAGAACTGTTCCACTGGGCTAGGCGTTATTTTA
TTTATTATTATTTTTTGGCCTCTACCGCTTCACGTACTCCGCGCGTTTAGCGCGCTGGTT
CTTCGCCTGGGAACTTTGGCCCGAAGCACAGAGCGGACCAAACTCGCCGGGCGCGACTGC
GGACCAGGTGCCCTCCTCCTCGGGGAAGGAGCACCCCAGCTCTGGGTAATCTCGGCGCCC
GCCGTCTCCGCCCCGCTCTAAGCCGCAGGCTCCGTGGGCGGCGGTTTTCACTTCGGGACG
CCCCTCAGCAGGGCTCGCCT
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