SelenoDB
Release 2.0
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Promoter Report for SPR00001799_2.0
Identity
PromoterSECIS binding protein 2 (SBP2)
SpeciesOchotona princeps (Pika)
Promoter IDSPR00001799
Promoter release2.0
External IDNone
Transcript SPT00001734_2.0
Annotation
Prediction method(s)
Promoter prediction (5000bp upstream, N/A) [Report annotation error]
OrientationReverse
Structure gene structure

FeatureCol PromoterCol Coding exonCol Non coding exon (UTR)Col IntronCol SECIS
ResidueCol SecCol Cys or Other

ToolboxForward   Reverse    
Sequence
>SPR00001799_2.0 # Promoter # SECIS binding protein 2 (SBP2) # Pika (Ochotona princeps) Full length # Reverse
TCAAAGAAAAGGCAGAATGATTACAAACACATGAGCAAATAACTTAATATAAGTTGACAA
ATTAACAGCCTTTCCAAACAGTAATCAGACCTCTTCTTAGTGTTCACAAAATATCCTAAA
GTATTAGCAATGTCAACTTTATGATCAAATTATTTAGACAGTCTTCAAGAGGTAAATTAT
CAAAGATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCTCAGATTGTTCT
TGGTGTTCGATGATATCGAAAAGGCATAGCGGTGTCAACTTTAATGATCAAATTATTTAG
ACAGTCTTCAAAGAGGTAAATTATCAAAGATTACCAAATTTCAATGAAATCATGCCTTAC
ATAATCAAAGCTGTTAAAACAATCGAGTACAAGGAAGTTATACCTCAGGGTCTAAATATA
AAGCTGGTAATAAAAACTGGCTCTTCAGACAAAACAGTACGTTTTTAACTAATTTTCTTA
AAGTAAAAAACCACTAAACAGAGTTTTGAAGGATAATTATATTTGTTTGAATAGTCTAGA
AAAAGCCTATTTTTGGCCATTTCAGGAAATTAGATTAGTATCATTAAATTAAAAGGAAGG
AAAATGTCTAACATGAACCAAACAAAACAAAAAAACAGACAGGGAAAAATCTCAGGCTCA
AAATTCAATGGCGATGGGAAGAGAGGATGAATACTCGAGTTTTCCAAGCAGACAAATCAG
CAACTAAAGTCATCTGTAACATGTACTCCCTTTTGGTTTACGTTCTGCATTTTTCCTTAT
AACAAATTCACAGAGGTTTAGAAGACAAAGAAACTACACTATTTAGGGATACACTGAGCG
AAAAGCCTTACAGAAAAGTAAGTATTCCATGAAAGTCAAAAGAATCAGCCCTAGGGAGAG
AGGGCTACATCTTAGAGAAACTTGGAGAGCTTCCAGATGCCTGACAGAGCTGTGTCTTAT
GGTGAAGTGTGCATGTATGTGTGCGTGTGTGTGTGCAACTTAGCAGGTATTCATTTTCCA
ATGAATCGTTAAGTTCAACACTGCATTTACATGATTTTCAGTGCATTAAATCGCAAATTT
TAGTTTACAAAATATCTATAACAACGTTAGATCCAAAGCCAGAAGCCTCCTCCAGGTCTC
CCAAGTGGGCAGAGGGTCCCAAGGACCTGGGCCATCCTCCACTGCTTTCCCAGGCCACAA
GCAGGGAGCTGGATGGGAAGCAGGGCTGCTGGGATAAGAACCAGTGCCCATATGAGATGC
CAGAGCATGCAAGGCCAGGACTTGAGCTGCTAGGCTACTGCACCAGGCCTAAGGGCAACT
ATTTAGCTTTGTGGTTAAGACAGCTACAGACTCACACTGCAGTGCCTGGCTTTAACACCC
TGCTCCAGCACCCTGCTTAGGAAGAACTTGCCCAGCCTGTAGCAGGTCTTTGTAGACATC
CGCAGAGTCAGTCTGTGGCTGGGAGATCTTGACAGATCCATCCACTTCTCTCTCTCTCAC
TTTCAAAATAAAAATAATTTTCAAAACTACATAAATGATACAATCTAAATAAAATTAAAC
CTCTTAGTGAAACCAATATAATAAAAGTCAAGTTTCTAATGACTCAAAACAATTACTCCA
GACACAAATGGTCCTAATTAGAACTTAGCATCAAAACAAATTTTCCAAGGTGACACTAAT
AACAAGTTGTCATGATTTCCAGAATAAATTTCAGTCATGTTTCACAAGTGTAGTCAATAG
CAAATCCATGAATCTAAAGACAAGAATTGATATATTCAATTACATGGTCTTTATTTGGAA
AACTTGTTTTTCAAAAAACAGTTCATTGTAAATATTCACAAATACTTCCTTAAAAAAGAA
GGGAAAGAGGATGGAAAGCACAAAATCTAAACACTACAACAATATTCACTCAATAACTTT
CCTGGCTCATTTAAGTTTGAAGTTTACATCTGCATGAATCAAATCTAAATACTGGAGAAT
AACGTTTATAAATATTTATTAACTCAGTTGGATTTTTGGATTTTTTAAAAAAGATTTATT
TATTTTTATTTCAAAGTCAGATATATAGACAGAGGAGAGACAGAAATATTTTCTGTCCAA
TGATTCACTCCCCAAGTGGCCACAACAGCCAGTGCTGCACCGATCCAAAGCCAAAGCCAG
GAGCCTCTTCTGGGTCTCCCACATGGCTGCAGGATCCCAAGGCTTTGGGCTGTCTTTGAC
TGCCTTCCCAGGCCACAAGCAGGGAGCTGGATGGGAAGTGGAGCTGTCGGGATTAGAACT
GGTGCCCATATGGGAACCCAGCACATTCAAGGCAAGGACTTTAGCTATTAGGCCACTGTG
CCAGGCCTTGATTTTTGAATTTTAACATAAGCAGCAAAACTCCTTCAAATGCTAATAATT
TAGTAATTTTCACTTTATGGATTCATTAGAACCTCAAACTTAGGTAAAGTACAATAAATC
AAATCAATATAATGCTTCCCCAATTAGGATAAAGCAATCTTTCAGTGATAATACATGAAA
AATGGTAACTTGTTTTACACAGTTCACACATATGTATAAAAAGGAGGAAAAGCTGATTCA
CATTTTAAATGTAAGCGTTGAGATTTTGTTGTAGTTTAGCAAATTAAGCTGCCACCTGTG
ACAATGACATCTCCTGTGGACACCAGTTAGAATCCAGGCTGCTCCACTTCCAACTTAGCT
CCTTGGTACTGCTCTTGTGAAAGCAGTGGAAGATGGCCCAAATCCCTGGATCCCTGCTTC
CAGATTATCTCCTGGCTCCTGGTTTTGGATTGGTCCAATCCCAGATGTTATAATCATTTG
GGGAGTAAACCAGTAAAGGGAAGGTTTCTCTCTCTTTGGCCCCCAATCTCTCCATAACTT
TGTTTTTTAAATAAAATGAAAATCTTTTTAAAAATTTGTTTTATTCTGAAAGTGAGGATT
CCTTTCGAATATAAAAGAATTCTCTGAATGGAGCCACCACTGTCGTGCAGCAAATAACGC
TGCTGAATACAATACAAGCACCCTGTATAGGTGCCAGTTTAATCCCAGCTGCTCCACTTC
CCATCCAGCTTTCTGCCAATGTGCCTAGGGAAAGCAGAAAAATCCCCAATCCTAGGGGCC
TTGCTCCCACACAAAGACCTGGATGGATTTTCTGGCTCCTGGCTTCAGCCTAGCTCAACC
CCAGCTGTTGAGGCCATTCTGGGCAAGGAACCAACAAACAGAAGCACTCGTTTTCTCTCT
CTCACTCTAACTTAGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCCTGCACCAACCTGACCT
GACCTTCCAGCGTAACTCGATGTGAGGACCAACTTCCTCCTTCTTCAACCATCTCTTCCC
TTGTATAATTCCCTCCCTGTTTTCCTGTGTCCAAGCACCGTTCTCTTCTGCTGCCTCCGA
GACAGTATTCTGGCCATCCCACTTACACTAACCTGAGCCTAACACAAGACAGGATTACCT
GCTCATTAGTCCTCACTCTGACTCTGTCTCAGACTTCAACACCTGTCTTTGCTTCCTTCT
CCCTCAATTTGCACCAAGTCTTATCAATTCTTCCTCTTTCCAAATATCTTACTTTACAGT
CTGAGTTCCAGAAGAGACACGCATGCAGCGGGAGGGGAGGGAGGCTGAGAGATCTCCCAC
CTGCTGGTCATTCCCTAAATGGCTGCAACGGCCAACTGAGCCAAACCCAACCCAGGAGCT
TCTTCCGGGTCTCCTAACATGGGTGCAAGGGCCCACTTGGGACCGTCTTCTGTTCCTTTG
CTAGGCACAATGCCAAGGAACTCCACCAGAAGTGGAGTTGCCAGGACTTGAACAGGCCCA
AACATGGAATGCTGGCATCACAGGCGGCAGCTTTATGCACTATAGCACAATCCTGGCTCC
TCAATTCTCTCTCTTTTTTTTAAAGATTTATTTATTTGATTACAAAGTCAGATATACAGA
GAGGAGGAGAGACAGAGAGGAAGATCTTCCATTCTGACCGATGATTCACTCCCCAAGTGA
CCACAACGGCCGGTGCTGCGCCAGTCTGAAGCCAGAGGCCAGGAACTTCCTCCAGGTCTC
CCATGTGGGTGCAGGGTCCCAGGGTTTTGGGCCGTCGTCGACTGCTTTCCCAGGCCACAA
GCAGGGAGCTGGATGGGAAGTGGAGCTGCCGGGATTAGAACAGGCGCCCATATGGGATCC
CGATGCGTTCAAGGTGAGGACTTTAGCTGCTAGGCCACGCCGCTGGGCCCTAATATTTTA
ATTATATAAGGTAACTTACAAAATGTGGGGAAAATGAAATTAATAATATATTTTGGTGCA
GAAAAAATTAAATCTATGTGTTTTTTCATAATATGCATTTCTGTGAGTATTGTGAAGACC
TCCTATTTTGGTGATGTCAAAAAATTCTGCACACACACTCAAACAAATTTTGCACAAAAA
TAAGCTCACCTTTTAGCTCCACTTTCACTTAACAAACTTATGGAAATATTCTTGTGTTAA
TGTAGACACCAAATAAAAATGTCTTTGCCTAGTGCGATGGCCTAGTGGCTAAATCCTTGC
CTTGCATGTGCCAGGATTCCACACAGGTACCGGTTTGTGTGTCCCAACTGCTCCAGTTCC
CATCCAGCTCCCTGCTTGTG
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