SelenoDB
Release 2.0
Chart Advanced
Promoter Report for SPR00001833_2.0
Identity
PromoterSelenoprotein R (SelR)
SpeciesOchotona princeps (Pika)
Promoter IDSPR00001833
Promoter release2.0
External IDNone
Transcript SPT00001768_2.0
Annotation
Prediction method(s)
Promoter prediction (5000bp upstream, N/A) [Report annotation error]
OrientationForward
Structure gene structure

FeatureCol PromoterCol Coding exonCol Non coding exon (UTR)Col IntronCol SECIS
ResidueCol SecCol Cys or Other

Toolbox
Sequence
>SPR00001833_2.0 # Promoter # Selenoprotein R  (SelR) # Pika (Ochotona princeps) Full length # Forward
TGGGACTTCCATGTGGGCTGGTGCATCATTCTGACCCAAAAATATGTTCAGATCTCTCCC
CTCCAAACCTAGAGATCTCAGTCCCTTTGCTTACGTGCAGGTACAGTGGCCCTGTGATTG
GATGTTCCTCAGGATTCATTCCTCGCTTACATGTCCTGTGGCCTTATCAATGGATGTCCC
TAGGCAGTTAATTACATGCCCCAAAACCCCAGAGCTCGCCAATGATTAGCCAGTGGGCAG
AGCCCAATGCTGACTTCATGGGGAGCTAGGATCCCAACCAGGAAGCCTGGGTCAGCAGGG
GTACCCACAGGTGCAACCATGTGGCTGGGGTACCCAGACACCCCTGCCCTGCTGCTGCTC
ACTTACCTGGACTCCGCCCACCAACATGGCAGCGGTGGGCAGAGCCATGGTCCTGGGCAT
GCCCAGAGCTGTCTGAGATCTGTCACCAGCATGGTCGCTGCGGATGGAGGAAATTCTCGG
ACTTTGGGCCTGGACAAGCCCAGGATCCTCCCCCTGCCTAGCAGCACTGCATTGGGAGCT
AAGATCCTCACTAGGAAGCCTGGGCTGGTACGGGTACCCCCAGGCACAGCCACATAGCTG
GGGGACCCAGATACCCATGCCATGCTGCTGCTCAGACTTGACTTGACTCCCTCATAGAGT
TTTATTATGTGAAATAGCTAATAAGGTAAATTGTTCAGGGAAGTTGACAGATTTCAACTG
CAGAGAAACTAAAAGAAAAAAAAAATTCAAAATGTGGCCCCGGAGTTACAGGTAGCTTAT
TGAGATTTCTGAGTCTTATTTTAGAATGAACAGGATGTATAGGAAGTTGAAGGTGTATAA
AAATCTTTGTTATATTAAAATAGGTGAATGAAGGCCTCGTTTTCTAGACATAGTGTGGAT
AGAATTGACTTCAGCTTGTTTCTAGTCTTGCTAACTTTAATAACTAGTTTTAACTTTTGA
GAGGAAGGGAAAAGAGGTTGAGCTAGAAAGCTGGAAAGGTTTTCCTCAGGTGTCAATAGA
AAACAACTTGTGGAAGATTATGTTACTCTTAAATTATGTATTCAGGTTGAGTCAGAGCAG
CTTTATTAAGCTACATTTGGAAAGGATATTATTTTTATCACAATCTAAAAAACTCTGCTG
TAGCATAGAAGGTTGCAAGCAGCAAGGAACTGGCACGAGCTATCTGTGTCACTGGTCTTC
TGTTAGAGGGAGAAATAAGCATATTATGAATTCATTTCACCATTTGCAAGAAGTATTAAA
TTATAGCTACAAATATGGTGTGTTGATTACATAAAGTGAAAGCAGAGCTACCATATTACA
ACTTGTTTTTAGTTGTACTACCTGAATTTATTTGCTATATGGAGAAGAACATTCTTTGAG
GAGAGAAACTTTATTGAAAGTAAGACATTCTTGATAATGATAGGTTAATATCTAGCAAGC
TCAGTTTCTGTTCTTTTGCATGAAATGATAAGAAGCCGAGATTCAACTTGATCAAATAAA
AACAAAGGGATATGTTGGGGGAGGGGGGTGGAAGAGACAACTCTGTTTATACAGGTTTTC
ACATGACTTTTATTTTTTAAAAAAGTGCATGGAATGCATCCAAAACAAACACTGTTTTGT
TAGATGAGAAGACCAAAAGGAAAATTCTAGAGAAAGGAGGATGGATGGTCTTTCTTTAAT
GTCAGAACTGACATAAACACACTCTCCTGCCCCCACCATTTTGCTCAAGATAATTTTCTC
TACAAGACGCAGATTGCTTCAGTCTTTCCCTATCACCCTTTGAAGCACTTTCCTTATTAT
TAGGAGTGGGGGCAGGGTTTCCTTTGAGGATTTTTACAGCATTGAAGAGTTCCTCCGTTA
AATACTTTCACATGAAGAGGGAATTCCACTTTCAGAGTGCTGTCATCACTGTGGCTTGTT
TGCTGTAAGACAGTTTACTCATGGATGATGGTCCTTCCTTGGTTTGTCCTTAAGGACTTA
CCTTTTTGATGCATTTTCTTTGGATAGAGCTTCTCTTTTTCTTAGAGACCTAGCACTGCA
GCTCAGCATTGCCCTTTGTTACCCTTCCTGGCAAAGTTAGCCATGATTCTCTAGTGAAAT
GTGCTGCGTCACACAGGACCACAGTCTCCATCAGGCTTTCTCCCATCAGTCTCCACTAAT
TAAGAATTGGGTGGCATGCTGATACTCTGTTTTGAAAACTGCGTTTCTTCCACAGTGCAT
AGGACTGGGAGTTTTTGAAATATCCTTCTACTTGCCTCTTCTACTGTTTTCTGTAATGCT
ATCATAAAAAAAAAAACCAGCAAAAAACAAACCATTCAACTATCAACAGTCATCCAGAAA
CATCAAAATTTTTTGAGAACCTCTACTGATTTTGCTCTAGCTGGCTCAGTATTATTCTTA
GAGTTTTTCTAAAAATTCTGTAAATATTTAATTCAGTTAGGCAAAGTGTTCAGTTGAAGT
TGACAGCTTGTTTGAAAGCAATTCCTTTGCCCCAAATCTTTAGTAGGGAGTGTTTCAGAG
TTGTTAGGAAAGAATTAGAATTAAAAAACCCCAAATATAATCCACAGTTTCTTGTTATCT
ACAGATGAGTTTCTGTGTCTTTGTAGCTATTTCAAATATATGAATAAGTAATTATGTCTC
AAATTAAACTCTATCATTTACATCACAGCTCCTGTATTTTCTCTTTGAACAGCTTAGTGG
TTATGAGATGAGAGAATCCATATTGCCTAGTATACACTCATTATTTGCTTTCACCCAGAG
ATCCTTAAATGCAACAGTTCAACAATCAGCTAACCCAGACAAGACAGTAAAGATATTTCT
TAAAACCTTCATTCTGCTGACTGCGAGTGTTCCAAAGACTTGTGAGCCTTTTATTGAAGA
AGAAAGTGGAAATCAGAAGAGAACCATAGACCAAAACCAATGCTCACATTCTAGATTCGG
CTCTGCTGTATCCTGCCTGTGTAACCTCAGCAAGTAATTTATCCTTTGGCCTACTTCTTC
AAAAAAGGAACTCTGAAATGAGTGACCCAGATAATCTTCCTGTTTCTACCATGGTATAGA
CATGAAAAGGGTGTTTCTCTGCCTCTAGAAAAAGGTTTTGTTACAAAGGTTGAGCCAAGT
GGGAAACTGCAATGAGAAATGAGCATGGTTATATCTTAGTTTGGAAAAAAGTATTATTTC
TCATGTGACTCTGTGACATAATTATGTATCCCTTGGACTTATCAAAGACTAACTGGAGGT
CAATTTAATAAACATTTGAACTGTATTTTTGTGCTGGAGACCATGATAGCAAGAATACTT
GGGCCTATACGTTTAGACTCTACCTTGAAGTTACTCAATACCTAGTTATGAAGGAAGCAT
GAAAATAAGTAAATCACAAACAGTATAATAAATAGAATGAAACAGATACACATATAAGGT
GCAGAGGTATCATAGAAGAAAAGTACATATATATATACATACATATATTTCCATGTATTT
TGAGTTATAGAAATAGGAAAATGCATATGTGTCACAGGAGGTAGTAAATTTACAACAAAG
ACAATAACAAAGCTACTAAATCTCTTCACCTGTTTGCTATTGAATCAGGTATGTTGCCTC
ATAATTTTAATTGCCTTAAATAATCAAGTAAATTCTGCCATAGACAAGTTGAAAATAATG
TTTCTTTCTTTTCACAGATTAATGTCTCTGTTTTCAGTGTCCTTAACTATGAGCATTGAA
CCTGGCTTCACTAGCCATGATAGTTTCTGTGACTGAATAAAATACAACCTAATATGTCAA
GTCCTCGATATAAACTGAGTACTATAGTCTAGAGTATATTTAAGTTATCTTTAGAACTTA
GAAAATAAGAAGAAATGAGTTTTCTTAAAAATGCTAGTAGTCTCAGCATGATTAATTTTT
GTGAGATGTTATAGTCCAAAAGGTTATAGCTTTCCTAGTGATTTGTAGCAATCCTAAGCT
GCCATCAAGGGATTGGAAAGTATTTAAGCTCCTGGTATTAAATCTAGCAATGACCATGAA
AGCTGTGCCCTTGTCTAGGTTGAGCATTGGGAGAACCTGGAGGAGTTTCCTACAGAAACT
TGGCCTGATCTAATTTGTTTTGTCTGAAGTTGGAAATTACATTATTGAAAATTTTTCTGT
TTTGTTTTGATGGGTGCATTCACACAAAACACAGAATTTCTAAAAATGTTTCTCTTTTCT
TAAGGAATAAATTTGGCAATTCAGCAACCTTGTACTTGTTCCATCATTTGGGGGGATTCA
AATTCTGTTCAGTAACTCCCANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNCAACAGGGTACCGCATTGTTAATATTCAATCACCTAAACTAAGTAGTAAA
AGAGCTTTTCCTCCAAAGAGTATGAAATAGTGAAAATTTAACAGATCACTTGATTGTAAT
TAAGCATAATATGGAGGAGTCATAGTTCCAAGAGATTACATAGATAGGAACAGTGAGAGC
ACGCATTCTATTTGGGGGGATTCTCTAGAACACCACTGGGAAATCTAAGAATGTTTTTGA
ATCACAAAACCTCAATGCAATTATAATTATTATCTGAACATTACAGAGTATTATTTCTAA
AAGATAACTGTATTCTTGCAAACTATGTTATCGTTCAGCTTTTGTCAACCTCTCTTTTCA
GGATGAAAAATTAAACATGAGTCATAGAAATGATCTCCACCATTTCCATTTGCTTAGCTG
TTTTTTTTTTTTTTTAATCATATTCTCACCCAAGACCAATCTCTGTTCTCTCTTGTGATT
GTTGCGCCTGCTGTGCTCCA
Chart Advanced