SelenoDB
Release 2.0
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Promoter Report for SPR00002029_2.0
Identity
PromoterSECIS binding protein 2 (SBP2)
SpeciesOryzias latipes (Medaka)
Promoter IDSPR00002029
Promoter release2.0
External IDNone
Transcript SPT00001964_2.0
Annotation
Prediction method(s)
Promoter prediction (5000bp upstream, N/A) [Report annotation error]
OrientationReverse
Structure gene structure

FeatureCol PromoterCol Coding exonCol Non coding exon (UTR)Col IntronCol SECIS
ResidueCol SecCol Cys or Other

ToolboxForward   Reverse    
Sequence
>SPR00002029_2.0 # Promoter # SECIS binding protein 2 (SBP2) # Medaka (Oryzias latipes) Full length # Reverse
GCGCCCCCCGTGGTCGTGGCTGCTCCTCTGCGCCGGCCTGCGCTCACCGCCGCTTCTTCA
TCGGCGTGTTTGCCCTCAGCCGCCCCTCAGCCGGCGGCAAAGACGGCCCAGAAGGTTGAA
CCCAATTCACCTGAAAGTTTAGATCCAGTGAAGCTCACCTGACTTTTATTATTTTAAAAT
TTTCAGCCCAACAAGCGTAAACTGAAGCAGCAAAGCGAAGCGTCCAAAGAGAAAGTCCCG
CACAACGTTCGCCAGCGCTACGTCAACATGTTCACCGAGGAGTTCCTCAAGTCCACGAAG
GACGTTAACGAAGCCTTTCAGAAGGTGAGCCTGCGACGTCTGCTCTCTACAGAGGCCAGC
ATCTGAACCCGCTCTGGTGTGAACAGGCCCTGAGCGAAGAAAAGAGCGTCTTCAACCGCA
GCGCAAACAAACTCAAGTACCTGAGTGTCGCTGTGAACGCCCTGAAGAGGCTGAAGAACC
AAAGCGCCGCTGCTCCCAAGAGTGAGATCCTCCAAAATCTGAGTTTCCTCCACGTCTGAG
AATGTCAGATGACTGTCATGTTTCTGTGCTGCAGACGAGACAGAAGTCATCACCCAGAGA
TCTAAAGGAAACATCCCACTGAGCCCCAAGAAGTTCAGAGGAAAAGGTGGAGGTCACTTT
GATGAATGGGCCGGCCGCTGCTCAGTTCTCTGACTCTTGTCTTTCAGCAGATGACACGGC
TTTCTATGAAAGTCTGAAGGATTATATTCTGAGTGATGACAGAATGATAGAGAATAATTA
TCCCGTCCAGCACCCGGAGAAGCGGGGATGTGCGGCCCTTTTTAACGAAAAGAAGCCAAA
CCCAGACCGTAAGTGGAGATTTCCCACCCGATGGTCACTGCTGTTCTCCTGTTTTACCAC
TAGGGGGCAGACTTAGCCGCCTGATGTGCAAAGGAGCCTCAGCTTTCCCTCTTGATGCTT
CCAGCCCTGAAACGGATCTGCTGTCGATGTGGATCCACGTACTCCGTGAGCCAATCGGGC
AAACACGTCCGCAAGGAGGAGTGCAACTACCACTACGGCAAAGGGGTCAAAAACAAAGGT
CAGAGGGCAATCTGCATCCACCTGCACCTCACGTGTACACGTTTGCCTTTTAGATCAGAC
GTGTTTATGAACGTGCTGACTCTGTTCTGAATTGCAGTGCCGGGTGGAGTGGAGACCCGC
TACAGCTGCTGTCAGGGCGTCATGGGAGCTCCGGCGTGTCAGCTGTTCAAGGTGGAGGTC
CACTGTTGAAATGCGCTGACCCGCTTTAGAAAAATCTCTTACAGAGTGCTTCTCCCCTTG
ACCAGCTGCACGTCCACGATTCCCTGAGCCTGGAAGGGTTTGTGTCCACGGCAGCCAGGA
GCCCGTCGGATGCGGCGTGTCCTGGGGTTTATGCTCTGGATTGTGAAATGGTATTTTCAT
TCATTCCTGAATCTCTCACTGCTTACAGTGGATTCCTTGAAACACCTGAAGGTTCCCGGT
TAGGTTTGGACGGGAAAAGCTGTTGGTGAAATGCGGAGAACTGATTTTGCCGTCAGTGAG
ACTTGAACACTGTAAGCTCCGTTTACGGGTGGATCTTTATTCCAATGCTGGTCTGTGGTC
ATGAGCCGGTGAACCAGGAGAATCCAAGCGGACATTTTTTTTCCAAGATGCATACGCAAA
TTTTCTGTCTTTCCATGCATGTCTTACAGACATTTCACGTATGTACCAGGAATGTATAAC
TTTTATATCACGTACACGGCACACGTATCATGTTAATATGACATGATTGACACACAAATC
ATAAATATTTTGCATATAAACGGCGAAATAATCCCGCACGGTTCATGTTCTACGATGATT
TATGTGGTTGATATGAACTTTTTCCGTGTTTTTTTTGGGATCATCTGTGAAAATTTCACA
TGAGACCACAACTTTTCTCGCTCTTTCCAGGTATGACCCAACGTCATCCCTGCTCTATGC
ACAAAATGACGTAGTGGCCGTGTGACGCAGGCTTTAGAGATAGGGGGAGGAGCTTGGTCA
CTCGGAGTAGAGCTGCTGCTCTTCCACATCCAGAGGAGCCAGCTGAGGGGGCTCGTATGG
GGGAGGTGTTCGGTATGTCCCACTGGGCGGAGGCCCTGGGGAAGGCCCAGGACACGCTGG
ACGGGCCTGGAATTGTCTTGGTAGTCCCCCAAGTGGAGTTGGAGGAAGTGTACGGGGAAA
AGAGTTTGACTACCCTACGATCCGCTGATGGATGGATGGAGCTTCATTTGTTCAAACTTT
AATCCTCTATGTATTGAAAAGGTTCCGCTCTGTCAATGTCGTCTTCAGTGTTACACCGTC
CGCGGCCTGGAGCTGTCCAGAGTCACCGTGATCAACTCGGACCTCCAAGTGGTCTACGAC
GCCTTCGTCAAACCCGACAGCGAGGTCATCGACTATAACACCAGGTAACTGCCTTCCCTC
CGAGTGTCGGCTGGTCTTCCTGTTGCTTTGATCGGTTGTGGACTCGCGCAGGTTTTCGGG
TATCTGTGAGAAGGACGTGGCGGGGAGCAGCGCCTCACTGGAGGAAGTTCAGCAAACTCT
GTTGAGCTTCATCAACGCAGACACCATTCTCATTGGACACGGCCTGGAAACAGACCTCTG
TTTGCTGAAGGTGACCAGATATACACCTTTAGAGAACGTTTGGCCAAAATGTTTGTTCTG
TTTTGTCTTTGTATAAAACAGAGTCTGAAAGTACACAAAGATGCTGCTTTTAGTGAAATA
ATTTGTCTTTGACTTTCAACCATCCTTTTCAGGTTTTTTTATGCTAATAAATGCAGTTTT
ACCACAGAATTAAGTGGAAACTAAGAGCATAAAAGGAAGGTATTTAAGGCGCATTGATCA
TCTTAAGGTTTTCTTTTTCTTGTTTTCAGGCTTGTGGTTTTACAAAAATAAGAGTCATGA
AAATGTACTTTTGAGTTTTTATTGCTTTTAAGTTAAACATTTATAACTAATATGAAAACT
CAAATACACATGGTACAAATATATTTTCTCCCATGATGCAATGCGACTGATCAGTTTCCG
ATCATCCTGTAGAAATGAAAGCAGTTTGAGGAGTTTTTATTGTGCTCTAGCTGCTTCACG
GGAAGGTCGTGGACACGTCGGTGGTCTTCCCCCACCGCCTGGGCCCCCCCCACAGGCTCA
GCCTCAAACACCTGACGGCCGAACACCTCCGGAGGATCATCCAGGAAAGCGGTGGGTGTG
CAGCGTGGGAGGGTCCGCTGCCCACGGGGGGGACGTTCCCGAGCTTCTTTTCGTCGTTCC
GTTGAATAAAGACATTTGTCCTTTTTAAAAATACATTTGGAAGAGCTGAACAGGTGAGAC
TCAATGTTTGCCGTTTCTCCCAGTTTGTGGCCACGACACTGCAGAGGATGCAGCTGCCTG
CATGGAGCTGATGCTGTGGAGGGTCAAGGAAGACGGAAAAATGAAAAGATGAAGCTCTCA
CTGCCAGATTCAGATTTAAATATGGAGTTTTGTTTTAAGTTCTGTCACTTATTTAGTTAA
ATGTGTCTTTTTTTGTATGCAGAGGGATTTGAGGCTTATCTTTCTTTTTCAAATATGAGC
TTGTAAAGTGGTGGGTTGACAATTATTTTTCAACTAAAAGCAAAAAAAATCTGTCTGGTT
TTTTTTTGTTTCCAAATCGTCCATCAGCCAATGAGGCTTCAGCCTCTGATGCCAGATGGA
CCTCAGGTGTGGTAAATGAGATGCAGGTGGACAAACCTGCTCAAAGTTGTAGTGATTACA
GACACCCCCCCCCCCCACACTTAAAATCCCAGTCTGTTTACTGAACCGTGAGTTTTCTAT
CCCCGTCTCGGCTGAATCCTCACTCCGCCTTCGTCTTGACTGCTTTGCTGCCACAGCATC
TCCTGAAACAGAACCTGCAGGTCCCGATGAAGAGGAAGATGAGGAAGAGGTCCAAGCAGA
GGAAGGCCACCAGGACGTCCAGGCTGTGGTACTGGTACCAGGTGAGCTTGTGGGAGTGGA
CCCGTAAATGCTTGGCTCCCTTGTTTCTCATGGTGAACTCGATCCAGAACACGGCCTCGT
CCCGGGCGCTCATGGGTCTGTCGTGATGGATCCCGGACAGCCGCATCGCGTTTTCTTTAT
AGCTGTGGATGAGAAGGGGGGGGCGAAATGTGTTTGTGCTCTTCAGCTTCACAAAGGATG
AGGAAAACCCCTTCAACCTGCAGTCAGAAGATCTGCGTCTTTGTGAGATCGTCTTAGGTT
TGACCCCCCGAGACAGAAAAGGTGTTCCACGTGTCGATGTACTTACGATTTATCGTTGAC
GACGGTGTTGATGGCGTCCCTGAAGTCCTCGCTGGTCATGAAGTTCAGGTTGAGGATCAC
TGCAGCTCCTTTTGCCTTCATGTGGTTCATGTTGTCCGGCTGGTCAGCAAACATGGGGAT
GCCCACCATGGGAACGCCGTGGTAGATGGCCTCATAGAGGCCGTTGGTGCCACCGTGGGT
GATGAAGGCTCTCGTCTTTGGATGACCTGTTGAGGGCCAAGATTTTTCAAGTAGGAGTGA
AACGATTTATCGACCCATTACTACAATCCAACCAGATAGATCTGTCATCAAATTGACCTA
AACCGTTATAAAATCGTTTCAAAATGGGATACATCCGATATTCAACGTCGGAAAATCCCG
TTTGAATAGAGACGGGGTATTTACTATTGTGTAAAATCGACCAAGACAACATCTGAGTCC
CTCTGAAATTTTGGCTCAAGATGTCCCAAGTGCGTTTCAGGTCAGTGAATCGGATCGTTC
AAGATGAACCAAAATCGACAAGGAATCGTATCGTCAATCCCAAATTAGGATATGATTCGA
ATCGTTAAAATTCATTGTTACAACACCTAATTCAAGCAAGTTTTAACTCTGTCCCTGCAT
TTCCTCACAGGTGTAGTAGTTGCTCCACTCTGAGCCTTAGTCCCAACAGTTTTAATGGGT
GAACCTAGGCTGTCTGCTGA
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