SelenoDB
Release 2.0
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Promoter Report for SPR00002043_2.0
Identity
PromoterSelenoprotein O (SelO)
SpeciesOryzias latipes (Medaka)
Promoter IDSPR00002043
Promoter release2.0
External IDNone
Transcript SPT00001978_2.0
Annotation
Prediction method(s)
Promoter prediction (5000bp upstream, N/A) [Report annotation error]
OrientationReverse
Structure gene structure

FeatureCol PromoterCol Coding exonCol Non coding exon (UTR)Col IntronCol SECIS
ResidueCol SecCol Cys or Other

ToolboxForward   Reverse    
Sequence
>SPR00002043_2.0 # Promoter # Selenoprotein O (SelO) # Medaka (Oryzias latipes) Full length # Reverse
TCCAAACCAGGCCATGAGCGCGCGCGAGCTCCGCGAGGCGAAGTTAACGCTATTTAATCT
GTGATCGGCCTTTGTCACTGTTTCTACATAACACCGGATGTTTGTTAGACAGTCTTGTGC
CACACCGAAATCCATCCGACTGGAAACAACTAAACGGACAATTTTAACCAATGAAAATCG
CTAGAGGAGACACGCCCGCTTGGGAAGCCTGGCCGACGGAACGCGACGCCATCTTGGTGA
GGTCGTCGGTGCCCACATGACAATAATGCTTTCTACAGCCCTTGGTAGCAACTAAGTAGC
TTTTATTTAATTTATAATTATATAAAATTATATATTGGAATTTATAATATGTGTGTGTGT
GTGTGTGTGTGTGTGTGTATATATATATATATATATATCTCTCTCTCTTACATNNNNNNN
NNNATATTTGTGTGTGTGTGTGTGTGTGTGTGTGTGTATATATATATATATATAAACCTC
TTTGACATGTAATTTAAATTATTTAGAAAAGCCCAACGATGAGTAAGTAACAAGTTAGTA
ATAATAAATCAATAATAAGTCAATAAATAATATTAAATCAATAATAAGTCAACAATAATC
CAAAAGTCAACAATAGATTTACCCTAAAAAAACGAAGAAAAACAATAGATTTACTGATTC
ATGTGAGTGATCAATTTGGTGTAACACAGATGGTTTGGTGTCGGGTTCCAAGCCAACAGT
CTGGCGTCTTATCAAAATCTGTTTCCCAAATGTTTTGAACATATCCAGACTGTATTATTA
GTTGGTACCACAGTGATCCATCTGGGTTGGCTCTTTTTATTGCTCCACTTTTTCCTGAAG
TCTGAATCCATTGGAAACCTGCAAGAAAAGTTCAGTCACTGAGTCAGAAATGTATAAATC
TGTATTACTATAATAACCTAGTCCTAGTATACTGTCCATAGGTTTAACACAATAAAGTTT
ACATTTATGTCGACAGCAAATTCTCCGTACATCATGCAGCATTCTGATAATAGCCCTGCA
ACATCATGCATGTCAACATGTGTATGATTAATGAAGCCCGTGCAAGATTAAAAGAAAAGA
ATTATAGTACCTACCTGTGAAATGATATGCCTTCCTCCTTCATGGACTCATTTCTCCGAT
TTTGGCAGTTAAAACCCGCACAATGAACTGGCATTATGCAAAAAATGTGTTCACATGCTG
CACTGCAGCAGTAACTTGACCTCACCAAAATGGCGGTGCTCTCCTCCCATGAGGAACCAC
GTGATGTCTCCTCTACCGATAGAACTAATTGATTTTGACCGACGATTAAAAAAAAGGATT
AAAAATAAGAAAATACTTTGATGTAAAACTAAACAAACAAAAAAAAATCTGAAAAATGTG
TCAACACCACAAGACATCTAAGACGAAAGATTTACAAAATCATTCAAGTGATTTGTTCAA
AAAGAAAGTAGGTGCAAACATAATATATTTACTAAAGATAAAAACAACAGGACCTTCTTG
CGGTTCTGTCAAAAATAAGTAAAAATTGTGAAACAGAAAAATATAACACTGGTATAAGTT
ATCCTTTGATTATTGATTATTAGAAGCTACTGTTGATATTTGAATGGCCACAAAAATATA
GTTTCTTTTGTTAAACCATGAAATGGGAGTTTGTGGCCCTCACTGGGTTTTGTCTGGACA
AAACTGGACCAAATCTTAGTTTTAACCCTTGTGCTATCTTAGATGACCCCCCCTTCCATT
GAGGTGTTCTTCCTACCATGACAAAGGTGGATAAAGGTGGAAAGATTTCATGTAATCCAT
GGACACCAGTGAAGATCACAAATCATTGAAGAAAAAAGGTTCAGAGCACTGTCTAGTGGG
TCTAGATGACCCAACTCCCAATGGTAAAGTGCCTAGGATAGAACAAGGGTTAAACGTTGC
AAACCTGTGATGTTTTAAGACAAACATATGAGATAGGATGAAGGATTCAAAGGGACTGAA
GTACCTTTTATTAATGCATCTAGAGTATAAATCTCTGTACAGAAATCACATATAAAGCAG
GCATGAAAATGATCTAAAAACTGCCTGAAGCTGTCGTCTGTAGACACTCAGGTTATTTCA
GGGAAACAGTCATGCAGCAGGATGCCGTCCTACAGATGCAGCTCCATTTTGTTCAAAAGC
TTCAGAAGAAAAAAGGCATCGGTGACGTCTGTAAGGCTTCGTGTCTCATGCTCCAAAGGT
TTCCTTTGCACAAGAACATGCACATCCCGTTTAAGTTAGAGAAAAAGCAGATATATGTTG
TAGTTCTGATCTGGTTTCATTCAAAAAACAGTATTTAAAGCACACTAACAGTCGCTGCAG
CTCTCTGGCTGTTCATGAAAACATTCGTCCCTGTAAACAAATGAAGTATAAATTATAATC
TGACCGTGTGAGTTAATGCTGTGGGTTGAATCGCAGACAGAAACCAGAGGATTCAGTATT
TATTGTGGTCCTGAGGTCCAGCCGGCATCAGTTCAAATACAAGAATGCACAAAGACGGAG
GGGTCTGCTGTAAAACAGTCCAGTCGGCACAATTAGTGTCTTTTTGAACAGCAGCAAACG
GCCTCGGCGTGTTTCTATCACAGTCGGTGAGGCTTTTGTGTTGAACTGAAGCCCTTCCAG
CTGCAGCAGCATCAGGCACTTGGCTGTCAGCAGAGCAGGAAGATCGGACCGGATCTAGAA
TGAGATGCTCATTCTTGTGTTTTGCGTGCTGCTGCTGACCTTTACCTCCATCTTACGGGC
CGCTGTGCTCCTGCTCACACGGTTTGGATTGATTTCATCGACATGCAGTCGTTTTCATGT
TTGAACGCTCAGAAAAGAACTACGCTTTCTAGGAAAAGAGCCCGGCTGAAGAAGACAAAC
TACCACAGTGTGGTGGAGGAAGAACGCAGGCTAAGAGAAGAGCGCCATCACCTCAGGGGG
GAAATGAAGACAGATTTTCTTCTGATTGGGACTATTAATCTAGGAAAAAGCAGGATAAAG
TACTGGTGTGGTTTCTTTGGCAGCATGTTCCCCTCTGTTTCTACAAAAACATCAGGATGA
AGAGAAAAGGGGCTCTGGGACGTCCTCGATCACTTCAGAGACGTCGGAAACGGAATCCAG
CCTCGCCTGGAGTTTTTAAGGCCACTGGTGATAAATGCATCATTTAAATAGATCAAGTGT
CATGTCAGGGAAGGGAGGGGGGGCTCAAGCAGGGGGTGGACGCAGTGTGTCCATCAAAGA
CTGAACTCCAGGTAAAGACAACAGGCTTCTTCCTAAACTTCCTCCGGCGCGGTAGCAGGC
GTATCCCAGCATTCCCATCACCACGCCGCTGAGGATCGTCCTGAACACCTGGCCGAACCG
TGAGGGGGGGGCCACCCTGGAGAGGCAGAAGGGATGAGCGGCGGTGGCGACTTGAGGCAC
AGCAACCAGTCAGAGGAAACGTACCGCATGATTTCATCGATGTCCAGCTGCTTCTCCCAG
TTTCGTTCGATCCCCGGGACGTGACCCATGCCTACGACCCCCACCACCGTGGCGGGCACC
TCTGCAGGAGCGACAGCAAACGTTGATTTGGTGAACAAACCGAGTCCAAAAAACGAAGCA
AAGATGCAACAAGGTGACTTTTTTAGACGTGTTGCGTTAAGAATGACGGTGCACTAAAAA
ACCACAACGGCGCCGTCACGTCTGCTCAGCTGATTGTGTAACATCAAGAACTATGCATGA
ATACATTGGGCCGCTCAGCACTTCTGTGCAGTGAAGTACACACTCTGGGCGTCATGGGGG
GCCTCCACGCAGCGCGTGGCTTGGCGAAGGCTGTGCGTGAGGTACATGTCCCTTTCAGCC
ACGATGGTCTGATGCAGAGCAGGAAACTCTCCGATCATCTCCGACATGGTCTGCTCCAGC
AGGTCCTTCTGCTTGCACTTCTCCACGTCTTCTTTGCTGAAAGAGATCAGATGAAAGCGT
TTCCCAGCCGTGTCCGGCAGAGGACAAAGCCCCCCCCCCCTGGTCTGTGGATGTGGGGGG
GGTTTGAACCCCAGAACGTCAGAATGAAGGACAGCTGAGCAAAGAACAGCAGAACTAAAG
TCGGAACATTTCAGAGGTTTAAACTGGATTTCTGGTTCGGAAACTTTACATTCTGACGTT
CATAAAGACCTGAAGAAGTTTAGCTCTTTAACTCTGGAGCTTTCCAGACCCCAACTCTTG
AAAAGCAGCTTTGTGCTGATCTGCAACACTTACAATTCTACGTTCTGTTGTTTGTTTCTT
TTTACAGAAAACAGTGGAAGAAAATATCAAGTTTGCTTTGGGATGAACTTGATTAACAAA
GGGAGGAGATGACTGCAAAGATGAACTCCCCAAACTCTCTTCTCCTCCTCCATCCTGATT
TCAGCTGATCTGATCAAACCTTTCAAAGGCCAAACATGTAAAACTACAAACTGAGGATTT
TGGCTCCACATGTAAAATGTTTGAGACCCCAACAATTTTCTTCAAGGCTTTTAGAATCAA
ACAAATTTGGTTTTTGTTTGTTCATTTTGAGAAACGGTAATTGACAGCAGCCAAAAAAAC
AAACATAAAAAAAACAAAATTATAATAAAAATTCTGTTAAATGAAACAAATTAAACAACA
AAAACCAAAGGCCAAATTTGACCCGGGGGCTCTCCACGGTTCAGAACCACGTTGGCCGTT
TTTTTCTTCAAAATTCAGAGCAAACTAACAATGCGACTTTTTTACCGGTGGAACTGCAAA
CGTGTTCTCACCTGATGGGATCCGACAGGAAACAGAGGCCCCAGGCCAGACGCGCTTTCT
GCCACAGACTCAGAGCGGCGATGGCTCTCTTGAAGGTCACAGGAATCGGTCGATCCCCCA
GGTGAAACTTACAGAACGGCACCTGTCCAGCCTGTCAGGAGAAAACGTATCGTGTGGTAG
CAGAAGTGGGATGTGGATGAAAGCGAGTTCTGGGACTGCCGTACCTCCTTGAAGGCTTCT
CGAAACTCCCCCCCGGGGGC
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