SelenoDB
Release 2.0
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Promoter Report for SPR00002046_2.0
Identity
PromoterSelenoprotein R (SelR)
SpeciesOryzias latipes (Medaka)
Promoter IDSPR00002046
Promoter release2.0
External IDNone
Transcript SPT00001981_2.0
Annotation
Prediction method(s)
Promoter prediction (5000bp upstream, N/A) [Report annotation error]
OrientationReverse
Structure gene structure

FeatureCol PromoterCol Coding exonCol Non coding exon (UTR)Col IntronCol SECIS
ResidueCol SecCol Cys or Other

ToolboxForward   Reverse    
Sequence
>SPR00002046_2.0 # Promoter # Selenoprotein R  (SelR) # Medaka (Oryzias latipes) Full length # Reverse
CTGAGGGGAGCAAAAACCAAAGCCACTCTCTACTCTGGAACCAGGATCTCTATACTTCAC
GTCTCTTCCATGACACTCACCTGGCTGGAAGTGATTCTTATAATATTCTCCACCAGAAAA
GGGGCAATAAGACATTTCCTCCATGTCAGATTCAAGCCAAAAAGTTTGACAATTATGAAT
AATTTTCTGTTACGTATTAAGCAAAGACTAGCAAACAGTAACTCGGCTTGACGTGGAAAA
CGGTAGATCAGTGTCAACAGCTGGTGTAACACCTGATCCTTCTGGCCCAAGGTCCACCTA
GTGGCAGAACTTAGGAACTGTTCTGACTTCAGAAAGCAATGAGTGGCACAAAAAGGTAAG
AAAGTATCCAGATGGAAATGTATTTTAAAATATGTTTATTTTTGAGCATCATTCAGTGAA
AAAAAATGGATCATCAAACTTTTCACATTTCAGTCCTGCTGGATATGTTTTTATATTCAG
GCAGCCACATACAGATAATATGGTCAAATAAGGGATCTGTCACTCAGAACGAGCTCTCAA
AATCCTAAAAGGTTATCTTTACCAGAAGCAGAGGTTTGCTTAATGAGACAAAACTAGTTG
CTACATCATTTGTGATTGCATAGCAAACAAGTGCAAAAAACAGATAGAAGTCCTGTAATC
CTTGCTGTCCAGTGAAGTCAGGATTCATCAGAGCTCTGGTGCTCCCGGACCGGGCTTTGT
CCCAGAACACTTCATTCGCTGTCCACACCTTCAGCGGCACAGGGAAACTTCCAGACCTGC
CGCATTCCTTAATGACAGCTCACTTACTGTCCATCCACCTTATCTGCAGAATGAATTTGA
CAGCAGTTACACAACTTTGAAAACAATAATTTGATGAAACCCCGAAGATCACTAAGAAAA
CACAGACCGGATAAGTACATTTTTGAGAGGTTCTTTCCAGGCATTCAAAGACATTTTCAT
TTCGCTACAGTTTCAGCACTGTAACCAGACTGTACCTTTGGGGATGAACTTCAGTGAACT
GCTGAATATTCAGAAGCGGGACAGCCCTTTGGATGGCCCGTCATTTACAAATTCGTGACC
CAGTCCGTTTCCACATTTCCCGCAGCGCACCTAGAACAAGACAACAGACGTTTGCTGCTA
ATACAAGTCAATCAGAAGGTACTTCCAGTTTAAATGGTGTTCCTAAATGTCAAAATACAC
ATAACCTCATAACCAACAAGGAGCTTAAATAGATGTTTTTAAAGGCACCTTGTATGCGCC
TGGTCTTTCCTCGTGTTTGGAAATGCTGTCATCGTGGATGGTCTCGGTAAAAGCTGGCCA
TGGGGACGAGTGCTCGTACTTGGAGCGGCTGGAGAACAGTTGATGTTCACACTTGGAGCA
CACATAGATCCCTAAGAGAAAGAGATGGTTCAGCATAGAACAACAAGAGGTACAGTGGTG
GACGTTTTGGAATGAAACACGTGAATAATAGGGAGCATTATTGGTTTATAATGCAACACA
TTTAGTAAAAGATCTGCAGTTATCCCAGCTGGACTTTGGTGAAAGCTAAGAAAAAGAGGA
GCAACAGAGCACTCCCCACCTCTAAGAAACATCAAGACCCCCAACAAGATGGTCACTAAA
ATGAAAACAAAGCCTTTGAATTTTGCATCTGCTCACATAACATGCAGTTCATTCACTTTG
AAGAATCCACTTATATGAGCAGAGAAACATTGAGTTAGCCTGAAGAACATGATATTGTTA
AGATAAACCTGGTCATTTGTTTTTGTGCATAATTTCACAAGGTTTAATTCCATTCTGTTC
GATTTGTTGCTACACTTGTTGAACTGAGTGTTTACTTCTCCATTGTGTAAACTCGTGCGT
TTTATAACGTTTCTGTTTGGTAACCTGACCCCCACTGTTACAAAATTATCTCGCTTGTAC
CTTTAAGGGCGTTTGGATCAAAAAAATAAAAATTCGATGTTGTCAAACTTACTATTACTC
CGTGTTGAGGTTTTTTGGTCCCAAAATAGGTTAAGAAAAGTCTACTCTGTACGTACTTAA
ATTTAAGTTAAGTACGTGACTAAAAACACAGTTGCTAGATTGCCCATTAATAACAAAAAC
AAAACGTTTTCGGTTTACTTTGTGAAAAAGTTAAATTACCTGGTTTAAAGTGGTCTTTAA
AGACCTCTCCACCGAAGAAAGAACAGAACGACATTGCTTCAACGGGTCTTCGGTGTTAAT
CTGCCTTCAATCCACGACAGAACAAAACATCCGGCCGGCAAAACACTACTTCCTGTTTGT
TTGGCATGCCTTCAAAATAAAGGTTGTGGCGTTACTTGTGCGTTTCACAGGGTGACTTCT
GTTTGGTCAATAAAGTTTTATCGAATGCAATACGCTTCCATGGTAAAACACGCCAGCCTT
ACAAACAAGAAAAGTTTCAATTGAAACTCTATTATTAATTAGAACGAAATAGTTCATTTC
ATCCTTCCATGTATATATGTTCCATATTTTGTCTTTTTTATATTAAGATCTTTTTTTCAT
TTACTAATGCCTTCATTTTGTATTATTACGAAAAAAATAATACGAAAAAAAAAAGGAAAC
TGGGAACCAGTTTCCTTTTTTTTTCCTTTTATTTATAATATAAATCTAAAGTCTTCTTTC
TTATTTGAAAGATTAGGTCTTCATGTTTTGATTGGACGTTTAATTTTAAAGAACCTTTGG
ATCTGAAATTGAAGTTATGCTTAATCGTGAGCAACCACAGAAGAACAAACAGCACCTCAG
CCCCGTATTTATTTATTTATTAGAAAAAAAGAAAGAAAAAGAAGGAAATGCCCGTTTCCG
CTTTTCCAGCAGGGGGCGGTGGGTAGCACCTAGTACGCTACTTTCCCGGTGAGCAAATAT
AGCCTACCAATTCATCCAGTAATCCCTATAGCATTTGAAAGTAAACCAGCTTCCTCAAAT
GCAATCTGGAGCCAGTATTTTGGATATAAAGTGATTTTTTAATTTAAAATTATTATTACC
ATTACTTCCATTAATCAAACGTGATCACGATGAGAACTGTTAGATTATTGTGGGATCAAA
TAATCATTAAATTAATTTGGCATCAGCTAAATTATAACAATTACATTTCATATGAAATAT
GAAATATCTTTTTTTAAGTCAACATTTTTTAAAGGGCATAGTTTTCCTCTGACAGGAGTT
CCTGCAGGACGTGTAATTACATAAACCTGCACGCATGCACTGCGGTGCTGGAGAGTTCAT
CCCAGTCGTCTGTTTTCATGCAGAGCGCAGTACCTCTCACACTGCTCTCCCTGCATGGTA
ACTGCTGGTGTCACTCGTATAATCTGGATTAAGGTGTCATCCATCGGCGCGGTCGCTCAG
TCATCTGATTTTAGACTGCAGCGAGCTGGGATGGTGCTGCGTCCGGATGCTCGCTGAACT
GCAGATGCTGCGTTTGGGAGTTTGATTGATAGGAGGAGGAAGAAGCTCAGGAATGGCAGC
AAAGTTGGGGGGATAATTGCTGCCAAAGGAGCAAATGTGCCGCAGGACTTGGAAGATCTG
CAGCATAGGGGCACACAGCAGCTCAAAACAGACTTCTGCATGAAAGCCTTCCTCGCTCCA
CCACTTCTCTTCTTCACCTGTAGGTAAGAACATTTTGAATAGTGTGAGCATTTTGAAAAA
TATTCTGTTCTGCTGGAACTGGAATTGAGAGGGCAAAGAGAAATTATCTCAGTGACAGAA
GTTGCAGCCAAATGTGTCAAACATCAGGGTCAAATATCACACTTACTGCAGGATTAAGCA
TAAGAAATAAACCTCCTGCCTGTTTTCTGATCCCCCTCTTCATTATATCCCAATGGAACA
TTACTGAATTTCCTGAAATGTATTTTTTATCTCCTGCAGGAAAAATAATTTTCTGTCTAC
TTTTAATCTTTCGGTCAAACTTAATCCAGGATAGACAGATTTAGAGGGAGAGCATNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NATAATCTTTTCTCTAATTAAATTTAGCTGAATTTGCCATATTTTGTGTGTCAGACCCAT
GTTCAGGCTGAGTCTGAGTCACGTCTGGTCCAAGTTGTTTCCACTGCTTACAGGATTTAG
GTCAATTAGGTTGCCCTTAACTTAAGTAGGTAAAACTAGGTTTGAGTTCACAAACAATCA
AGGATACCTGGGTACACTTAAGGTAATTTTCCTTTGCCAGGTTTTTGTTTTTCATGTTAG
TGAGGAAGCTGCTTTTCTAAATTTATTCGACATGTCTTTGCATTTTCTTCACAGCCAGAA
GTCCAAAGTATTGCAGGTGGGTGACCGACATCCTGAAGTCAACAATTTGCATCTTTTTTG
CATCTATTTGCATCTTTTCT
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