SelenoDB
Release 2.0
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Promoter Report for SPR00002047_2.0
Identity
PromoterSelenoprotein R (SelR)
SpeciesOryzias latipes (Medaka)
Promoter IDSPR00002047
Promoter release2.0
External IDNone
Transcript SPT00001982_2.0
Annotation
Prediction method(s)
Promoter prediction (5000bp upstream, N/A) [Report annotation error]
OrientationReverse
Structure gene structure

FeatureCol PromoterCol Coding exonCol Non coding exon (UTR)Col IntronCol SECIS
ResidueCol SecCol Cys or Other

ToolboxForward   Reverse    
Sequence
>SPR00002047_2.0 # Promoter # Selenoprotein R  (SelR) # Medaka (Oryzias latipes) Full length # Reverse
ATATCAGAGGATCACATTAACATGTTATTAAAACAGACAATATGGAGAGAAAACTGATTC
GTTTAGCATCTTCTTCTTTCTCTTTCGGCTTTTCCCATCAGGGGTCGCCACAGCGAATCA
TCGTCCTCCACCTCACTCTATCATGAACATCTTCTACCCTAACATTAGCCAACTTCATGT
CCTCTGTTAAGACATCCATGTATCTCCTCTTTGGCCGTCCTCTTGCCCTCCTGCCAGGCA
GCTCCATCTCCAACATCCTTCTACCAATATATCCACTATCCCTCCTCTGAACATGTCCAA
ACCATCTCAGTCTGGCTTCTCTGACTTTGTCGCTAACACAGGCCACATGAGCCGTCCCTC
TGAGTATTCGTTCCTTATCCTGTCTAACCTGGTCACTCCTAAGGAGAACCTCAACATCTT
CATCTCCGCTACCTCCATCTCAGCCTCTTGTCTCTGTCTCACTGCTACCGTCTCTAACCC
ATAGAGCAGAGCTGGTCTCACCACTGTCTTGTACACCTTTCCTTTGAGTCTTGCTGACAC
TCGTCTGTCACACAACACTCCTGACACTTTCCTCCACCCGCTCCAACCTGCCTGCACTCG
CCTCTTCACCTCTTTTCCACACTCCCCATCACACTGAACTGTTGACCCCAAGTACTTAAA
CTCCTGCACCTTCTTCACCTCAGCCCCCTGTAACCTAACGCTTCTACCTTGATCCCTCTC
GTTCAGACACATGTATTCTGTCTTACTACGACTGACCTTCATGCCTCTTCTTTCCAGAGC
AAACCTCCACCTCTCTAGCTGTTCCTCCACCTGCTCTCTACTCTCACTGCAAATTACAAT
GTCATCCGCAAACATCATTGTCCAGGGAGATTCCTGTCTTACCTCGTCTGTCAGCCTGTC
CATCAGCATAGCAAACAAAAAAGGACTCAAAGCTGATCCTTGGTGTAGTCCCACCTCCAC
CTTGAACTCCTCTGTCTGACCTACAGCACATTCGTTTAGCATAAAAACTTTATATTTCAT
GGAGCAAATACCAAATCCGCTTTCTGCAGCTGCTCTGGACTTTGGTTCAATGTTGGAATA
ATGAGAGTTAAAAAATATAGTTTTTGTTATTAATATCTTTATAGATTTTTATTTTCGTTT
TTTCTCATGTAATCCTAAATGTGACTTATTATTTATGAGANNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAAAAATACAAAACACGCTTATAAAGTAATA
AACATAAAAACACTATATAAAAAAGTATCAAACTAACTATTTTAATGTAAGAATTTATAT
TTAAAATGTACATTTTCGCAAATATTTATCGAAAATGTAAAATAAATAGATAAATAAGCA
AATAAATAAATAAATTCACCTTAAGTAAATTACTTTAGCATTACCTGTACATAAAATGTT
TCTGTAAAAACGGGAAAATGAACAAATTTTCCACCAGACCGGAAAACGCGTAAAAAATCT
AGAAAGGTTATCATTTATTTTTAGCCTCTAATCCTGTCTAAAAATCGAGCCTAAATCATC
ACCCCGTGACAATCACAGCGTCCTCACCTGGTTTAAAATGATCCTTGTAAATTTCTCCAC
CAACAAATCTACAAAAAGACATTTTTAATGCTTTACCGGATGAGCTAAGAGCAAAAAATA
AACCTTAATCAGTATCGGTGTAGGAACGTCCTGTATACAAGTTCTCGCGAGAACTAGCTT
TTTCTTTTTTTTAAAGAAAGCTCCACCTGATGTTACTAAAACTGCCGCTAGATGTCACTG
TTTGACAGAAACCCTTGCTGAGTTGATGTTATAAATGAATAAATAAATAAATAAATAAAT
AAATACATAAATAAATAAAGATTTTATTATGTTTTGTTAGTGCTGCATTCAAACGAAGCG
AGTAAATTCTTTCCAAATCCTTTAAAAACTTGAAATAAATCGTAACTTCTAGACACTATC
ACACAGTGAATATGTCCAGATGATGCGATGTATCTTTTGGCAGTTATTAAATGAAACACT
TTGTAGAATTTACGAGGAACATTTGGAGACATTTACAGTTATTTTTTAATTTATTTATGC
TTTATTCATATTTGCAGAGATGCTTTAGTGTCTCAGGTAGCTCCAGCCAGTCAATTGCCA
TCCTGTGGACAATGTTGTTCTGGATGGCCTTCCTGCAGAGTGTTTGCAGTGATGAGACTG
GGAAGAAAGAAAAAAAAAAGAGAATAACAAAAATATGTATATGCATATGTTGTGGTCAAT
TCAGTAATAACATTAAGGATACCTGCATTTAAAAAATGTCAAAAGAGGAATTCTTAGAAT
TACAAACTCCTTCATGATATCACATGACATTACAACATGTAATTTGCAGTGTGACACAAT
ACAAAGGTAGTTTTCATATTTAAAAAGAAATGTAATAATAAAATAGATATACTTAAAATA
ATGTAGAATACAGTTATCTAAGAAGTGTGGTAGGACCTGTAATTTACAGTAACAAAGGAA
GCAATTAAAGGAACAAAAAGAGGAAATACCCTACTGGAACTATCACAGACACAAGACAAC
AAATACATTAAAATAAATAAAATAAAATAAAGTTATTTAGAAACACAAGACAAGTCTGGT
ACAATTTGATAAAAGTAAAGGAACAAAAAAAGGACAGAATGCCAAAATGCAACAACCACT
ACAAACATCAAACAAATCAATATTACCACAAAAAAGATGAAAAGATGCAGGAAAATCCCA
CAACCCGGAAAACCCTTTTACTTCTAGACTGTGAACACTGCCGTTCAGCTGGAAGCTGTA
TGACATCACACAGTCCAAAAAACGAGACATGACACTCACAGCCGTACTCCACTTGAACGA
TGCGGACACTTTTTGTGGCGGCAAAGACGTCCACCACGGCGTGCAGCGGGTTGGTTGCTG
GTATCCCCTTTGCGGAGGCTCCCATGTCCTCTCCGTTGATTATGATGTGCATGTCAGCCA
GACCTCGGGCCTTTGGGACATACAGGACTCCTATTCTGCTGCGTCTGGCCGTCGGGGGCA
GAGCGTTGGTCTTATAAAGATCATCCAGGATGTGGCTGAAGCGTCCAGGCCGACTGCGAC
CAACCAGCTTGTCCTTGGGGATGCAAACGTTCTCGATGTAAAGGTGAGTATCTGTGAAAA
AACTTTTCGTCTTCAAGTTGTGGCCGTCTCCATTTCTCTGATCTTCGTCTTCTGCCTCCC
CCCGCCCCAGCCTGTGACCTCCTGCAAGGCCTCCATCTAGGTTTTCTGGGACGTCAGCCT
CCTCTATGACTTTGTTGTGGTTACGAGTGATTGCAAACACCCAGCTGTCCCCCTGGTCTG
TCAGATCTGGGATGGAGTACTCGGGCACCACCTCGAAGCTTTTAGGGTCCCTGGCCGTCA
GACCGATCCGAAGGTGGCCGCACCAGCCAAGCTCCTTCTCTTCAATCTCTATGAGAAAGA
TTTCCCCGGGCTTTAGGGGCGCTTTGCTGAAACAAACCCCGTTGGCGAAGCTTTCCACCC
GCGTAGCCTGAGTTCCTGTGTGGTCCAGTCTGACGTTTGTCCCATGGATGGGGTGAAACT
GCATGAACTGGTCAAATTGGGGCTCCATTGGGGCGTTCGGTTCGCAGCAACTCACCCTAA
TGTCAGACACAAACGACCTTCAACGTAAAATCCAAAGAGGAACTGACATGAACTGCAGGA
AAAGTTCAGTGAAAAAGACGTGAAGACATTCAGGCGTTCTGCAGGACAGCACAGGGACCC
GCTGTGCCTGTGTCCCGGCCACGCAGGAAGCTTCTGCTAGACTGCTATTTTTAACAACTG
TGTGTCAACAGATGGCGAGATATGTGTAGGAGCGTGTGCTGCAGTGTAATGGGGGGTTAC
CAGCACCCCTCCATGGTGTCTCGTGGGAACACACAAGCCCGTTGGCTCCCGTTGCTCATT
TATTTCCAAAAACCCGTGCACTGAAGTAATAGCAATTATCATAAGACCATATGCCACGGA
AATATGTTCGACTGCAGACGTTTCTAAAAATAGTCCTCGCCGAACCTGCCTGGATTTCAT
TCTTATGTAAAGCAGCAATTAGAGTTAAACTTCCAAGACAGAGAGGTCAGAGGAGGCTTA
TTGGGAAAGAAGAGGAACACACGACTGCTCTTCAACAATGAGCTTCTTCTTATTCCCATC
CTTTAGAGAGGGGTCCGCTTATGCTGACATTTATTTAACTGCTGTGAAACACCAGAAAAA
ATCATCACAGATTCTTTTTTTTATTAGATCACAAAAAGGTAGAAACTGGTTTCTAGTTTG
CGTGCATTTTTGTTGCTGTTTTTTGCCTCAGAGAAGGTGCTTTGAATGAAAACCATCTCA
GCCGCCTGGTGTTGGAGAACACCCCCTCTGCTGCTGTTGGCCTCTGGTACCTTGTGTGGC
GGCACCCCGCAAACTTGGTGGAGGAGGCTAGCTGCAGCCGTGGCTGTTGTGGAGGCAAAA
ACTCAGTCCTGGGAGGAGTTCGGGGAGGCCATGGAGAAGGACTATTGGTTGGCCTTGGTG
GTGGTTCCCCTTTTCAAGAAGGGGGGCCAGAGGATGTGTTCCAACTACAGAGGAATCACA
CTCCTCAGGCTCCCAGAGAAAGTCTATGCCAGGGAACTGGAGAGCAGAGTCTGTCCGATA
GTTCCAGGAACAACAGTGCGGTTTCCGTCCTGGTCGTGGAACAGTGGACCAACTCTACAC
CCTCTTGAGAGTGCTGGAGCATTCATGGGAGTTTGCTCGTCCTGTGTTTTGGGGACTTGG
AGAAGGCATTCGACCACGTCCCCTGTGGTATCCTATGGAGGGTGCTCTGGTAGTATGGGG
TCCGAGGAGCCTCACTGAGGGCTGTCCAGTCTCTGTATGACCGTGCTTAGAGCAGACCAT
AAGCCGGACCCTCGACTACA
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