SelenoDB
Release 2.0
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Promoter Report for SPR00002050_2.0
Identity
PromoterMethionine-R-sufoxide reductase 3 (SelR3)
SpeciesOryzias latipes (Medaka)
Promoter IDSPR00002050
Promoter release2.0
External IDNone
Transcript SPT00001985_2.0
Annotation
Prediction method(s)
Promoter prediction (5000bp upstream, N/A) [Report annotation error]
OrientationForward
Structure gene structure

FeatureCol PromoterCol Coding exonCol Non coding exon (UTR)Col IntronCol SECIS
ResidueCol SecCol Cys or Other

Toolbox
Sequence
>SPR00002050_2.0 # Promoter # Methionine-R-sufoxide reductase 3 (SelR3) # Medaka (Oryzias latipes) Full length # Forward
CGCTCCGCTCCGCTTACTTTCGTGACGTCACACGATCGGATAGGCGGTTGATTAGTTTGG
TCTGAAGGGCAGATTTCATAAACAAACCGTCTGTTAACGTTATAGAAGAGTTCACGCGTC
TTCATGATCCTCAGTCTTTGGGACGAGGTTGTTTTTATCCATTTTTAGAAAGTTGTCTGA
ATTTTGAAACATTTATTTATCCTCCTTCGTGTCCCTGTTTTTGCACATTTCTACTAACTC
GAGTTTGGTCAGAACTTGTCCCGTCGCTCTCCTGTTAAACCGGGTCGCATCCCGGCCTGA
GGCGGACCGACTGCGTTCTGACCATAATAGGAGAAGAGCCGCGGTCGCGTGAAGAGGAGG
AGGACCGAGGGGCTCCTGCTCCAAACCACACCAGAACCAGAACCAGGACTGACGCCGACC
GGCTCCGCGCTTCTGCTGCTCACTGGTAGGTGCCTTCTCCAACCGAACCGAACTTTTGGG
TCGGTTTAGCTCGAGATATTGAAGATCAAATAACCTGAAACATGAGACGCGCGCGCGTCA
CTTGATCCCCTTGAACAAACGGTGCGGAACCAGGAAAAAACTGGACACCCCGCGTGCGCG
CGCGTGTGTGTGTGTGTGTTTGTGTGTGTGTGGACGCTAACAGCTGATGATGACGGGGAT
GAAGAACTGGAGCTACTTCAAAGCAAAGTTTGGTTTCCAGCTGTCAGAACGCAGATCTTA
TGTTTGACTTTGGAGAACTTATGTCACATCTGGAAGATCCTCAGAGAATAAAACAATAAC
TGAAAGTTAACGGATCGATAACAAACCACGATCGATCCGAATTTACCCAAATAATAGGAA
TAAGATCAACTTGTTTTGGGTCTTAATCGGTTTAAAATGACCTAGTTGCCTCTGGAGGTG
TGGCCTATTCGAGCAGGTTCAGGGAGCAGAGAGATCCTCCTCTTCCTCCTCCTCCTCCTC
CTCCTCCATGCAGGCCTCAAACCCTTCCATAAACCTCCATCATGCCCCGTCATTGTGCTG
GTAGCAGAAGCCCCTCAGGGACAGCTGTTGTCCTCCACCCGGCAGAGATGATGGTGATTC
TTGAAGAAGCGATGAAGGACAGCAGACACAGAGATGGAAGCTCTGCTCCTTCAGGAGAAC
GTTACGATGGAGGCGGAGGTCACATGACTGACGTGGACCAGCTGTAGCTTCAAGGGTCTT
CCTGATCTCTGCAGTGTCTCTCTTCCTTTTTGTCGTGTTCTAGTCACATGGCTGCTCTCC
TTAGACGTGGGCTTCTCTGGGCCCTACCTCGCGCCCTTTGGCAAGGCAGCAGCTCCATCT
ACCCTCCTGGCCTGTCTGCTGCTCTTTTAGGTAGATTTAATTTTTAAATATCACTTTTCT
GTTAAATTAATATTTTTGACTGAACATGTGGGCAAAACAGAGGAAATGACACACATTTTT
TGAAGAAATGAGGGACTTTCATACTATAATGATCTGGGTCATTGAAACAGCTTTTTTTAT
TTCTATATATTCATCCTATTAGCCACGCCCATTTTCCCTTTTCTGTTTGTTTGAACTGAT
CAGAACAGAAAAGCGTTTGTTCAGACATCGACTGACACAAAACACATGTTTTGATTCCTA
CAGAATCAAAGAGTCCAGAAATATCATATGGAGCTTTATTTTGAATAAAAAAAAACTTCA
AAGGCTCTGAGATTTTCAAAATAAAAGCAGATATAATAGCTCTAAAGATAAATTAGCTGA
CAAACCGGCTAATTAACTTCCATGTGGTTTGATTGGACTTTTAGTCACAAACGGAAGATG
ATTTCTAAAGTTAAAGATCTTCATCCAGAGTCTTCATCAGTGTCTGCAGGTCGTTTGGAT
CCACAGCGGCTCTGAACTTCAAAATGTCGCTGCTTCTGTCTTCAGAGATCACAGGATCCC
AAAACTGTAGATCATTCTTTGTGTTTTTATTTGCTTGCAAGTCTGCAGATAAAGCAGAAC
TTTTAGTCAACCTGAGATAAAAGACGGATAAAGCAGATGTGGGTAAAGTTCCTTGGTTGT
TGAAAATAGTAAAAATAACAGTCTAAATATGGAAAAGGTCAGCATGCAGATGCATAAAGC
CAGATTTAGTTTTAGATTAAAAAAAAAAATAATAATCTGAAATCAAGATAAAGTGTTGAC
GAAGCATACAAAGAGTTAATGTAAACAATTTCTGCAGATTTTCTCTACCTGTATGGGGTC
AGATCAAGATCTTTTTTTAATGCACTTTAAGATGATCCAAATCTGTCCCCATGTTATAAA
CATTTATTTACATTCATGTTTCAAACGTACAAATAAATTTCTTATTTTTTTAATAATTCC
TTCAGGTTTACAATATGTACTTTAGGATTTAAAACTGTTTTTAAATGTACAATTTTGCTT
TCAAATTTCCAATCTGGCTTTTCATTCACGTAAAAAGACCGTGTCACACAGCCTTTCATC
CGTGCACATTTTGTGCACGGATGAAAACTGGTCATACGTGAATATATGTGGAAAAAGGAA
GGAAAGTTGTGGTCTTTACCTGAATTTTTCACAGATGTATCACGAATGAACCTCGTTAAA
ACCACAGTAGACGTATGAATAAACCACACAAAGAACACATAAATCAAACATGAAGCGTGC
GTTATTATTGTGCTGTTTAGATACAATTCATTAGTGAATCCTGAGTCACTTATGTAATTT
GAACGTGATATCTGCGCTGGATATAAAAGTTATACACCGGTGGTACATGAGTGAAACGTC
CGTTAGACATGCGTGAAAAGGTCACAAAAGCCACAAATTTGTGTATCTCATCTCCTAAAA
AATGCGCACAATTGCGTAAGACTTGCATAATAATTGCGTATAAACTACATGAAAAAAAAA
AGGAGAATTCTCAACCGACCAAAAAGTCAGAACAGCTCAAAACGGAATTCACGAATGACG
AATGCAAGATACACTCAGAAATGACGCATGTCAGGCATGAATCACGAAAGACCAACATTT
CATACGAGGAAAATGCACAAAACGTACGTGGTGGACGTGTGACACGGCTTTTAGGCAGGG
ATGTCAGACTCTAGGCCTCCTGCCTGTTTTCTAGAAATCCTGCCTTGTCTTCCGTCGATT
ACCTGGATCAGGTGTGTTTAGCTAATGGCAGGTTGGTTGGATGGCCCTCGAGGCCTGGAT
TCTGACACCCCTGCTTCAAAATGTGACCCCACATACCTGGTCCTGTCAGGAATCACCGTC
TGGAATGCTGCGGTGCTCCTGCTGATCACAGATCCCTCCTGCAGCTGTGATGAAGACGGG
CTGTTATCAGCAGGTGAGTCAACATGCAGGCGATCGGTCGGAACGTCACAGGAGCAAACC
TACGTGCACGTTTCCAGTTAGTGTGGACGCGCAGATGCTGTAGCCCACATGTGTCAAGGT
CAAGGCCCAGGGGCCAAATGTGGCCCGCCATGTCATTTTATCTGGCCCACGAGAGCATAA
AGGTTTTAATTTCTTAAAATAAAAGTTTTCTTTAGTTGATTACATATTACTTATGTGTAG
CTGCTGCAATTATTCAATGTTTGCAGGCCCTTTTTCTTTATGCAGACAGAATGTTACACT
ATAATACATGTTCTCTTTAGCTCAGTTTTATGTTATTTTTCTTTATTTACTTGGACAGTT
TGATCCTTCATTAATGGAGTTATGCAGGTTTTAATAAGCGGACAAAATGTAAAAGGATTT
ATGGTTGAGTAACAAGCAAAAATATGTTTTCGTTGCAACTTGTCACTATAAAAAATTATA
ATAAATAAATAATGAGTTATTTAACACCTGAACAGACAGGAAGTCACCAAATGCACCAAA
CTTCACTTCATTTTAAAGGCAAGAGCCCACTTCCCAGAATGCACCACCTCACACAGAAAC
AGCAGACTCAGGAGGATGGATGTAAGGATCGTCAGTAAGCAGTGATTGGTCCGTGTTGAT
CTGAGTCAGCGTTTCTATGGCAACAACTCTCACCAATCAGGAGTGAACTAGTTGGAAGTC
CACATCCCTACAAATTCAAATCAGGCTCAGGAGAATCTGTCAATGAAACGTTTTGAACAT
GAGACCACCTACTTTTATAGAGGGATCTGATTGGTCAGTTTATAACCTTAACTACAGAAA
AAAGATAGAAAAAAAGAGGGGTATCGAGAACATATTAAGAAAAATGTATCAGATCAAGAA
CGGTTCTTCTGACCAATAGAATGACTGAGTAACAGCTGTTTATTTCTCTATAGAAGTCTA
TGGGATTTTGGCTTCTTGGAGCCAGCAGGTGCTTCCTGTTTAAAATGTGAAGGGGGAGGG
GCCACATAGTCCAGCTCTCATATACAGTCAGTGCAGGTCACTCAGAACCTGACTCTGAGC
TTAACAAATTTGTCTTTTATTTTGAAATGGAGAAGCATCAGGAAATCGGTTGACTTCAAA
CTGTCAAGCTTTCTTTTTATTTCTATCATCAATCAAAACAGAACATGTCTGTCATCTCAT
GTCTTTGCTGGAAGAGGAAAAAAAGTTTTCCAGAAAAAACTCTGGAGAAGATAACATGTT
TCCTCTCTGCTGAAGACCAGACCAGGACACTTTCTAACATTGTGATCATGTTGCATGATG
GGTGTTTTTTGTCCGCGGTGCATCAGTAAATCTGCCCCNNNNNNNNNNTTTTTTACTGAT
GTTTTCATCCATTAAACAAGAGAAAAGATTTCATCCAGCACACAGCGTGATGGGAGTGTC
TGCAGAAGCCACTCCGGTGTGAAACAGTCCTCCGCTGCTGGGGGGGTAGGGGCCACCTGA
AAGGGTGGGGGTCACCTGAGCATGAAGGCAGCAGAGTCCATGCCGCGGAGTGTCCTGTGC
TTCATCGTTGGTGTCTCTGCTGCTGTTTCTTTTCTTGTAACTGTTTGTTTTCCCTCCCCC
TCCTCCAGTCCAGTCCACGGTTGTGGTTCTGCTGGGGGGGTTTGGTTCTTGTGTTGTGAG
GAGCGCCCCTCCCACCAGCC
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