SelenoDB
Release 2.0
Chart Advanced
Promoter Report for SPR00002053_2.0
Identity
PromoterSelenoprotein T (SelT)
SpeciesOryzias latipes (Medaka)
Promoter IDSPR00002053
Promoter release2.0
External IDNone
Transcript SPT00001988_2.0
Annotation
Prediction method(s)
Promoter prediction (5000bp upstream, N/A) [Report annotation error]
OrientationReverse
Structure gene structure

FeatureCol PromoterCol Coding exonCol Non coding exon (UTR)Col IntronCol SECIS
ResidueCol SecCol Cys or Other

ToolboxForward   Reverse    
Sequence
>SPR00002053_2.0 # Promoter # Selenoprotein T (SelT) # Medaka (Oryzias latipes) Full length # Reverse
TTATGCCACTGCTGTCACCAGACGTGGAGCATAACAGCGAAAAAAAAACCAGAATGAGGA
GCGAAAGACGCAACAGCTTCATGTTAGCCGAGTGCTGGTTGTCTCCCTCTGCTTCTCGGT
TGGACACAGGTGGCTTTACGGTTCCGTCGCTGCGTTCCCTTCTCAATGGTAAATTGTAGG
TGGCTTTGCTTTGGCGCCCCCTAACGTTGGGATGTTATACATGTTGCAAATGTTTTGAAC
TTGCGTCCTGCAAAATCATTTAATCAGATCTAAAAAGTGCTGCAATTTCAGTCTTAAAAA
AAACGCAAATACAATTTTATCCACCGAAAATTGGTTTTATTAAACTATAAACACATGCAG
AACAACAATGCAAATTTAATCAACAAATGGAAAAACCACAAACAGCCCTGTATATTTTGC
CAAGGAAGTTAATGTTACAAGTAGTGTAGATGGATAAATTCAATGCAGGGCCAGAAAAAA
GAAACGGATATGTATGAGTTTTTGCATATAGAAAAAAACACAGAAATCAACAAAATGTTC
CTAAATTACTTGCATTTTATTCAAAAGTAATTAATATGATACAAATTTAATAAAATCGTT
TTTATTTCTAGCTTAGTTTCAGTGGTTCCGTCTCGCCATCCGCTCCTGGTCCACGGCAGA
CTGAACAGCCAGAATGGTCTCTGGATGACAAAGACACCAAATGTTATTATTTAAACTCAT
TTACTAGTTTTTCTGAAAAGGTTGTAACACAAATTTCTACATTATATAACACATTGCACA
TCATGAAGGGGTTTCATTTTATTTATTATTCTATTAAAACTAATAGAGTTGGGGTTTGTA
CTAACCCATTAACTTTTGAGAATAATCCAACAAGTCTGGAAGTCCCAACTCAATGTTGTA
TGAGGTTTGATCCATTTCTTTGATGAAATCATTTCCCCTCTGGAAGTAAAAATAAATTAT
TAAAGCTTCTTTGCTTAAAAAAGTTGCAAAAATAAATAAATAAATAAAAAAAATTAATAC
CTTGAGCTCAGCATAGACTTTCTCCTCCAGTTCTGTCACTTTGGATATGGCATCATATAC
ATTGGTGTCTAAAGGAAGTTCCTGAAACACATAAAAATAAAAATTTGTAATGATTTTTTC
TTAAGTTTACCACAAGTTTTATGACCGATTATTTAGACTTGACAGTTAAAGGTGAACTCA
CCTCCTCAGAGGAACTGTTTAAAGACTCGTGTGTCTTGGGTGCATCATTACTTTTGGAAC
TGCCTTTCAGCTCCTTCACTCTGCCATGATTTCAAACACAAACAAGCAAATAAATAAACA
ACAAACAGTTGAATTGTGTCACCATCATGTCCCTACTCTAAAAGCAGCTTTCTGGAATGT
TAAAACAAACCCATTTAAGAGACTTAAATTGACCCATAACTTGTATGTTTCTCACCTAGT
ATGGGTCTGATTTGAGTTCTAAATAAGGTTGAATGCATAAAATCTTGCAACACCAGAGAC
GAATGGAAGTACTGAGCCATTGTTTTTTATCGCTATATGCCCAACATTCTGGAGACCAAC
GATATTTGCCATCATTTTAAACCTGTACTGCCCAAACATTACCTGTCAGCATAACGTAGT
GTATTCATGGTGTAATCACAGGAAGCCATCCCTGGAGACACCATGGCAATCTGTGCAAGG
AGACAAGTAGATCAGATATAGATCATTATTGACAGCATGTGCATGCAGTGCGGCAAATAT
GCATTTGTCAGTCGTCCATTTTGCATGTTGTGCTAATTTAACAGATAAGGTCTGCAATGT
TCAACTTTGTGAAACAGAATATAGAATCCAGGAAATCAAATTGTGTGATTTCTTAAAATA
ATTTATTTGTATAATGAACCAGAATTTAAATATTTAGCTCCAATAAACAAGGAAGATTTC
TGTGCCTCACAGACATGTTACTTCTCTTTAAGAAACTTTTCTATCCTCTACTTCTTACCT
GTATTTATGTCACCTGTTTGAATCTGTATAAAAATAAAAGACACCTGTCCAGAACCTTAA
ACAATCAGACTGCAACCTCTACACCATGACCAAAGAGCTGTCAAAAGACATCAGAGACAA
GATTGTTCACCTGAACAAGACTGGGATGCACCAATCTGCAATAAGCACGCATCATGGAGA
AAAGAGAGCAACTGATGGATGAATTATTAGAAGATTAAAGAAATACAAGATCACTGACAA
TCTCCCTCCACACCTGGAGCTCCGTGCAAGATCTCACCTGGTAGAGCACAAATGATCTAG
AGAAAGTGAACTGTGAAGCATGGGGTGGAATATAATGGTTTGGGGATGCTTTTCCACAAA
AGGGACAGGAAAACTGATGCGTCCCCTCAAAAAAGGATGTGACTGGGGCCATGTGTGGAG
AGATTTTAGGATAAAACCTCCCATCTGTGAGAGCATTCAGGATTAAATGTGTCCAGATAC
TCCAGCATGACAAAGATCCCAAACCCATCGCCCAGGCAGCGAAGGAGTGGCTACGTAAAA
AACATTTCAAGGTTCTGGAATGAACTGGCCAATCGCTGGAATTTAATCAAATAAAGAATC
TGTAAAGAGAGTTAAAAATGGTTTCCCAGCGACAGCAGCAAAGCACCACAGCTCTTGAGA
AGATCGGCATGGAAGAAGGGACCAAGAGACCAGCTACAGTTTAGACAAACCTGCACGGTG
AAGATCTACAGGAAACCTGACCTTTGTCGTTACTGAAGAAGTACAATACAAAGTATTAAG
ATGCACTTTTGCTACTGACCAAACACTTATTACCTGCACTAATATAGAAAATCTATTTTT
TAACATTGTGCCTCTCTCAGTTGAAGTGCACCTAATGATAAATATTACAGACCTCATCTT
GAAGTGAGACAACTTGCACAATTGGTGATTGTCAAATACATTTCTAGTTATATTTCCATA
GGTCTCAATTTTTTTACGCAGATCATCAAAAAATTTCTAGAGGTTAATGACATTTGTTGT
CCGGGTGCTCACCATGCAGGTTCTGGACTTCTCCCCAATGAAGGAATCCCTCAGCACTTT
GGTTAAAGTGCTCATTCTGAAAGGAATGTGATCACTGTTCATTCCCAGCGAGCGAATGCA
CTCCTATAGGAAACAGCATCGGGTTTAGTTAACAAGTTATGAGGCAAGAAAAAAAAACAA
CAAGTTGCCGTCTCAACCAATTGTGTAGACATCCAACACTCATTCTCAAAAAAACTACCT
TGAGGGCGAGTAGGCTGCGGTTGATTTCTGCAGTCTCGACCAGAGTGCTGCGGTCATAGC
TGTTGACATCAGTGCCACGCTCATTGCCAGCTAGATCAACCAATGAGAATTTGCCATGTA
AGGTTGTAGCACGATCATTGCGCCGCAGCACAATCTGGAGGACGGCATGGGACCGTGAGG
AGTTGGCATTGGCTGAAGTCTGGCCTGATGTTCTGAGAAAACAAAAAGAAGAGGGCAGAA
ACATATTTTTAAGTTTTACAATCTTAAATATGTTATGTGTTGTTATTTATTTATATCTAT
GGTATATAAAAACAGCTAAACACCTGCATGCACTGCCCGTCTGTAAAATCTTGATGACTT
CTTCTGTTGTGGACACATAGACCTCCTCCAGTCCAACCACCTGAACCTGCTGACGGTCAT
CCTCCAAAACTCGGAGTTTGGTCTTTTTGTTCAGCAAATCGTACACCTGTATGTGATAAA
ATATACTTTGCTGGAGTTTACAACGAATACAAAATGTGAAACCTAGTTAAGGAAAAAGTA
CTTTTTCTTACTTTTCCATTGTAGATTTCAAAGAAAGTGACATAGACGGACAAATCCAGA
TTAGCAAACTTCCTGTGGTTCAGATGGGCGAAAACATCTTGGGCTAAACAGAGAACAAAA
TTATATTGAAATGAGAAAAGTTCAATACTTTCCAAATGTAAAAATGAAGCAGATGGAAAA
ATAATACATCTTTGGATCTTCAAAATTATTTTTATTGAGGATTTACTAAAGAATTCAGAG
ACCAAGCATTGAGGTTGTCCTCTAACCTGCAAGTGCATATATTCCTTTGGAGCTGTTCTG
CTGCCTTCCTGTGAAATCTCCTCCCATTGTCTGCCATAAATAGAGAATGCATTAGTCTTT
CAGTCAGAAAACCTTATTTTAAAGCTGCTCCAAATCAGAATGCAGACTTACATGCGTCTT
TCCACTTCCAGTCTGCCCATAAGCAAAGCAAGTTGCCACACCGCCTTCAAAAATGGATTG
CACCAAAGGTTTGGCAGTAAACCTATGCAAGGAAAAAGCAATAAATAAATTGTGCACATA
CTATTGGCATGTAAAGCAATGACAATGCATTTTGAAACATCTCAAAGCTTCAGTAAAATT
AGAATGACAACATTAAAATAATGCACCCCCCCTCACATTAAAACCCACTTTTCGCTAATT
ACAAAGAGTAAAGGAAGGTTTACTTGTAGACAAGCTCATTGGTGGCACTGTCATCAAAGG
AGTAGTCAAAGTGGAAGACTTGGTTGTCCAAGTACTTTGTAAGGTCCACTTTTTGTTTTG
GTTCGTGGACCAACAATGTCCCATTTCCAGGAACAGACACTACGTCTATCTCCTTCTTCA
TAAGTTCTGGAACAGACAAACACACAACTCAAAAGCCAACATTTTTTGTGTGCATGTGTG
AATGACCTTTAAATAAATTTACTACCACACGGATCTATAAATATTTAACAAACCTTGCTT
GTTTAGGGGCCGCTTGCGAACACACACACAAATTCGGTGTGGCTCAATCTGTAAAAATTG
AGAGAGAGCCATTTAAAATGTAAAAGTATCACCAAAAGAAGAGTCCTGCATCAACCAAAG
AAAAAAAATCAATTACTTCAGAAGCTTGGGTAAAACCATTTTCTTCCAAGTGTAACAACA
AAAATATCGTTTTTCCCCTACACCTTGAAGTTTTTGCACATTTTGGTCCAGGTGATTCAG
ATTGGCTGCTGGTCGTACAT
Chart Advanced