SelenoDB
Release 2.0
Chart Advanced
Promoter Report for SPR00002055_2.0
Identity
PromoterSelenoprotein U (SelU)
SpeciesOryzias latipes (Medaka)
Promoter IDSPR00002055
Promoter release2.0
External IDNone
Transcript SPT00001990_2.0
Annotation
Prediction method(s)
Promoter prediction (5000bp upstream, N/A) [Report annotation error]
OrientationReverse
Structure gene structure

FeatureCol PromoterCol Coding exonCol Non coding exon (UTR)Col IntronCol SECIS
ResidueCol SecCol Cys or Other

ToolboxForward   Reverse    
Sequence
>SPR00002055_2.0 # Promoter # Selenoprotein U (SelU) # Medaka (Oryzias latipes) Full length # Reverse
CCAACCCGGACACCAGCGACGACACTGCAGCACCAGGCAAAAGACGTCAAGACACGCGCA
GCACGGATCCTGCTAACGGCAAGAAGTGAAAAGAACTTTTCCTTTGTTTGAAATACAGAT
TTTTTGTTACAGTATTTACTATCAGGCTGTCAACACATTTAGAAATAAATGGGATACATT
TTAAAACTTTTTATTATGAACTTATTAATTATTTTGAGGATGAAAATGACTTTTATGTCA
GTTAGTAAGCATACATACATTTATGTATATACAGATGTTGAATATAGTGTAAGGATAAAT
GGAAACATTGAACTGCTCAGTGTAACACTGTTCAACGATAAGAATAAACCAATTACTATT
GCTGCTATTTTTTTTTAGGTAGATATTTTCTTACCAATATGTTGTTTTTCAAAGCTCCTT
TACTATTTTTCAAAAGACGAAACAGAACAAATTTTTATATTTTAGTTGTTTTTTTTCTTT
TTGACAAATGTAAGTTTAAATTTTATTTTGCACTCAGGTTACATTTGTATTTATAGTCTG
TAAATCCACATTTAAACTAAAATTACTCAAATTTTTCCTAAATCTATTTTATAGCCTTTT
CTTGTTGAAATGTAACAATCAAGTAAGTTGTTTTTATTGGGTTATGAATGTAATTGAATC
GACTAACAAAGGTTTGCCTTTGAAACAGATCATTGACTGTATAAGAGAACTGGACCGAGT
GAGTGTGACGACACCCGTAGAAAATACTTCTGGCTCCAACGAAATGAAGTCAGTTCAGTC
GCCATTTTTTTCACCATACAACGCCACGATGTTGGAGCCAGACATCGTCAGTGAGCAGTG
ATTGTTCAGAGTCAATTTGAGTCATCGTTTCTATGCCAACCACTCTCCCCAATCAGGAGT
GAGCTTGTTGGAAGTCCACCCCCTACCGCTCAAAAGCAGGCTATTAAATCTGGCAAACGT
TGCACATGTGGGGCCAGCAGGCCAGGCACCATATACTTCTACTGAGGCATCTGATTGGTC
AGGTTATGACTTGAATAACTTGCAATTAAGGAAAAAAAAGGAGGATTAGCAAGAACGTGT
CAAAAACAGGTAGCAGAGCAAGAAAGGTTATTCTGACATATAATGAATGAGTTATAGCAG
TTTATTTTTCTTTAGAAGTCTATGGAATTTTGGTTTCTTGGAGCCAGCGGCTACTTTCTG
TTTGGGACGTGAGTTTTCATACGTGCATCTGGCACAGGTGCTCAGAGCTTCAGGGGGTTG
GATGGCTCAGTTGGCTGCGTGTGGGCTTGCCTCAGGAGAAACCAGGCTTCGTTTCTCACG
GGCCACAAGGGGGCCCAAGTCTAGGTCCCCGTGCCTGTCCCCAGTCCGAATAAAATACAG
GGCTGTGTCGGGAAGGGCATCTGCCGTTAAAAAAAAAAAGCGTTACTAAACCACCTGTAT
GAATTGGTAAAAGCTGATTCGCTGTGGCGACTCTGGAAGGGTCGTGCCGAAAGGTGACCA
TGCTCAAAGCATCAGGCGCACTCGTGTGGTCGTTTCCACACGGAAAATTAGTGTGGAAAT
TTGTTTTTGTCATATCTTCAGCAACTGTTTAGTAGAACAACATAGTAAACATGCCTTCCC
TTCACTTACAATAGATCTTAAATAACGATATTTGATATCTACATGTTTAAGCATTTGTCA
GTGCACAGTTTGGTTTTGATAGTTTCCTGGTTGTCCTTAGACGACTGCATGTGTATATTT
TTAGTCATTCATACCTTCCAATAGTTGCTTTAAATATATGCACTATTGCAATGTGAAAAC
CATGTGTTCGGTTTCATGAGTAGTCAGTTCTGCTGCAGGCTGTTTCTTGGTTTTCTGGGG
AAATGTTCAGGCTCACACCACAAACGCCCTGCAGTGCTGCGTCTGTCGGAAGTCTCTGAC
GCCCGTCAGCTGGATCTGCACTCAAGACTACACCGTCTTCCCAGAGCTGTACTGTACCTC
CCCAACTGAGCAAAAAAAAAACACAGAACAGTTTCTACCTGAAGCCTTTACTCAAAACAA
CTTCACTACCCGAAAACATTTTAGGATTATTTTCCTTTCAGAACTTCAATTGAAAATCAC
TCATTCAAATGTTCCTCCACAGCGGTTTTGGAGCTCCTGGAAACAAGATCTACCTGAAAA
CCGAATTACAGGTTCAGACCAGCCAAATGCAACATCCTACCACTGAGCTGGACTCATAAA
AACAAGAAAATCTCTGACTAAAATCCAAGGAATTAAGAAAAAACTTCCAATTTGTCAGCA
AACGACTCCAAAAAAAATCCTCTCTGAGGAGCATCAGAATAAAGATCAGCAGAAACCAGA
CACATGCAACTATTTCAAGACACAGGACCTAAAACACTGAAGATCCTGAGGAGTCATCAG
ATGAACTTAAGGTTTACAGTCAAATCGCTCATGCAGAAGAACATCCATCTACAGGAGGAG
GTTGAAAGGATTCAGAACTTTGGCTTTTGAACAATACTAGCAGGAGAAGAACTGATCGCC
TCCAAAAGAAAGACCTCCAAAGACGACGTGAAGAGGAGGCAGAAAGGAGACACCGCCATG
CTTCCATTGTTGCAGGAACAAAGTCAGAACACGGTCATAGAAACTCAGACCCATCAGCTC
ATGAAGCAAAACAAAGAACTCTCAGCGTGCAACAAAAAAAGTATAACTAAGAATGGAAAG
AGCTTTAAGACACGATTGCCGGTTTGGTGGATATGACAAAGCTCATAATGCAAGCTGCAT
TATGCAAATAAATCCCAAAAATGGGGGGAAAAAACACTAAAATGTGTAAAAAAGATGATG
AAGAAAACTGTCAAAAAAAGAATGTAAATTCAAAATAAATGTAGGGATGAATACATATCT
GAAGTTTTAATAAAATACAAGAATGGGAAATTTCAAAGAGAATTTTACCGTATTCTAAAA
GAAAATCTTATTTATCCAAAAAGTGAGGACAAAACACATCATTACAGAAAAGCTACAAAT
GGAATAAAAGATTTCCCCTCTAGCTTTTAGGTAGCTGTTTCACATGGGGAAAGCCAAAGC
AGCTTTTGAGCTATACATTGATCAATTTGTACGGAATTTTTAACAACTTGTTTTTAAATA
GCAAAAAGGGTGAAAAAGAACACAAGTAAAAGATGTTATCAGTACAAGTTAAATCCCTTT
AAGGCAGGGATATCTACAAGACCCAGCATGCACTCTTCAAAGGTCCAGAAGGTGGTGCGG
ATCAACGGACACACGTTGGTTTGATGATAAAATATGAAACTAAAACACCAACGTCAGAGA
ATTTTGGCCACATCTTGAGATAGAAATGTATTAAATTGCATTAATACTAGACTTTTTATA
GTTAAACTGATACAAACTTGATTTTAATAGACGGAAACCCTTTGAGTATTTAGGAAAAAA
CATAAAGATAGAGAATTATTTTAAAGGTGTTGCAGCTCATTTGACTTTACAGGCAGGACG
TTTTTTTTATTTTGCGACACAACAACGTGCTTTTTGCCTCAAAAGTTTGCCAATAAATTA
CAAGATTTCTTTGAAATATTTAGCAAAGCATAAGTTATGTTTCATGCACTTCTTCTGGTA
TTACAATAACTTTGGGATCACTCGAGAAAAACTAAAGAGACGCTTCAGTCTGAGCTGCTG
TGACACAAAGAAAACATCTATCTGTGGAGCATGATCTTGCCTGGAGGGATCTTGTTCGGA
TCGGGGCCTGTTTTGGCTTCACTTTGGTGAAAGAGAGCCGTCTGGGCTTGAAGGTGGGGT
CTGGGTGGAGGGCTGCTTACAGTGGGGCTCCCCAGAGGCAGCGCCGCACGGCGCAGGGGC
ATTCTCCACCTCAAAGTAGCCGAACATCTGTGCACAGCTTGCATGTTGAGCGTCAGTAAA
AGTCTGAGTCACTACACAAACCCTCAAGATTTCACTGGAAGACACAAACACAACAAGCGG
AACCCTCAACTACGGTATCAAAGCAACAACGTTCACCTCAACACCCAAAAAAAAGGATTA
TTCAACCTGCTTCTGTTAAACCAGTTGGATAGGTGGTATTAACAGTTACAACAGATATTT
ATTTCCCACACTTTCCACTGCAGAGAAAAGGTCCAACTCCTAAATGCAAAAATAAATCAA
TAAAAAGCAGATGCATCTGAAAACTTCACTTTTTGTGCTCTCTGATGCATGACAGATTGC
ACACACAGTATGCATTAACACTAAAACACAAGCATGCATACAAACGGGGCAGAAATTCAC
TTCAAAAAGAAGGATAATCTGTCCTCTCCATCAAAACAGATCAGAAACGCCGCATACTCA
CTTATCTTAGATGGGAGGCAAATCATAAACCTAGTCTCTCCTGTGCTTGAGCTCCTGCGG
CTCAAACCACCCAAATGCTTTTGAGACGTCTTTGCCTCAGAAGTCAAGAAAAAAAAGGAG
AGAGAAAAAACCCAGAGGAGGAGCAAACAGTCTACAAAAACAGACTTAAGATGTGAAACC
ACAGTAAAAGTGCTTATAGTGTCACTTTTACCCTATAAGCTTTTATTAGTAATCAAGTAT
TTAAAATCATAACGAGGGTCAATTTAAAACATTTTACCAGTAAGTTTTATTCAGTCCTTT
CATTTAAACTGTTTTGCAGATTTATTACCTAAATAAAACAAATCTAACAGATGATCTGAA
CGTAGAAAGGAGCCTTTTAATGATTTAATTACTGGATAGGATTTTTGGGAACATAGAAGG
ACGTTTTTCATGAATGATCTTTCTTTTTCTGGACTTCCTACTCTTATTTAACCATCCGGA
TAAAATGTAGGTGAAATTTTGAAAAATAAACATGTTTTTGATTCAAAGAAAACTGCAGTG
AACACTGGCAGTATCAGTAATATTGTGTAAGACAACATGAAAAAATCAGCACTGCAAGTT
TTTTAAATGTCTAATGTTTTTTTCTTGTTTATTGTATATTTCATAAATGCAGTTATGCTT
TTCATATACGCAAAACTAGA
Chart Advanced