SelenoDB
Release 2.0
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Promoter Report for SPR00002060_2.0
Identity
PromoterSelenoprotein W (SelW)
SpeciesOryzias latipes (Medaka)
Promoter IDSPR00002060
Promoter release2.0
External IDNone
Transcript SPT00001995_2.0
Annotation
Prediction method(s)
Promoter prediction (5000bp upstream, N/A) [Report annotation error]
OrientationForward
Structure gene structure

FeatureCol PromoterCol Coding exonCol Non coding exon (UTR)Col IntronCol SECIS
ResidueCol SecCol Cys or Other

Toolbox
Sequence
>SPR00002060_2.0 # Promoter # Selenoprotein W (SelW) # Medaka (Oryzias latipes) Full length # Forward
ACTGTCTGTGCTGAGAATGGTATTTCCACAGGAGCTTTTGCCCACTTTTCTGCCCCCAAC
AAGTATCAATCTGAGCTCCGGGAGAGGCTCCATCTTCTCTGTTGAACAGAAGTTTGCATC
CAAATGTTAGAAACTCCGAGCAAACACTTCTGAAATGGTTTAATGACATGGAAACCCTCT
CACCCAGCTGTGCCCTCGCTCTGTGTCTTTGCTGCTCTTTCTTCATCAGACGTTTTCTGA
CTCTCTCTGCTTCTCTTTTCATTCTCCTCTCCACTTCCTGCAGCACTTTCATCTCAATCT
CGTAATGCCAGCTGCTGCAGCAGCGGCGGCTCATGGTTTCTTCAATCTTCCCAATCAGTT
CTCGGACCTGAAACCCTTCTCCTTTGGTTCTGCTGTTCAGCACATGATACCTGTCGCTGC
ACCTGTCAACCAGCCACTGCAGCGGTGTTCCCTCGCTCTCGATGTACTGCTCCGTCGTCG
TCGCTCCCAGCCAGTCTCCAAAAGTGAACAGCAGGATGACACGACTCCAGATGTGCTCGC
TGATGAGCTCGACGTGCTCCTGCACCGATCTCCTGTGAGTCTCTGTGAAAGCCCGGTCCA
CACGGATCGTCAGTAAAAAGACATGCGGCCCTGGAGGGCAGAGAGACGGACTGAGCACCA
TTTCCCTCTGATCAAAGTGGGAGCTCTCATCACTGAAATAGTTCATCCACCAGCCTGGAG
TGTCCACCACCGTCAGCTGTCTCCCAAACTTCACTCCCTCTCCAACCTGGCACCGAGCCG
TTCTGCCGAGGTGCCGGCGGCATTCTCTGCTCAGGATGGTGTTCAGGGCTGAGGTCTTCC
CTGAACCTTTTGCTCCAAGCAGCACAATCCGGATGTTAGTGATGGGTCTTAGCCTGCCTG
AGAGAACAAATATGGGCATGAATACCTAAAGCTAAAGTGTTTTTTCAGAACTGCTCTCAG
ATGTGCAAACTGACAAAAGTCACAGTGAGTTTGGGATACTGTGGACAAACACAGCGTTTG
TTTCACTTTGCAGATTTTTGGGATACAGAGGCAATTTTATTGTGGTGATTGACACATCCC
ATTTAGTTTCATCCACAAAGTGGTCTCACTGTGTCAACAGGGTTTGTTTTGGTGGAGGAG
GAGCAACAGTCTGGGAAGGCATCACCAGTCAGCGCAAAACCAATTTGGTTCAGTCACTGC
ACATTCTTTCCTCAGAGACATCATAGAGCCACCATCATCCCCCCAACTTTCTGTTCATGG
ACGATAATGCTCCAGCACATGGTGCCAGAATTCTTACAGCTGGGAGTGCCTCATATGATG
TGACCAGCAATGACCCCTGACCTGAACCCCATAGAGTACGTCTGGGACCCACTGAAGCAG
AGACTGGATGATAGCACCCCACCACCAAGTGACCTGTCAGAACTGCACAGAGCATTTGAG
GAAGAGTGGGACACCACAGAACAACATCATGAGGCTAGAGGGGAGACGTCGCTGTCATTG
CAGCAAATGCTGGAAATACCCTCTATTGACATGGTCAGTGTTTGTTATTTGGGGCTGTCT
TTATTATTATCTTTATTTAGGAATAATATATACAAAAAAATGAATCAAAATGGTGTTTCT
TCTCATTCATTATTAGTCAAATCAAAGGGATTTTTTACACATTGTGTTTTCTGTCACTAT
TTCTAAGATAACCAACTATTTCCTTCAGCAGTTTTTCTCTTTAGATGAATTTAAAAACAC
AAAGCTTGCATGCAGTATCACAAATACTATGAGCTGGCTCAAAGAAGTAACTTCTTTCAT
ATTTTATTCTTTTTATATATTTTTTTTAATCTAAGACCCAGGAAACATTCGGCAGAACAT
GCTGCTTCAAACTGGCAAATCTAAAGTTTTGGACACCAACTTTTGGAACCGGCCTCTTTT
CAGTTTTTGAAGGATGGGGCCTGTGTCCTCTTGGTTTCCAGTCTTCGTTGGATATAAATA
TATGACTCTTGATGGGATAATCCATACTAGAATGTGAAAACATCTGGGGCTCAGAAACAG
ACTGTGGATGAGAGACTATCAGGAACCTTTCCTTGTTTTTTGTTCAAGACCTCATAGAAA
CTGTCTGAACTTAAACTTGGACTCAGGATTGATTGACACCTGTTGGAAAAACCTTGTATA
TATCTCAGGATAGTGTTTATTTGAGCTCTTTGGGAGCATTGAACCCACCTTTCAGCAGAG
CTCTCTGTCGTTTCATCCCGATGAGCCTCAGATGAGCTCTCTGGTCCACGGCTCTCTTCT
CCTCTGCAGCTGCCTGAGAGATGCTTTCTTCCACCTCAAAAGCTCTGTTTCCGTTCTCCG
ACATAAGTTTCTGTATCCTCAGCAGCAGCGCTGCTCCTTCAGTCTGCTCATTCAGAACAA
CACTGTGGCTCCTCTGACCACACTTCTCAGTCAGCCGGCGGAGGGCCGCTCCCCCTCTTT
CCACGCACTCCTCTGCTCCTTTGTGTAGAAACCTGTCCGCGGAGGTGAAGACCACCATGC
AGTGACTCCACACCCCATCACCCAGCAGGGCCACGTGCTCCTCCACAGCTCTGCGACGCC
TCTCAGAGAAGGCCGAGCTCGCCTTGATTACAATCAGGAAAACATGAGGGCCCGGCGGGC
ACAGAGAAACGCTGCTCACGATCTCCCTCTTCACCAGCTGAGACGTGTCCCCGGCGCTGA
AATCACACCACCAGCCTGGAGTGTCCACCACTGTGATCCACCGTCCAGCCACCACACCCA
GCCTCCGAGAGCAGGAGGTCCGCTCTTTGGTCACAAACTCCTCTTTGCCCAAAAGTAAAT
TCCCAACAGAACTTTTTCCAGAGTTTCTGCCTCCAAGTAGAACAATTTTTAGCTGTGAAA
TACTCCAGTCATCCCCTAAGAAGACAACATTTATACAGAGGTATAGAAATCACAAAAACA
TGCATCATTAAGAATGAAAAGGGACAATCCAGCTTGGTTGTGAAGAAAAAGTCAGTGTTT
AAAACTTACGTTCTGAGAGGTTGCTGGTTGCCATGTCAAGTTCAGCGGCGTCTCTGCGTT
TACTTTTAACAGCTGAGCTCGTTTTAAATCCCCCTTTGGGTTTCTGTTCTCTGCTACTGT
TTGCTGCTGAAGGGATTGCAGCAAACTCTTGAGTTTTATGGGTCTGTGAGTCTAAAGGTC
GCCTGTAATGAATAATCAAACTGATTCAGGTAGCAGGAGATATGCCTCACAGCAGCGAAA
ACTAAACATGGACCAAATGACACACAGGAAAGAAAGCTGTTTGCACTAATGAGCAATCCC
AGGAGAATTCAAAAAGAAGATGGGAACCTTTCATGAGAGATTTTACTCCTTACCAATGTT
TACTAATGTTAATGCAAAAAATACAGCATCTCAACCATTCTTCTTAACTGTCTAAAATCT
CTGAATGCCTGTCATCAACTACGAATAGCTCACTTATCTGTCAGTCCATCTCATGTCAGG
CACTTCCATGGTAGAATATCAAATTCTGCATCACTTCCGTACATGTCAGACAACTTGCTG
AAAACAATTCAAGCTCACAACAGCTCTCTTGTTTTCTGTTATTTCCATATCATTTCCTTT
CCACTGTTTTTCCATTACATTGTCAAACTCGTGACAGTTGAGCCCCTTGTGACCCACCAC
CCTCAAACCATTGCTGTTTAAATTTAAACATGAAGAAAAGACAAAAAGCCCCACATTTGA
CAGTCGTGGGTGATCAAAATCTGTGAAATTTGTCCCAGGAAATTATTCTATAGACTAAAA
GGATGTGACATTCTGCTTGAGTTGCTTTGAATTTTAAGAGTGGTTTCTATGAATCTCAAA
TAATGTATTTAATAAAATTAAATAAATGTTGTTAAAAATATTATATTTTTTACGTCTGGA
ACTACTTCAGAGGAGTATAAACAATGGCGTGGAATGTTTCTTACAGTTACAAACAGGCAT
AAATAACAGGATCTTCCTGGAAAAACACATGCCCTTTGTTTAGTTTAGTTTTTTTCAGAT
TATTAAAAGTTTCTTAAATGCATTCCAAACAAAAACAAGAAAACTACAGTAATTTATCAA
AATATATCAAAAGTGTTGTTATTTTGAATTGTTTTTTGCCTTGCCTTTGCCTATTTTCTT
TCATTTTTTTATGTATGCGCATTTATAACGTTTGTTTATCCAAACTCGGTTTGTATATGA
ACATTTAATTTATTTATTTTTTAAACAGGATCTTCCTGTATTTTCATCAGTTATTAATAA
CATTTAGTGTTGCCAAATCTAACAGACAATTTTAAGCCGAAACACAGTACNNNNNNNNNN
AAAACAATGTTCTACAAGCAAAACAGCAAAGACCATGTGAATATTTCACATAATGAATTT
AGAACATTTCAAAACTTTAACATTCACTGTCTTTTAAAAAATTTATTTATCATTATCATT
ATCATTATTATCATTTTTAACAAGTACTCTTCTGGATATATGGATAACATAGTTGTGTGT
CTCTCTGTGTGCAGCTCTTGGTAAAGATCATTTTACAACAACATTTGAATAACCCTTGTA
TTTCTTTTAAAAGAACGACTTTTTAAATCGACGTGAATCTTTAAAAGACCCTCTTTAAAG
ACTTTGAAATACGTCTAATTGTGATGAAATCTACTCAACCTGGCAACCCATTTCACGCTG
ATTACGTAAGACGTCATATAAAGCCTGCCTTCAGCGGCTCCGCCCTCCAGTCGCAGGTTG
TTGTGTATCACTGCGCTGAAGTCGGTCACAGCCAGACAAACAGTGGAAATGGGGGTGAAA
ATTGATGTGGAATACTGGTAATTAGGCATTTATGTTTATTTTATTTTTAGTATAGTTAAT
CATCATTGTGTTTTAACTTCATAATGTTATTTACGTTGACTTGTGATACGTTAGCATAGG
CTAGCTGACAGCTAAGCTAGCTCGTTTTTTTGCAGCTCGGTTTGATTTCTTCTCTCTGAA
TGTGCTCTGCTCCATGCAGC
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