SelenoDB
Release 2.0
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Promoter Report for SPR00002241_2.0
Identity
PromotertRNA Sec 1 associated protein 1 (SECp43)
SpeciesPetromyzon marinus (Lamprey)
Promoter IDSPR00002241
Promoter release2.0
External IDNone
Transcript SPT00002176_2.0
Annotation
Prediction method(s)
Promoter prediction (5000bp upstream, N/A) [Report annotation error]
OrientationReverse
Structure gene structure

FeatureCol PromoterCol Coding exonCol Non coding exon (UTR)Col IntronCol SECIS
ResidueCol SecCol Cys or Other

ToolboxForward   Reverse    
Sequence
>SPR00002241_2.0 # Promoter # tRNA Sec 1 associated protein 1 (SECp43) # Lamprey (Petromyzon marinus) Full length # Reverse
GCTGCGCACACAAACAGGGGGCATGCGAAGCGTCGGTCTCGATGGAGGTCACGGGGGACA
AGGCCAGGAGGTCATCACGGCCAACGCCGTTAGCGCCGCCACACTTCGTCGTCGCTTCCG
GCCTTCCCGACAGATCGTACGGCCGTTGCGCAATCGACACCCGACTGTCACATGTGCATC
GTTCCCACTATGCTTTGGCAAAGAGGGAAAAACGCTGCAAGGCTGTATGGCCACTGGGCA
GCGAACCAATCTATGCGGATGCTTGAGCATTACCTCCTGGTGCATGTGGATTTAGTTTGT
GGATTCCTCGCACGTGCCAAAATATACATTTTTGACAAATAACCAACGAATGTAGTGCAA
CACGAATTTATGCAGCCAAAACGTTCCTGAAAAGAGTCGCGAGTCACAGCCGAGGCTATT
ATTGGTTCTGTCCAAATACATTCATTATTAATTTACCCTAATTCAGTAACAAATACGAGC
TTTCTTGAGGTGTGCTTATGTAACAACCGCTTGGTCTATCTGCTATTAAGTGACGGATGC
CTGCTACTCTGCGGCACCAAAAAACACGCTGAAGGTGGCGACTGGAATGTTTGTTAACAC
TTTTCCATGAAGGTAACTGCTGATGACAGAATGGTGATGTACGTTACACAGCTGTGTTTG
AGTTCCTCTTTCAAGTCACTGGTTGCAGAGTGCCGCGCGTCCGTATCACAAACACTGGCA
GAGATGTACATCTCATGCTTCGACGGCCTTTCCAATGCCCTCTTGGCTGCCATGCTGCTT
CTCAAAAGGAAAATTCGACCCAAAATAATTCGTAATAATCATCATGCTTTTCATCGACAC
TGCCTTGTAACAGACAATCGGATTGCACGCCGATGTTTTAGGCAATGCCACTTCTGCAGA
GCGTAAAGAGGGCAGGAATAGACCGATTCGTTTGGTTATTATTTTGTTCCATAAAACTGG
GAACGTTTAACAAAGTTGACACATTAACGGTTTTCAATTGACGTGCGAGCAGATTTTTTT
GAGGGCAGACAAACCCTTGACTTCCTTTGTCTGATACTCAATACCTACTCCATAGAAACA
GGGTCATCTTTGAAGCTTCTCAACACTTCCGGGTTTTTTTATGGTCCTTCAAGTTGGAAT
GCAAACTCAAACTACGTCAGTCATGCTCAATCCCCCTCGGTGCTCTGAAGACGGGGGAGA
TCGTCCCGACACATTGGCCGATTCTACGTGTTTGTCGTAAGGCAGTATTAATGACGTTTC
ATGGACTCTATTTGCTTATTCATGGAGCCTGCGCACCATCGTCTCTCGTAGGCAAATATC
TGTCCTGTGTGTTCCGTTCTGCCCGGCACGAGTTTGAATCTTCATGAATGACCCACGTTC
CGGATATCACTGCAGTGAAAAAAATTTAAGCGGAGAGCTTTCGGGCCACAGCGCCGTCAC
TGCAGTGTGCCTGAAATCACTTGAAAGTGCCTTTCTTCTCGTCATTAATGAAGGGGTCGA
GCGGCGGCGAAGTAATGAACCAGACTACCAAAATTTCATTTCTGGGCAAGGCTAACATCA
GTAGCAAGCGATATCAGAACCAGCCATGCGCTATCCGTCCACCACCCCGACCTCTGCCTT
CAACCCACGACCCGCGTGGTGAAGTAAGGCAAAGAAACCCCCTTGACCGACAAGGTCTTT
CCCGCAACTCCGATTAGCACGGGTTGGCTACGTACGGTGCGAAAGATGTTCAACGTAAAT
ACATCGATACAAGGTGCGAGAGGAGGTCTTAATCCATCGGTGTTTAGAATGGCTGGAAAA
TTTGGTTTGTTCTCATGAGCCGAAGAAACTTGTGATACACAATCGAGGTCCATGTGATAC
TTTAAAGCAGTTTTTTTGTTTGTTTGCGGTTTCATTTTAGCATGTGGGAAATGTGGCTGG
ATTGCTCAAGGGCCTGATCGCAAGTCAGAGCCCGGAGCTGGCACCGCCAAGATCCTGGGT
TCAAATCGGGTTTTCAGCTGTGCGTAAATAAGCGGGGTTCTTTATAGTGAGCTCCAGCTT
CTCCAGCAGTCTCCAAATGCTTCTCAGAATTTGCAGCAACTATCAGGACGTCAGCAATTA
CCAGCAAAACTCCTGGTTAACCGATAAGGAACCATCCCATGACCGCACCCTGACATTGAT
CAGCCTCCCATTGCATCTCTTCCAGATGGCCATTCCACTGGTACAGCCACATNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNATAGTTGGCTAGCCTGAAAAGCAATTAT
TTATTATTTCTACGTGACTTTACCGAAAAAAAAAAGAGATGTTAAATAGTTTAGGCATCA
GAAGGCATCCACGTTGCATTCCAAGGTGAACAAGGAATGCCTCCAGTTTCACCCAGGCCT
GCCCACCATAATGAAGGTGCTTAATTATCATGGGCAGATGGTCAGCGACCCCCAAAAGCA
CAAATCCTGGCCTTTGAGGCATTGACTGGGCCAAGAAAGAAGGGGTGTAAGTATTCTTGG
TTCTTTCGGTAAAGTCACGTAGAAGGGAAACAAAATTTAAGGGGTGTAAGTGTTTATAAA
TGACCCCCATGTATACTTTAATAGACTCTTGGGGCAAGTGCCAATCGCACCTACAAATGT
CGACATGGCACATGAGGAGGTGGGTGGGCAGTACTACACCTGGCCATCCTTTCTCTCCAA
TACTGATGTTTACACAACAACACAAGGCACTCGTTTAAGGCTGCGTCGACCTAGGAGAGG
CCCAGAACCGGTTCGGAATAATCACCACCAGTTTTACTGGTCTTGAGCAGGAGAGCGGCT
CGGGTCACCGACTTCATAGCACAGCACCCTAACCACTGCTCCACCGCTCCCCAAATGTGT
GTGTGTATATATACACTTACACAGAAGAAACAGTGGTATAGTGGTAAGGCCTATGCATTA
TGAACCTGGTAACCTGAGTTTGATGCCCAGTCACAGCTAATATCAGTAGAGGATGATCAC
TGAACCGGTCCTGGAACCCCAGGCTTGCCCCACCCATCCCCCCCCCCCTTCACAAACCCA
CACGGACCAACATGGTGTCAATCCAGCAGTGGATTGACAAAGGGCTGTAAATGAGTGTAA
TTATTATTCGACATACATGCGCATACATATGACTGTATTCGAGGATCAACTCTCAGTTCG
ATAAAAAAAAATACAGATTTTTGTTCAATCAACTTGCACTCCAAGAAGGCCGTGCAGATG
ATGGGCTGCAACATTTATTTTTTTTACGTGCAGCGACAAATATGGGAAGGAGGCAGTTCT
CGTTCCCCACAATGACAAAGGCTGTCACCGCATCGCGCGCTTTCAGATGCGTTTCTGCGG
CCGTCTGTGACCGTCTGTGAAACGCTCTTCCTTCCAGTATTAGGGAGCAACTGGAGCTCT
GCACTTTTAAATCTAGATCGAAAACTATTTTGTTTAGAACTGCTTTGTGTGTAGCACGGT
TGGCTACGTGTGGCGTGAAAGAAGTTCAACATACATACATTCATACATACGACATTCAAT
GACCATCTTGTGTTATTCGCGTTACTGTAAAAGGTAACCCATCGTCACAAAGTTTCCCCA
ATGTCACTTTAAAGAAGTCGGAGCGCCTATGCCCTGGGGGGCCGAAACCGCCTCTCTCTG
TGCCATGGCATGTTGCCATTCGTTACGCTCCATTCACAACCGGGCGCCCCCCCTCACCAG
AACAGTGAGCAGGGCGGGTGAGAGCAGGGCGTCGTCGCCTTAAATCAGAATGAGCATTCC
GACGATGCCCGCCCGCCAGCCAGCCCACCCATTGTTAGCATGGGGGCATTCACCACCCCC
CCCAAACCCAAGGGGGAAATTGCACGTTCGCTCTGCTCAATAAAATCGGTTCATCGCGGT
GTTAGGATCCAGGCGAGCTCTGCCTCGCCACTGCTTTGGCTGAGAAGCCGGAGGAGGAGA
GGGGGGGGGAGGCACCGGTTTGGCAGATGCCGCCGAGAGGCTTGGAGCCACTTTTTACGA
TTAGCTCGAAGGCCAAAGGGGGAGTTGGTCAGTCGGTCGTCCCAACTGGGGGAGCAAATG
CTACGAGTATCCACCATTTGCAGAAAGCTCGTCGTGATAATTTTATTTTATTATGTTTTA
TATTTGTTATTTTATTTCCATTCTACGTGACTTTACCGAAAGAACCAGGAAGATACGTAC
ATTATCTTTTTGCTTGCTATTTTACCAAGTAAGGCCCACTGAGCTATACGACATTTTTTC
AGAGGCGACTTGGCTATCACAAACGATAGCGCAACAAAGTGGCTTATCGCGTGGAAATGT
ATAGCAGCCAAATACTCTAAACGCACGTTGAATCTAAATGTGGCGGGGGGAAAGTGGAGG
ACCCAGACAAAAATCCACGCGACTATGGGGAGAATATGCAAACTCCAAATATACATGCAT
CACAGGGTCAGGATCGAACTCATGACCTCCTGCATACCAGGCGAGGGAGTTAACATATCA
CCATGGTGGCACCATTACGGCTGTTTCATATACATACTTTATATTTGTTATATTCCGTAA
CACACGTATATTTCCAAAATTTAAATTCTCTGTTGAACGTACCCTTTATTACCAAAAACT
TTACACAGCTACCACCGCGACCTTGCTATTGTACACACCTGCGATCCAGAGATACAATGC
TCCAAGAAAATGATTATTGGCATTATCCACCCAGGGTAATACTAATAAGGCATTTTGGGG
CCAAAGGCTCAATAGCTAATCGACTGTGAATTCAGAAATCGGGGATCAAGCCACTGTGCT
GTTTAAATGTAATGTTGAAGTTAGGTTGCACCGTACGTAGCCAAACAGAGGTGCTGTGAA
GGACTGAGAAAAGTGACCTGCAGATATTTCTTAGCTAGATCTGAAGCTGAATTAACAGGG
CAGTGCTCATCTGTGACCCC
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