SelenoDB
Release 2.0
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Promoter Report for SPR00002397_2.0
Identity
PromoterMethionine sulfoxide reductase A (MsrA)
SpeciesRattus norvegicus (Rat)
Promoter IDSPR00002397
Promoter release2.0
External IDNone
Transcript SPT00002332_2.0
Annotation
Prediction method(s)
Promoter prediction (5000bp upstream, N/A) [Report annotation error]
OrientationReverse
Structure gene structure

FeatureCol PromoterCol Coding exonCol Non coding exon (UTR)Col IntronCol SECIS
ResidueCol SecCol Cys or Other

ToolboxForward   Reverse    
Sequence
>SPR00002397_2.0 # Promoter # Methionine sulfoxide reductase A (MsrA) # Rat (Rattus norvegicus) Full length # Reverse
TGGACAGCGTGTCCGTCTCGCGGGCAGACCTCCAGGCCCGGCTGTCTCTGAGGGACAAAG
TTCCCAGAGTACGTGAAGCGGCGCGGGCCAAAATTTATGCTGGCTGGGCGCCACCACGGG
GAGTTAGAGTTCCTGCCGTTTCCCCACCTCCTCATCCAGGGTTCCGGGTGCGATGTACTC
ACTCAACCACAAGTAGAAAAGGGAAATCAATGTGTGTGCATAAAAAGGCAGCGAAGTAGA
AGAAAGGCAGACCTATAAAAGGATGAATAGATGGACAGCTAGGACATTTGTTTCTTTCGG
GACCATCTTGATAAATTGAATCGATCCAAAGTGAAAAACCAAAGCACACCACACCACAAA
TGATCTCAACGTGAACTATATATATAGTGTGCGTGTGTGTATAAATGTATAAATACGTTC
TTCAGCCCACATAACGCTGTTTATGTGAAATTAATGGTGAAGTTGGATCAGACTTCTGAA
ACTATGAAAGAATATTCCTAAACCAAATCACCAGCCTTAATCTTTAGGTGGCTAGGACTA
GATGAGTGATTTCAGAGGTCCTCTGAGATTTTGGATTACACACTGCCAAAATGGGCGGAT
AGTTTCATATGAAGGAAGGAACTAAGGATTAGCACCCACAGGGATTTGAAGCTTTGAACC
TAAGCTTCTCCGTGGGTTTAGTTACCACTTTGTGTTCATGTGGGACTGAAATATAAGGAC
ATCAGGATTAGTATAACATAGAATGTTGCCAGACACACAACGTTAAACAGATTAAGGTGT
TTACCTTATAATGTAGAAGTCCCCTGGGCCAACTTGTCTCAACAGTTTACTTTCAGCTTG
CTTTTGCTGTGAAATTATGCCAAGCAGGTTATTTCTACAAGGCCTTGCCTGAAACCATCC
CAAGGTTTGAAGGGAGCCTGATCACTAAAGGAAAAAAAAGTGTGTCAAAAAAATGTACTT
CTAATTTTCTGCCCTTTGATACACACTGACTTGCTTTTTCTGTTTTGTGGTTCATGGAAC
ATGGGAAATATGCAAGAAAAATTTTGTAACTAAATACTGTGTAACCGAGGAATTTGTAAC
GTTAAAGGAAACTACTTGTGTAATGTTAGGTACCCCAGAACCACAGTCCATAAATATTTA
GTAAGTAAGATATATATTAAAATGCACACATTTCTACTTACCTTCTAAGGAAAAAATGAG
TTTTAAAAAACAAATAAAAGCACTGTTTAGAGTTGTATTGTTCAGAATAGTGGGTCTCTT
GCCTCTGTCTTTCCTGCCTTGTGGTCCTGAAAATCCAACTCAGAACATCAGGCTTGGTCG
CAGGCCCCTGTACCTGCTGAGTCATCTTCCTGGCCCCACTTTAAACATTTCGAAGGGTTC
TGTGTACGATGTTTAAATATTCTCAAGGATTCTCATGGTTGTGCTATACTCATGAAAACA
TACATTTTTGAGGGACAAGGGTATCTCAATGTCTTTAAACAAATTTAACCCCATTTAGCA
AAATAGCCATGTTAGCCAGGTTGTTTCTCAGCTTGTGTGTTCCTTACAAAGTCTCTCTAT
GTAGCCCTGGCTAGCATGGAATTCAGAGACTCACCTGCCTCTGCCTCCTAAGCCCTGGGA
TTAAAGCTGTGGCCACCATACCAAACCTCTGAGATTTGTTTTTTGAGAAGATTGGTAATT
ATGCTATTTTCAAGACTAGGTGTTGCTTTTCTTCAGGCTCTCCAACCACTTCCTTCTGAG
CTAGCCTCCATATTTACTGCTGTAATTACGTCCTAACTACACTTGGGCTTCTGACAAATT
CTAACAATATATGTCCTTCCAATACAGTCTAAACCTTCTCTTTGGAGCAACCAAGAATCT
CAGAACACAACAGGTTCAAGAAAATAGACTATTTCTCTTAAGTATGTCAACCTAGAAGAA
GAGCGTCTCCCACTAAGCAGGACCCTGCTTCTTCTTCCATAGTGAATGGGCTAAAAGGAG
AGCTTAGTCATGCTCCTTCTTATGGGACCTTAGTCTGGACCCAGAACCTACATAAAATAC
TGGCCATGATAGCATACCTGTAATTGAGGGTGCAGTGAAACCACCAAACTGGACCACTCC
ATGGGGAGAATGAAGGATTTTTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGGTT
GTCTGGGTTGATTGGGAACTAGTGCCTTTGCCTAAGGTAGTTGACTTTGAGAAAAGACTA
AAGGTGGTTCCTGGTAAACAAAATCTTCATTAGAAGACCTGATTTTCTAGTAAACAGAAA
CCTGCCTTTAAGCTTGTTTACCTGGTAACAGTCCTACTGCTTACCTTCTGTACAACAGTG
TCATCAACACTGCCATTTTGGGGTGCCACTTTGGACCTAACATTTGTAACCCAAGCACTG
GGTAGGCAGAAACAGAAAGATCCCTGAGGCTTACTACCAGCCAATTTTGCTAGCCTACTT
GGTAAGCTCCAGGTCTGGGGGACCTACCTCAAAAATAAATATATAAATAAATAAACCAAC
ACAATAATATGGATGGCACAGCCTGGGGATGGAGAAATGATACTCAGTGTTGACTTCTGC
TCTCAACAAGCATACAATCAAATGAACTTACACACACACACACGACAACAGGGAAAACTA
GCGTGACGGCGCAAGTCTGTAATCCCAGTATTTGGAAACTGGAGGTGCCTTACTTAGGGT
TTCTATCATGTTCAAGAGATGCCATGACTGAGGCAACTCTTATAAAGAAAACCATTTAAG
TGGAAGAGGCTTACAGTTTCAATGGTTTAGTCCTTGATCATCATGGTAAGAAGCATGGCA
GCATCCAGGCAAACATAGTACTAAAGAGGTAGCTGAGAGTTCTACATCTTGATCCGAAGG
CAGCAGAAGGAGACTGGATTCTATACTTGAGCATAAGAGACCTCAAAGCCCACCCTCACA
GGATACGTTTACTCCAACAAGGCCACACCTCCTAGTAGTGCTATTTCCCATGGGCCAAGC
ATTCAAACACATGACTCTATGGGGACCATACCTATTCAAACCATCATAGGAGGCACAAGG
ATTAAGAGTACAAGGCTGGCCTCAGCTATACAGTGGGTTTGAGTCTAGCCTGAGCTACAT
GAGCTCTGTATCCAAACCAGAAAACAATAAAAACCCTATGAAAGAATCAACACACAAAAG
CATTTTTCATCTAGCATGGATTAGGAAGTTGATAGTTATCTAAGGACATGTATACATACT
ATTTCCCTAATGAAAACTTTTTTTTCTTGACCACCAGTGTCAGTGTTTGGCTGTTTTACT
TTACTATGCATTTATATTATGACTACTCATAGATTCTACTAGAAGCTTCCTTGGTTTATG
AGGTAGCTAACTGTATCCACCACAGACCAAGCATCAGTGGGATCATGCACGTGGAGGACT
TGGGCTTTCTGAAGAAGAAAAGGCCAGTGACTCTGAGAAGGTGCTCAAGAGCCAACAAGT
GCCTGCCTGGCATTTGGCTGTCACCTCTATTCTTTATTAAACTGCAAATACAGCAAAGGT
ATTCTGGCATGCTCACACAGATAAGGTTTCACTTCCCTCAGTAGAGAGACACCCTTATAA
ATGAATAAACAAAAGGCTTAAGTGACAATTACATTTGCATACTTATAACCAAGTGGCTTC
ATAGACGGCCTGTCTTCAGAAGATACAAAGCTGTCTGAAGAATTTAATTAATTGCATGGA
TTATTTTACTGAATTTTTAAGGGGAAGATGAAATAAGAATAGCCTTCATTACAAAGCAGG
AGGCTCCTGTTAGCTCTGTGTGCTTTATTTTTAACCTTCACTCCAACCGCTTTTCAAAGT
TTTGTAGGTGAAGAAACTCAGGCTCAGAAAGAGGCCCAAACAAATAGCTACGAAGGTTCA
AGGTCCCAGCTGTACACAACGCCCAAAAGAAACTNAGATAAAAGCTGGGGGCAGACCTGA
CTCAGATAAATGCCTCAGTTCCTCAACACTGACTTTGTTGTTTGGATCTGAGTGGAACAC
AGAATGGCATGATTTGGGTAAAAGGTAAAACCACCTCACTTCAGGGTCCTTCTTAAGAGG
CAAGCATGTGCCTTCCACCATTCCTTCACCTCCTGTTTGCTCACTAGCAGAGCCACCAGG
TTCTAATTGGGCCTATCGTCCCAGGTGATAATGACTAGATGTGGCCATGTGATGAAGTGA
CAATCCCAGAAGGGAGGTGTGGCTGTGTACAGCTCCAAAGTCATGACTCAATCCCTCCTT
CTCCACTCCCGATGACTGACCATGAGAAACAGAGGTCTATGAGAAGCGGAGCTCAGCAGC
CAATACATTCTCAAGACACAGCTACAGGAAGGGCATCATTAAACAGCCTCCTCCCCTTTG
TAAAGAGGATGACTGTTCTTCAGTCTCTCCAAGCTAGACTGGGTCCCCAGTGAGCTCATA
CACCATGAACTTTGACTGGCAACTTTCTAAAGGTATGCTTCTTCTGTCTCGAGAACATTG
GAATTAAAGGTGTGCCCCACCACCACCTAGCTGGAAGATTTATTATTTTTATGTGTGTGT
ATGTGCATGGCTGCATGAGTTTATGGGTACCATGTGAGTACAGATCCTCATGTAGACCAG
AGAAATCAGAAGTCCTGGAA
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