SelenoDB
Release 2.0
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Promoter Report for SPR00002545_2.0
Identity
PromoterSelenocysteine synthase (SecS)
SpeciesSus scrofa (Pig)
Promoter IDSPR00002545
Promoter release2.0
External IDNone
Transcript SPT00002480_2.0
Annotation
Prediction method(s)
Promoter prediction (5000bp upstream, N/A) [Report annotation error]
OrientationReverse
Structure gene structure

FeatureCol PromoterCol Coding exonCol Non coding exon (UTR)Col IntronCol SECIS
ResidueCol SecCol Cys or Other

ToolboxForward   Reverse    
Sequence
>SPR00002545_2.0 # Promoter # Selenocysteine synthase (SecS) # Pig (Sus scrofa) Full length # Reverse
CCTAGGGGAAAAAAAAATGCTTATCACTTAATTTTTAAGAAATCATCATTCCCTAGAACC
CTACTTCAACGAATTTTAAAACTTGTTCATGTATATTTTGCCATGCTCCTTGCTTTCTAA
ACTCCAAGCATAAATTCAGCACTATGAAAAAATCTGGAATAAGCAAAACCTTTGTCTTAC
TCTGTTTAATTACCTACAGATCGCTGTGTGAAGAGATGACAAATGCATACAATGAAACTT
ACTCAGGTTTAAGGTTTCAGGAAAAGTAACTGAAAACCAATAAACTTTACCTCCAACTAG
GATTCTTCAAACCAGGGTGTTAGAACTAGAGTTGTCAAACTTTAGCGACATTAAAATTCA
CGACACTAGCAAGAACGACGCCTGTGAAGTTGCACGACAACACCTGACTCACGTTAGTGT
ACCGTGGTTTACAAACGCTATGTGTTTACTGAGTCCTTTGGAGCAGTGACACGTGGAAGA
TGCGAACTTTGCCCCATCCGCAAAGAGAAAAGCAAACGATATGGGCCTTCCCCTCCTTTC
CGCTTCCCAAAATTAGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCAGC
AAAGGTCATGCCACACTGCGACAGACTCGGGACAGGGCTCAAACAGCAAATACAAGGCAG
TGAGGTAGGACTAACAGGGGCACGGGGCGGAGCCGGAGCCTGGGGGGCGCGGCGGCTGCG
GAGGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGCCGCGAAGCTTTCAC
GGTTCATGCCCGCGGTGGCGACCCTGTCCGAAGAACAACTGACACGCTCCGGAACCGGGA
GGTGACTCGCCGCCTAGACGGTACGGGAAGACCTTGGGACAAATATCTTCGGCTCGTTCT
CGTACATGCGTAAACCGCTCAAATGGTCCGCCAGAGCCGAGAGCATTTGAGCATGCGCAA
AGGTGTCGGGGCTTTATCCGGCCCAACACAAATTAGCCCCGCCTCCTTGCATCTGATTGG
TCCAATTAAACCCTATTGTGCCTGAGACCGGCTGGAAGGGGACGTTGCACCTGTGTGGAA
GAGCCTTGGAGAGTCTGGGGCAAGTGCGTGAGCTTCTCTTGAAGAAAAAATTTCCTAAGT
TACTCTGTTTTACTCCGTTCCTGTCTTGCTGAATGGTGAGATCTGTGAGTCGGTGCTTCA
GCCTTACTCAGACCCTATTCCTCAGACTCCAGAACCTTTCATCCTTACCTTCATCCATGT
CAGCATTTACAGTTGCCTGGCAACCCCATTTGAAATACCTGTACCTCACTTCTTTTCTCC
ATTGCACTGCAGCATTTGTGACCATAGCACATCACACACCACCTCATATAACAGGCAGAC
ACACACACACACACCCCTATGAATGTAAACTCTAAAAGTTAAGGCCTTGGTTTTTGTTGC
TGTACTCCCCAGACACCTAGAAAAGTGCCCAGTATATAGTAGGGGCTTAAAAATATTTAT
ATTGAGTTAATGAATTACTTTGACTGCTCAACAACCCGGCACTAGTTGCCTGAGATACAG
AAATGAAAAGGCAGGATTCCTGTCTTCGATTTCCTTGCAATCTTCACCTTAGACGAGCCT
GCAGTAATTCCTAACATCACTCTTATCCAAAAAGAGAGCTAGAGCCCACTTGCACTGGTT
CGTAATTGCTTGCAAGAGCTGATTAAGTGTTCAGTAATTTTGTGAGCTGGCTTTTATTTN
GCTTTTAAATACAGCTGCTCTTTGAAAAAAATTCTGTAAGTTTACAATTGTCAATTATAT
GAAAAGCACAGGTAAATACTCAAACTCATGATTTCCTAATTATGTCACTACGTTTTCGTA
TTATCTCTGCTCTTGAGATTATTTACAGCTATCGTATCTATAAGGTGGAAATAAGATATA
ATGGTGTCCTACTGCACATCTCTTTCCAATTCCCTTTTTGGTGGGATCGTGCTGATAGTT
TTAAACTGGCCATGGTGGGCGTATTTACACCATGGAATCAGCAAACTCTTACAAGCAGGC
CCTTACCTCCCCACCCCTTACACCCCTAGGACTCATTTGTTTAACATGTACCTACTCCCC
ACTGTTCCTACTGCACTTATCAGCCATGTTACCTGTCAAATTGCATTTCAGTCATTAATA
ATTCTGTCTTCCTCACCTGGACTGTGAGCTCCTGGTTGACAAGGGCTCTATTTGACATCT
GTGTTCAAAGCACAGCATTGCACACCATTGACCAGGTGTTCTATGTGCTGCTTCCCCTCG
CCCACAGCCTCCAATCAGAGCACACCTGAACGCGTCCTCTTTTTCACCATAAAGCTTTTC
CACTCCCTGCCTGCCTTTGAGTTTGCCAAATGCATGTGACTAACTCTCTTGCACTAGCAA
GCTCTGAATAGATAGTCTGTTTGAATGGTCTTCATTCATTTACAGCTTTCCTGGAGACTC
CAGTAAGACACAGTCTGCATTATCACCATGGATGCCAGCCTTCAACCATTTGAGGTGTTC
ACAGAGGCCCTGGTGCCTTGCTGATTGTTGCTGTAGAGTCTGTGCCAACATGGTAAGTCA
GTGCTGAGTCTGAGCTCCTCTATCTTTGCATTGAGTTCCTCGAATATTTATTCTAAATTT
GGTACCCAGGTTTTATTATTGGTTCCCATATGTTTGACATCCTTGGTGGAATCAGACCAT
TCATTTCCATGAGTTTGTGTTCCCTTTTGTGCTTCTGTCTTGCATCGTGCTGTTGGAAAG
TGTTGTCATAAGAGAATCGTAGAGTAGAACACAGGCAAACACTGTCGTTTGAGCCAGCCT
CATAGACTAATGAGTTTGCAGTTCTTACCAGACTGGCACCCATTTGGACAAACTTTGTTC
TGAGTCACCAGTAAAGCTGGATGAGCTTCTCCTTTCATCTTTATTTTTTTGTCCTGAGAG
TTTGACTTTGACCTAGAGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCA
AGGGGCACAGATTGTTGGGCCTGTGTTCAGAGGGGTCTTGAAACATGAAGAGAACAAATA
TCACTTTCAACCAACCATTGTCAGCTTCCCTGAATTTGTCTAAGCCTAAAACCTCTCCTC
CACCAGGAAAAATGTCTGCTTCTTATGTGTATTCTCATTACAAACCTAATTCTGGTGCCT
AGTTCTTTAAATGGCGTAACCTCAGCAGTGAAGATTTGGGTCTTTAGTGGTCACTCCAAG
GAACATTTGACTTGAATTCATTTTTTAATTTGATAGGCACCTTAGAAAAGAAGTGTTCTG
AGGGTATTGTAATCAATAGAGTGGCCCATGAACTTACTAGAAGGCAGAATCTTGAGCCTC
TCCCCAGGCTTATTAAATCAGAACTTCCGTTTTAACAAGCTTCCCTGTGATTCACATGCA
CGTTAAATTTGGGGAAATGCTGTTCCAAAGGTGCTTGTATTGTCTCAAAAAAGAGAATAA
AACTACCAATTGATACTAGGTTTTCACAAATCTAGAATTTATTTTATAATCTCTAGGGTA
ACCAATAAAGAAATAGTTTTAAAAAAGTGTGATTTTCAATCTAACACAGGGAAAAAGTGA
AATAATAACAACAACAAAAAATCAGTTCAAAATAAGGCAAGAAAGAGTGAAAAACAGAAC
AGCCAGGACAACATGGAAACCATATTAAATATAAGTGAGGTTAGGAGTCCCTGTCATGGC
TCAGTGGTTAACAAATCTGACTAGCATCCATGAGGACGCAGGTTCGATCCCTGGCCTTGC
TCAGTGGGTTAATGATCTGGTGTTGCCGTGAGCTGTGGTGTAGGTCGAAGATGTGGCTTG
GATCCTGCATTGCTATGGCTATGGTGTAGGCCAGCAGATACAGCTCTGATTCGACCCCTG
GCCTGGGAACCTCCATATGCTGCAGGTGCGGCCCTAAAAAACAACAACAAAAAAAGAAAA
CAAACAACAACAAAAAAAAACAGCAACAACAAAAAAATATGTGAGGTTAATATTCCCTTT
CAAAGGTAATAATTATCAGACTAGATTTTTAAAACAATTATATGCTTTGTGAGGAGAACA
CATCTAAAACCAAAGGTTATATAAAGACTGAAAATTGAAAGGAAAAGACTGGAAAGAGAT
ATAACATACAAATACTAATGAAAAGAAAGCTGCCGTAGATTTTTAATATTGGGTAAAGTA
GACTTTAAGGCAAACGGCATTCTAAACATATAGGAACATACTTCATATTGATAAAAATAT
TCAATTCGTCAGGAAAATAATTCTAAATTTGTGTATACCTAATAACATAATTTAAAAATA
CATAAGTCAAAACTGATCAAAGGAAGAATAGATAAATCTGTAGTTATTCTGGGATGTTAC
AAAACACCTTTTAGGAACTGATAGAACAAAAATTAGTAAAGATAAACCCCATGTTTAATA
AACTTGACCTAATGGACATGCATAGAGTCTCTATATCCAGTAACTGCAGGACCACCCATT
CTTTTCAAGGTCACATGGAACATTTACCAGAATTGACTATATCCTGGGTCATAAAATAAG
TCACAACAAATTTCAAAGCAGTAAAACCAAGCAGAGCACATCCTCTGATACAATGCAACT
AAGCTAAGAATCAATAACAAAAACAAGGCTATTGGGAAATTAAGCAATATCTAAGTAATC
CATATCACAGAAGATGGTATAATAGAAATTAGGAAGTATTTTGAATCGAATGATAATAAA
AATACCACATATCAAGATTTATGGGAAGCAGGGCAAACATACTTAGGGAGAAACATGAGT
TTAAAAGCAAAAGGGAGAAT
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