SelenoDB
Release 2.0
Chart Advanced
Promoter Report for SPR00002588_2.0
Identity
PromoterSelenocysteine synthase (SecS)
SpeciesTaeniopygia guttata (Zebra Finch)
Promoter IDSPR00002588
Promoter release2.0
External IDNone
Transcript SPT00002523_2.0
Annotation
Prediction method(s)
Promoter prediction (5000bp upstream, N/A) [Report annotation error]
OrientationForward
Structure gene structure

FeatureCol PromoterCol Coding exonCol Non coding exon (UTR)Col IntronCol SECIS
ResidueCol SecCol Cys or Other

Toolbox
Sequence
>SPR00002588_2.0 # Promoter # Selenocysteine synthase (SecS) # Zebra Finch (Taeniopygia guttata) Full length # Forward
AAGTTTCAAACAACATGACAGAAATAAAGCAAGGCCCAACAAAACAGCAGACAGAGAACG
GAGAGAAGGGACAGTGGAGACGCTCATGAAGATGTAAAGGAGTCCGTGCAGCCCTGCACG
CAGGGACAAAGCAGTGGAATTTCTACCCGTTTGCAGCATCTTCCCTTCATTATCAGCCAG
CGAGCCCATATGTCTAGAGAGGTCAACACCTCCCTGCCTGTCACCGACGCTGTGCCATCG
GACACGGCAGATCGAGCGCCCTTCAGTCCCGACAGGTATTTTCGTAGCCTCGCTGGCAGG
ACAGATCTGGCTGGGCCGCCTGTGCCCCCAGACCCGCGGCCGCTCTCCCTAGGCACAGTG
GCGCTGCCGCTGCCCTCTGTGGCCCCGGTCCGTACCTGCGTTGGCGCGCCGCTCCCTGTC
CCCATGCGGCGCCCGCTCGCCGTGCGCGGGCCTCTGTCCGGCCTCCCTCAGGATCGGTTC
GTCCTTTCCCTCTCCCTTTCTGTGGCCGAAGTTCTTCTGATTCCNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNAGATGTGTGCTCGGCCGACAACAGTCGTCTCCTCTG
AAAGAGCAGGGAGATCAGGGCAACCTTTTCACCCTTTGTCTGGAAGCCAAAGCAAGGGAA
AGGTATGTATTCTCAGTGCAAAAAAAATCCAAACTATTTATTATGTTCCTGGTTGTATGC
CATTAGCAAGCAAGATGATCAGTTCCAGAGAGTATCGGTGCAATATGAATAGTGAAGACC
CAAGTTAATTGTCCGTCACGCGCCCGCCCCGCCACCTGCCTTAAAGGGGCCGCGGCTGCG
GCTCCGGAGGCGGTGTCAGGCCCGCGCCGGGCGGAGCTCGGGCGGCAGCTTTGGGCGCTG
GACGTCTGACAAAAACTTCCCTGACACTCGCCTTAGTTCTACACCTGCAGCACGCTTGCC
ATAGCCAGCTGCTCTCCCTCCCCAGACTTTGCACAACTTTGTTCTATACCATCACGGTAA
CTACCAAAACGAAACCTAAACACAGCATAAGAGAAAACAGTATGAATACACTGCCATTAT
TTCCATGTTCCCCCACTATCCATGCGTTATTAACTGAAGAAAGCAAATACAACTATAACC
CCAACATACTGCTTCAGATTTCAGCCTGGATGTATTCTCCCAAACTTGCCTATTGAAGAG
GGATTTTCCTCAAATTTTGGTGAAATATGGGAAAAAGATACATGCATTAAATACTTGCAT
AGAACTGAGATTACAGATTATACTGGGAGCAAATCAGTCCTCAGCTAAAAATAATAATTG
TATATATTTATTACTCAGTCTCATAGTTAAGAGCATGGTATAAGAATTTAACATGTGCAT
AATCTGGATTACAGGGGAAAAAATCATTTTTCTTGGTTACTGACAAAATATAACCTTACT
GAAATACTGGACTTGTGTTTGTTTTGTCTAGGGTTGCCTGTCAGCCAGTGGACTTTGGAA
TTAAGCTGAGTGTTATTTACCTGTGTAACTACTAATATCTGTAATATTTGATAAAATCTG
TTCACACTTGCATTTCTGTTCCTATTCCTTTCTACTAAAAGTGAACTCAACTGTGACTCC
AGATGAATACCCATTAGTTGCCTGGTAAACACATATAGGAAGGTTACAGCAACTAGATGT
AGTTTTCCGTACAGAAATATAAATGGACGTTAATTTCTTTGAGAAGCAAACAAAAAGATC
AAACTAAAAGGGAGAAGTCTAATATTTTTCCCAGCATACTGTAAAGTAATACTGCACCTC
CCTTTAGCTACAAGTGTGTTGTGGCTGTTTCAATAAGGTTCCATTGTACAGTCGATTCAC
TAGCTTCTAAAAGATTGAGAGTTAATGCTTTTGAAAAAAATAAGAAATAACTCTTTAGCT
ATTTCATAAAAAGGCCTGGGTTAGAAGGGACCTTAGAGATTTTCCTTAAAGCTATTTCTA
ACTCCCCTGCTATGGACAAAGCTACCTTCCACTAAACCAAGTGGCTTAGACTTCTATTGA
ACCTGGCCTTACACCTTTGGAGAGACAGGACATTCACAACTTCTGTGAGCACTCTGTTCC
AGTGTCTCACCAGCCTCACAGCAAAAAAAAAAAGCTTTTAAACCCTTCCTTTTTTTCTGA
TTTATGCGTTCATCTACACATACTACTGTGTTTTTAAATGCAATTAACTGATATTTTTCA
TCTTCTGCTTCAATAAGAATTCTGTAACTTGCTCACAGGTCTTGATCTAACAAAGCCTTT
ACATTGCCTCACTCTTCAGAACTGCAGAGTTCAGACACCACGAGAACTCATAATTAAAAA
AGAAATACACACTACTATCATAGTAATTAACAAACCACTAATTTTAATTCCAAATAGCTA
ATACTTTTCAATTAGCCACCCGGATTAAAATTCCTAAGAATTACATCACGCAAATAAACT
GGGTCATTTTCCTCATGCTAAAGCTTTTGTCCCTATCCTTCTAACCAACAGAGCAAATTT
TGTCATCTGCTTAGATGTATTTGAGCACTATGCCGAAACACTGGAGCGGGATAAAAAGGA
AAAAAGAGGGATACCCGCACAATCGTGCGCTCACGCTTGAGGCGAGCGCCCTCTTGTGAC
ACAGACCAGGAGGAGCAGCTGCTCCGCGACACCCAGCAGCGCCGCTGGCTGCGGGCCCCG
CCACGGGAGAGTTAAACTTGTACAGCTCTCTTCTACTCAAAGGGCTCAGAAACGCTGTTA
ATTACAGTACGAGCAAGCAGTTCAAACAGGTGTGTAAGATTACTCTGGCAAAACGCTCAA
AAGAGCCTAATCAGGCTAACTAAATTTACAGAAGCGGGATGGTCGGTCCGTACACTTCAC
ACGCTAGTTAGATGTCTGAGCTTAAAACTGTAAAACAGAAGAATCAAGGTAAGATTCCAT
AAACAGATTCAGTTGACCAGATACAGGCTGGTAATAATTAAACATTGGAACAAACACACC
GCGTACTTAACGCGCCTCTTCAATTTTTTTATACTCCCTACCAATTATTTCAATGAGGCA
AATGGGAACCTGCCGGTCCCCGTGGCCGCCGGGGGACAAAGGACAGCGACGGCGGCCGCT
GCCCGTGCTCCAGGGAAGCTTCAACCTGCTGAGGCTTTACTGGCATTCCTAGCTAAGGTG
CAAAACCTGGCCCAGGTCTCCTGCTGGTGTAATTGTTTTTCCCCAAGCTGTGTTTAAAAA
AAAAAAAAAAAAATAAAAAGGTCTTGTTGAGTAATATGTCTTTGTCCGCTGATGCAGTTT
TGGGCTACGCCTGCAGCCCTAGCAGGCTGCTCCTATTCCCTGAGGATCGTCCTACAAGCA
CCTGCTGTGCCCCCCGGCACGTCCCGAGGAGCAGAGAACGCCCTCACCCCGGCGCAACAG
CGGGGAGGTAGGTGGCTGCTCCCGACAGCCTAAAGCTAAACTCTGCGGGACAAGGAAAAC
CAGCCCTCGAACAGGCTCTCGCCAGCCCAGCAGTCTGGGCTCTGGCGAGCTGCCCCTCAT
AGCGGGACACCGCCCGTGACAGGCCCCAAGCTCGGGCCCGCTCCCCTGCGGNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAATCTAAGATGGTATATCATTTCAATCTG
CATCTATCAGCAGTAACAAGCACTTCCGTGGGGAACGTGAGCAGAGGTGAACGCACCGCA
ATACACCCACAGCTTTTTGAGGAGGGCAGAGCCGCCCCGAGCAGCCGGGATGGAGGGAGG
AGGCTCCCCCGGGCCGGCCGGGAGCGGCGGCCCCGCGCAGCGCCGAGAGCGCGCAGGCCG
GGCGGGCTCTGCACTCTGCCCCTGGGCAGCGTCCGGCCGCGGCTCGGGACAGTCTGCCGT
GACCGCAGGGACTGACAGAGCCCCAGGGTGAAAGAGAAAATCACTGCCCTGGGTTGTGCG
TTTGCCGAAAAAGGCCCAGCGAACAGTTAAATAAATGTTTAAAAGCAGTAAGATATTAGC
ACATTGTTGCATTGAGTAAAAAGCGATACTTGTAAGGTGCCAAAACAGTGTATTTCATTG
TCTTCAGCGTATAAAAATCATTGTAGCAAATATTTCAGTACGTGAGCATCCTCAGTCATG
TCATCTACTGTTTCAAACTTAACTTTGGTACCACGCTTCAGAAGTAATTAGATGTACTGA
ATTGGCTGTTTTGTTACTGGGGCATGTGAAAAAGCCTCTGGACTTACAAAAAATCTCCAT
GGTTTTATGGGTCCCTTCTTTGAGAATCTTGTCTGTAATTTGCAAAGAGGGGTGCAGTTG
TTAATTCAGTGAAGAGTACAAGAAAGAGCGTGTTTCTGGTTGCAGGTTTTGACATATTTT
GTTTCCGTCCCTGTTAGATAATAACTGGAAAGGAAAATGGGTGGAGAGGAAGATGTATTA
CATTAAAACTGTATTTCCCTTCTGCTCATGTTTTTGGTTCTCTAATATCTGAATATCTTC
CCTTTTGTGCAGTTTTTGCTGTTGAGTCTTTGTAGTCATACATCATATCTAGAGAATACA
TCAAATAATCTGTAGCCTTTTAGGGAGTAATTAACATGTATGCCATGCAGTGGTTTTGTG
TGTACCATAGAGAACACTTGAAGGTAAAAAATATCCTGATTGTTTTTATGTCGGGATGTG
CTAATGTAATTGTATTTAACACATGGGAAAACTATTATTTCACTTTTCTCTGAATACAGC
TTCATAACATTAGATACTATAAAAGAGAATAATGAAAATACAAACTGCTGCTTAGCATGA
GAAAGAAGGGTAACAATAATCAAACAAGTTGCATAAAGTTTTGTTCATTTTTCATTTCCA
AATTTTGTATTTATATGATT
Chart Advanced