SelenoDB
Release 2.0
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Promoter Report for SPR00002617_2.0
Identity
PromotertRNA Sec 1 associated protein 1 (SECp43)
SpeciesTaeniopygia guttata (Zebra Finch)
Promoter IDSPR00002617
Promoter release2.0
External IDNone
Transcript SPT00002552_2.0
Annotation
Prediction method(s)
Promoter prediction (5000bp upstream, N/A) [Report annotation error]
OrientationReverse
Structure gene structure

FeatureCol PromoterCol Coding exonCol Non coding exon (UTR)Col IntronCol SECIS
ResidueCol SecCol Cys or Other

ToolboxForward   Reverse    
Sequence
>SPR00002617_2.0 # Promoter # tRNA Sec 1 associated protein 1 (SECp43) # Zebra Finch (Taeniopygia guttata) Full length # Reverse
TTCTGAACATACAACACAGAGGAGAAGAGACAGAAGTTATAAAGTTAAAACACATTTGAT
GAGGAAAACTGTATTTTAGATAAGTGGTAGGAAATTTGCTATAGTTGAAATACATAGAAC
AGTTTCTTTTTAAAGTATAAATATTAGCTACCAAAGAGAAGCTGGATGTTAGGGGATAAC
CTCTACTTACCATAAGTCAGGTCAACATAAGCACACAGAAAATGGTTTAGTTTACAGTTT
ACTTCCTATTTTCACTGACCATCAATTTGCCCGCCCAAGTTTAAACTACTGAAAACTGAA
ATTACAACACTTAAAAGAATAATGGATAAGAATTAAACTGCTTTTATTCTGCATAAATCA
CTATTTTTATTTCAAATGAACTCTAAAGGTTCTCTTATTGCTCCAAGTCAGACTTCCCAC
CTCTATTAGCATCACATAGCTGCACTACAGACTAGTGACCAAAGCCTGGGGAGGTGTAAT
TCCCTGAGGGATGGAATGAGATACATACACCACTCTGACTGAGTGCTGGAGCACTGCAGG
ATGAGGACCAAACCTTGTTTGTTGAGGGAAGGCTGAAGAGCCAACAGTGCCCTCTCCATT
TCTCTGATCAATATTCCCATACCGGTGGCAGCAATGGTGAGACTCTCAAAGGGAAAATTC
ACTCTGATATAGAAGGACCACAGCAACGCTTCAGTCCAAATGCGCTCAGAGAACAAACAG
AAACAGTTACCCTGTTAACCTGTTTCGAATGATTTTTACACTCAGTACAAGCTCTCCCAT
GGTGGCAAAGGCTCTTGAAACAAAGTTTTCATCCATATAGGGCTCCAGCTATAAAAGCAA
AAAAAGAATGAAAGTTAGATCAGAGCATCTACAAAAAAGAGAATATGTGTCAATGTCCCT
CTAATCAGTTAAAACATTATTGAGAATGATTTTACCCTTACACTTCAAAAAGAAGACTCA
TTTAAGAGGGTCGATGCCACTCAAAACCAGCAGGCATGCATGAACCAGGCTCAACAGTCT
GCAAAGTGGAACCCAAGAGACAGCATGAATTTCAGAGAACAGGGAGCTTCACAGAAGGAC
AAAAGCTACTCAGAAACATACAGCAACAAACTGAGCATTTGCTACAGGGAGCAGGGGAGA
AGGTGGCAGGCTCCTTCTCCAGGTGCAAGTGAAGGCTGGGCCAGCATTGTGGATACACAG
GTGTGGCATAACCCCGGATGGCATGTGGCAGGTGACACTGCCCCGTGGAGCTGTGGTAGG
GGTCTGCAGAGCTTTGTCTGCCTCGCACAACCCCGGAATACCAGGGCAGCACTTGGGGGA
AGCTCTGGAATCTTGTCCCATGGCAGCTCTACGCTTCATCCTGCCCATGGGAGCACTGAC
TTTGTTCATTTCACAAGGAAGGACCGCACTGTGCAGGTAAGAGTGCATGTGAACATGCTG
GAGAGCAGGTGTCTGTGTGGTGTAAGGGACTGACAAGTAGGAAATGGTACTGGAATTTGG
ATCAAATATACTATGAAGAGCCTGAGTGAACAGGACACCTCTGTGTATAANNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGGCGGTTCAGCGGGAGCGGCTGTGCACGGC
TGGCCGGCCAGTCTCGTGCAGTCCGACTGTCCCTACCGACGCGGCGACCGTCGTTCGTCA
CATCCCCGGTACACCAGTCCATCGGCCCCTCCCTCGGTCCCTCCCGCCGCCGCCCGGGCG
GTCCTCTCGTTCTTCGCGGCCCCGGCGGGCGGGGAGAGCGGCAACCCTGCTCCCGCAGCG
CCCCTGACGGCAGGAGGAGCGGCAGCCGCGGGAGGGAGCCGGGGCCGGAGGGCGGGGGTT
TGGGGCAATTTAGGGGGGATTTGGGACAACTGTAGCTACCCGGAAGGAGATTGGAGTGAG
ATGCGGACCGGTCTCTTCTAGAGTGAGAAGGCAAGCAGAGAGAGGGCAAGAGGAAATGGC
CTTAAACTGAGACAGGAGATTCAGCTATCAGGAAAAAAATGATAGCATATGCTGGGTTGG
GAGAGGCACACCGGGATCATTGAGACCAACACGTAGCCCTGCACAGGACATTCTCACTCT
GTGCCTGAGAGCATTGTCCAAACGCTCCTGGAGCTCTGGCAGTCTTGTGGTTATGACCAT
TGCCTGTGGGTCCTGCTCAGTGTCCCAGCACCCTCCGGGAAAAGAACCTTTTTCTGATAT
CCAACCTAACCCTTCCCTGACAGACCTTTATGCTGTGACGAGTACTTTGGTCATCTCTTC
AAGGCACCACTGCTCTCAGAGCTGGCACAGGGTTTACAAAGTCGGACAGTTTTTGACAAT
GTTGAAAGGCCAAAGACTTGTAGGGGTGGGTTTTTTTTTTGTGGTAGAGAGGTTTGTGAG
AGGCCATGATCCCAGCTACCCTCCACCCAATGGGGCAGCAGCTGCATCAGAAGCTTCGAA
TCTTAACCAAACTGGGGCTCTTACCTTAGACCACTGCCTCTTCATACAGATAGGAGGTCC
ATCCTTGGGATCATCAGCCTGAGACGTGGGGTTGGACTGGGTACGGTGTGATCCTCTTCT
CTTGTTACTTCAGCAGGCCTTTGACAGCGAGGGTGGTAATTCCTGGAGAAGATGAACCCC
TCATACCGACAGAGCAGAGACAAGGGATCCTGAGAACTGGTTGGTATTTTCGGCATCCCA
AGAGCCGGTTGGAATTTTAGCATCTCCCATCACGGGAGAGCCCTGTGCCCTTTTAGGGAA
CACCAGGCATGGACTGAATCCCTGGCAGTGGTTGTACAGGTGCTGCCGCACGCCATAAAT
CCAGCTCCTGGTGACAGGGACGCTTCAAAGTCTCCACGCTATTTTCGCCGCGGTTGTTCG
GGCTCCGGGCGAGCCGGGCGGTGCCTCCGCCGGTCGTATCCCGGCAGAGGGCAGCAAAAG
CCCGCTGGTGTCGGGTGGAGGTTTTCCGGTGCTGGCATTGGGTAGCTTTTTGTGATGGAG
CCAGTTCTGGAACTCCTTCCGAAGTGATGTGTTAGCGCTCACTCAAATCTTGCCCCACAA
CATCCCTCTTCCATGACTAAGACCGGGAACACACCGGGAGGAGAGGGGAGAATTCTTTGT
TCTGCTTTTCCCTGTGGACAGAGCAGGGCACGTTTAATCCTTCCTACATTCCTGCAGGAG
ACAGTGAGAATCCTTCACCCTCATTCTGAGCAGGATCTGCATCTCTCATCACGCAGACGC
ACGCCCAGTATTGGCTGCTCTAGAATATCAAGTCTTGGGGAGATGCAAGACACGAGATTA
ACAGTTTATGTGTTTTCTGAGTCCTTAGAGCACCCTCAGATCATTCTCCTCCAAGTTCCT
CCCTAACTAAAATCTAAAATCTAGCATGAAATCAGAAAGGCAGCAAGACCTGCAGTTGGT
AACTCAGCAGAACGAAGATTTTGGGTTGTCAAGTTGCACTTTTTGTGCCTTGGTGTCACT
GGCAACCTGGTCTCCTCCAAATTCACCCCCTTTGAAGCCCCTGCTGTGTCTGCCTTTCAG
ATGTCATCTCCCAGAATGGTTTTATGTTTCCAACATGGCAATTTATCCCCTGGTTAACTT
GGAGCTCCGCCCTGCAGAGCCCACAAAGCTGTCACTCATTCTCTGTTATTACTTACAAAA
GCCAGGAGTTCTAGGTCATTTGATGAAGTGAGTCTAGTGTCTTTAATAATCCTCTTCTGG
CTTTTTTCTTCCAACAGAGTAACACAAAACTTGTTTTTCCTAGGATAATCCATAGACATG
GATTTTGGGCAATGAAAATGCTGAAGGATGTGATTATGTTGGACCAGGAGAAGACAAGTT
TAAATTCAGTGTTATATCTGAAGTAACTGCTGTTTATGCACTTAACCTTGTGACAGAGTA
AAAACAGTGCCAGGAGCATATTGTGGAGATGTTGTTACGTGAAAAAGTGTTTATTCCCCT
TTAAAAATTTATGAACTTGCAAAGAAGCCATGCAAGGATGATGTGGCTGTTCCTCTGTCC
TGAGTGTGAGTGTCAGCAGTTAGCAGCCAAAACATATGTGTCCCTTGTTCCCTTTGCTGG
GACAGCAGGTATTTCTGAATCTAGGAACCTGGTCCTGAAAATTGCTGACTAAATTCTAAC
TAGTGTTTACTGGAATCCACTGGAGGGGTGATCCCTGAGACCACTTTTACCTGGTCTCTG
GGAACTGTAGCCTGTTGGAGGCCCCAGTCCTGGAGGCTTCAGAACTCTTTCAACTCTTGG
TAACTTTGGCATTAAGGGTCACTCAGTACCTCCTAGGAGGAGGCCCTGACTGCTTTCAAC
TTTTAAAATCAATGGTTTTGATCTTGACAATCTGGCCTGGAAGATTTTAATTTTACTGGT
TTTAGCTTGAACTTGAAACTGACTTAAATGGCGTTTGTGCCCTCAGTACTGGATATTACT
GTGTTAGAACCTTCCCTTTGCCGGTCTTGCAGATGCAAGTCAGTCCTTTTTCTTTAGGCA
ACTGTATGTAATGGACTGAGATCAGGGATTAATTTGGCCAGGGATAATTGAAATGATAAG
TAAAATAAACCAAAACAAAACATAAAGCAAAACTTTGAGTTTGGAATAGCTTCTGAGATT
CTGAAAGTAACTGAAGTAATCCAGAAGAAAATATGCCATGAAATCTGTTTTCCATTATTG
CATGAGATGGTATGACTTAAAATTTGATCAAATCTATTTTTTTCATGATGAAGTTAATGC
CACTTAAAGTGATGTAGAGATCTGGGGTCTTTTTCCATGTAGAATTACAAATTATTGTAG
ACTTGACATTCTCATTTGTTTCTTTATTGATGATTCACTGTCATGATCTCACAGCAAGTA
AAAATAATTTCTGATTGATTTCCAGCTGCCAGTAGAATTTTTGAAAGATGTTGTAGTAAA
AGCTCATTGATGTGTTTGTA
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