SelenoDB
Release 2.0
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Promoter Report for SPR00002638_2.0
Identity
PromoterSelenocysteine synthase (SecS)
SpeciesTakifugu rubripes (Fugu)
Promoter IDSPR00002638
Promoter release2.0
External IDNone
Transcript SPT00002573_2.0
Annotation
Prediction method(s)
Promoter prediction (5000bp upstream, N/A) [Report annotation error]
OrientationForward
Structure gene structure

FeatureCol PromoterCol Coding exonCol Non coding exon (UTR)Col IntronCol SECIS
ResidueCol SecCol Cys or Other

Toolbox
Sequence
>SPR00002638_2.0 # Promoter # Selenocysteine synthase (SecS) # Fugu (Takifugu rubripes) Full length # Forward
CTGAAAGACAACAAAATCCCTTTTTTAGCGATTGTAGGAATCTTTATTAGGTTTGAGTAT
TCCAATCACGTAGTCGGAAACCAAAACAAAGCTAATTTCCCAAAAATATCTTTGCCGCTG
CTGAAACTCTGCCACTGTCAACACGTGCTCATTCTTCCCATTTCTTGATTTTCTTTCTCT
TTTTTCTGCGTGAAAACAGGAAGGACGAGTAAGGCGAAGGATCCGGGGTAGCGGGGATTA
GCATGCAGGCTTGGCGTTGGTTGTGGGTTAGCAGGGTTGGCAACGGTTACCACCAACGAA
CATTTTTGCACTGTAAATGTTAAATTTTATTGGTGTTTCTGTAAGATTGACCAGAGGTGT
ACATATATACAGATACAAACTAACCATATAATCTATATGTGTAAAATGTCTCTTTATGTA
AAAACACAAAGTATATAATAAAACTAATAAAGAGAATTCAAATATGCAACCAGGTGTTGG
CTAACTGACTCTTCAGAGCTCTGTCGGTGGTTCGTCCACAGACTTCCTGTCGGGCTTTTT
TATGAGAGTTTTAGTGTCTGTGGCTGCTGCGAGTCGTCAGTCGTCCTTTTTATTCGCGGA
TAGACTCATTTTAGAATGAAACTTTGGACAAAACCTTTAAAAAGTCTTTAGAAATAGAGT
CAACAAGAGATGGTGAAATGAGAGAACCGCGGTGTCCTCCGGTCCAATATTCCCGCCATG
GCGCCTTCTGCCCGCAGCGCGTGAGGCTATGGCGCCCTCTAGTGGTCAGCGCCGATCTTC
CCCGTGACAGACCGGTCGAGCTCCTGGCGTGGAGATGCGGTGGTTGAGGACTCGCTGAAG
CCAGCTCCAGCTCTGCAACCTCCCTCCTGAGAGGACGGAGCTCGCTGGACTGGAATTCTG
ATGGAGGACCGAGGTGATAAAGGCTCCTTCCTCGTGACATCGTGTCTCCGGCTCACCTGC
GTCCTCTACACGTCCCTGGGTCGAGACACGTCTCCGCTCAGCTTCGACGGGACTTGATCA
AACCTGCAGGAACGACCTCTTCTGTTTTCAGAAGATGTGGGAAAGATGAATCAGATTCCC
GATAACTCGGATAAAGCTGTTTTTATCTGGAAACAAAAAGTTGTCACCATCAGACAAACC
TCTGATTTTAATTCTTGCCAATTCTTTTGTTTCTTCTGAAAACAAACCTCTGTTGTTATC
TGGGAAACATGGAGCCAGTCCAGGAAGGGCCCACTGACCCCGATTCTGGTTGATACAGGA
TTAGCTAACAAATCTCGAAAGGCTAACGTGAGGAAAATTCACGCAGCAACTTTTCTGGAA
GTCCCGTTGTTGGATACCAAAGAACAGGAAGTCGAACTCATCCGACCGTTCATTTATCCA
CAAGGAACACTCAGAACCAGGTTCCTCCAAAGGTTCTCGCTGATATCTTTGATATTTCTT
CCAAAATGATCCGACACACAAACAACTGAGAGTTTTTGTTGCTGAACTGTAGCTGGCACT
GAAGTAAAAACACATTCAGGTTCTGTATGTTAGCAGTTCACATAGCTATGCTAGGTTAAG
CTAAGCTAATTAATTGTGTTGGCAGAATCAGGAGTGAACAGTTGGATCTTTTAAATGTGA
GTCAGCATCAGTGTTTGAGGGGACTTTACATCCAACCAGCTCTGCCAGCAGTTGATGAGG
TCCATATGCTGGGGGGGGAGGGGGTCCAGCACCGAAAAACTGCCCCGTTCTGCTGTTTTG
TGGGAGCAGTTTTTCATGACTCTTCAGAACCGACGTCCTCGGCTGACCTGAGAGAAGCCG
TGACTCAGAGGAACGTCACCGCCGGTCCCACCTTCAAGGGCTCGTCGTGTGATTCAGAAT
CCACCGTTTATGTTGTGCGATGCACAAACGGTCGTCTGTTAGCGCTGATGATGCTAACTG
CTCCGGCCTCTGGGGGCTGGTGGATGCAGACGAAGCAGATGAAAGTATAAAGAAATAATC
TGGAAGCTGCCATCATTTCCTGAAGCTCAGCTCTTTGTCATTAGCATTTAGCGGCGGCGT
TGATCAGCATGTTGAAAAGCAGGGCCAGCAGGTCGAAGGGATATTTGAGAATCCGTGACA
CCATGATGAGAGTAAACACGTGCACGTGTACGTGTACGCAATGGAAACTGTGTCAGGGGT
GGAAACGGCGTTCGCTCTGTGGGAGTTGGCGGGCGCGGTCGACGCGTTCAGGCGTGAGTC
ACCGCTGTCGACGTCAAACGGGCCCTTTTCTAACGACACCAACAGAAAGAAAAGTTAGAT
TAGAGATGAGAGTCCGGATTGAATGGCACCAATCACAGGCAGGCCACTGCTAGCGCCCCC
TGGGGGGCGCCAGGCCGTCCTCTCGTTGACTGGAGGCGTGTCGGAGAGGCCACTTTAGCC
CGTTCATTCGTTCATCACGGACATGCTAGACAAGAGCGTATTCACCTGGAGGGGTCACCC
CAGAGGCACAGCCCTGTTCCGGTCCTGGAAGGGCCCCTTAGTGGTGCTGGACCAGAGTTC
GGGGCTTCGCCACAGGCCACCTGATGGGCGCTCTGCAGGGACCCTCTGTTGGACATCAGA
GGTTCCTACCGAGTGTTGGACATCTCACGAGCACGTGGGAACAGACTCAGCTGAAGGTTC
TGCTGAGTCTCAGCTGAAGGTTCTGCTGAGTCCGGCTCCTTTTCTGTGGGCTCCAGCAGG
ATGTCCTGCCTGGCCCTGGGACCCTGGACCAGGAGCTCGGATGGATCTTAGACTCAGTCT
TTGAAGAATGTCTGCCATCAGACCACGTGTCCTGCTGGAGACACTTTTCTCGTCTAGACC
GGCTTTGACTCATCCAGCGTGATTCACCGATGGACCAGATCCCAGCTGAGTGGACGGATC
TCCTGGTGAACTTCATCCACCACCAGCGCGCCTCGCGACTTCTGCGCCCTTCACCAGGAT
TTTGCTCCATTTCCGGAGGCGCGTTTGATCCGGAAGCGTCATCCGTGACGTCAGTCGGGA
ACTCCCCCCCGGGTGAAAGTCAGGCCGGGACGCACCGAGCAGACCCGCATCTCCGGCAGG
AGGGTGCGAGGTGCGACCGCGTGACGTCCGCAAACGCTCCACGTGCGTCAAGACGCGCGG
CGCAGAAGTGGCGGAGAGCGCGTAAGTCAACAGGTAGGAGACCGAGACAGGTGAGGGAGC
AGTTCCTGACCTGAGCACTCACACTTTCTATGAATGTTCCTGCTTTACCTGCGAGTTCTT
CTGGGTGGATGGAGCTGACCCAGAAGGTCCAGAGTGGATCCAGGAGAGAAGGCAAGATAC
TGGCATAGCGGCTGACTCTCACTCCCTGCTGTGCCACACACTTGCCGTCTCTCTGCCTCC
TTTTCCGCCCACATCTCTTCCACGACCTCCGCCCCTGCTGCTCTGGATTAAACAGAAGGT
TCGAGACGAATGAAGATCCAAGTTTCGACTGGGAAAAGGCTGAAACGGGAGATGAACGTG
GTTGGAGAGACGAGTTGTGTTGATCTTATGAAAACTTGAGGGTCAAACTGAGCATGAAAA
CTTTCCTGTTGATAATTGTATAGTATTGATCGACCTCTAAGTGTGAGGGGGTGTGTCATA
CGTGTGTCATACGTGTGTCATATATGTGTTTTAGGTGTGTGTGTGAGGCGACAGAACATC
GCAACATCACATTCTTGTGTTTGTGCGGCTCCATCCACAAAAGATCCGAAATAAACGGAA
ACTAAACACGGAAACAAGATGAATTCAAGAGCCTCGTTATTAACTTTTATTCAACCAAAA
ACATCGTTGCCTTCATTCTCTTTCTGCACATTTAAAAAAAAGGGGGTTTTATTTATTGAT
TTATTGTACTGAGACCTGGTGGATTTTATGATTTAAACTTCTGTCATTCAGTCATCAAAG
CTTAAATCCATCATAACAAATTAACTTAAAGGTGAGTTCCTGGTGTATAAAACAGATAAT
AATAGAATTAAAAGCCACATCGATAGAGACAGACGCGGGGATCACGTGAGCCGTCCCAGA
ACGTCATGACGTCACTGCGTCATGACGCAGTGCGTCAGCGGCTGCTCTGCGTGTCCTCGT
GTTTCCGGTCGTCTGGAGGCGCTTCGGCGGAGCTTCTCCTGGTCCAACTGCTCGGTGAGA
ACAGAGCTTCCGAATATCCTCCTGCTTCTATTCGCCGTCTCGTTCCCGTCCCAGATGCGT
TAGCATCCATGCTAACTGCCCCCCCGCTACACGAGCGGCTCCACCATTCGCTAAACTGTT
GAGTAAAATTGCTGATGTGTAAATATGTTTTTATAAAACAAAACCAGCCGCTCACCGAAC
CCTGTTGCATTTTCCATCCGATTTTCTCAGATAAAGACGGAACCACAGAATAATACCCCA
TGTTTTAGACTCGCTATTTCCCCCAGAAGTTTTCCCTCACTTTTGAAATGAAAAATTAGC
TGGAAAGTTGTCTTATTTTTCGCACACGAGTGTAAATGGGGAGGAGACGAATGCTCTAAA
CTCCAGTTCTTTCTATAAAATTCACAATGTTGACGTTTGTGGGCGACATTCGTTGAACTA
CATTTCCCAGAATCCCAGAATTTGCCGACGTTGCCTAAAGCCGGAAGTTATTTTACTCGT
TGAACTTGTGAACGTCCATGTATTATATTACGAAAAATAAAACTTAAAAAAAAAAAATGG
ACGGAAAAGTTCTAACAAACAAAAAAAGCTAGAGGTATTATTTAGTTTGATAATCCGGAA
ACTCCACATCCCAAAATCCAACACGGTTTTCTACGTTTATCCTTTACCAGCTAACTGCTG
GAGTGGTCTCCATGGCAACAGCAGGTTTTGTGATTCTGGTTAGTGTAGATCTTTTCCAAA
AGTTTAGAATTTTAGTGACATCCTGACTGGAGAATGGTGGATTTTCTGAAGGTGAAACCC
TCCCGTAACAGCTTTTTATTTTCCCAGGATTCCTTTTGGAGCGTCGACGTTTGATGTCAC
CCTGAAACTCTTTGGCAAAG
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