SelenoDB
Release 2.0
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Promoter Report for SPR00002839_2.0
Identity
PromotertRNA Sec 1 associated protein 1 (SECp43)
SpeciesTupaia belangeri (Tree Shrew)
Promoter IDSPR00002839
Promoter release2.0
External IDNone
Transcript SPT00002774_2.0
Annotation
Prediction method(s)
Promoter prediction (5000bp upstream, N/A) [Report annotation error]
OrientationForward
Structure gene structure

FeatureCol PromoterCol Coding exonCol Non coding exon (UTR)Col IntronCol SECIS
ResidueCol SecCol Cys or Other

Toolbox
Sequence
>SPR00002839_2.0 # Promoter # tRNA Sec 1 associated protein 1 (SECp43) # Tree Shrew (Tupaia belangeri) Full length # Forward
GTAGACACTCAGTAGGTGGAAGCTGAGCAGCAAAGTGATGAGGTGAAAGAAAAAGGATAA
GAAAACAGAGAAAGAGAACAAGAAAAAAAAAGAGAAAAATGATAATGCAAACAAAAAATT
ATTTATTTGTTAATTATAAAAAGCAAAAAATGAAATCACTATGTCTCAGCTCTCATGGTG
GACTCAATCTTCTGGCCTGCCTTTTTTTTGCCTAGATGGAAGGGGGAGAGAGGGGATTAT
TACCAAGATAAAGGAGGATTTCAGAGCCTGAGATAAACTTTACCTTAAAAAGTCTTTTAA
AAGAAAAATTTTAAAAATAAAAGAAAAGGCTGGGAACCAGCAGTTAGCATAATGGCTATG
TCGCTGGATTCCCACGTAGTCTACTGCGGTTCGCGTCCCGGACCCGGTGGCTTAGAACTC
ACGCCGGGCGCATGTGCGTGCATGCCCAAGATCCCTAGAGGAGAATGGAGGAGAAGGGAT
TGCGGCATGACCAGCCCCCTGGGGGGTGATTTCTCGCTTTCTGTTNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNGCGGCATGACCCTCCCCCCTGGGGGGTGATTTCTC
GCCTTCCTGTTTCTATGTCTCTCTCTGTTCGACTGGCGAGTGCACGCACCCTACAGCAAA
AAACCTCTCAAAAAAAAAAAAAAAAATAAGAAGGAAAAGTAATGGAAAAGGAAAAGGCAG
AGACAGAAAGCCAGAAAGAGACAGTGAGAAGGAGACAGGGGCTCTTCCAGGGTAGAGTCT
CAGCAGAATATGTTCATTGCTCTTATCTCTGAGATCACTAGGTCTCAGATCTCATGATGG
ACTCAGTCTTCTGGTCTGCTTTTTTACCCCAGGGTAGATTCTCAGCATAGCATCTTCATT
GCTCTTATCTCTGAAATCACTAGATTTTAGCTCTCATGGCAGACTAAGTCTTCTTTGACA
AATATTTATTGTGAGCCTAGGTGAAAGATTCATCTGGCCTGGATGCCGAGATTAAAATAA
TAATCAAAATACTTTCTCTGCTGGCAAGGAATTACAGACTAGTAGAGAAAGATTTCTGTA
AGCAGTCATTTGTCTCTACAGAATGGTGTGGAATTTGCAGTAGGCTTAGGCATGGGATGT
AGTGGGGACACAGATGAAGGCGTGTGATTCAGAGTTGGGGTGAAATAAAGCTGAGATCTA
CAGGAGATAAACTAATCTCAATGGATGAAGTGGAAGTGGAGTATGTCCCAGGCAGAGAAT
GGCATGTACAGAGGTCTGTAAGAAACAGTAGTGTGTTTGGGAATGTTAACGGATGGAAGA
GTGTCGAGCTGCGTTGTGAAGTCCTTGGTTCTTTGGGTCCAGATCACTAAAATTAGAGAT
CTGTCCCTAGGCACAAAATGAAACTGCAACCACGAATGAAGTAGATAGAAAAGAAGGTTT
AATAGGAAAGAAAGGAAAGGAAAGAAAGGAAGTACACCCAAAAGGATCTTGGGCTGGCGG
ATTGCCAGGTGGCAACCGTGCTTGGTACTAGTTAACTGTTATTTTTATTACTAGAGGTCA
TGAATATTCATTAGTGGGAGGCCCCTTACACTGCCTATGTCCTTCCTTTAAATTTGAATC
CACAGGTTCTTTTCCTGCACCTGCACATCTTCCTCACAGGTAGAGAATGAGAGACTTGAT
CACCTAATCGTGCATGGTGCCCAATGCGAGCCAGGTTGCCCCAATTAGACTGCCCAATTA
GTCCATTGCCCTAATGGGAATTGGGGCATTGACCAAAACGCTTGCTTAGGTCTTTCTGAT
AAGAGAAACATCTTCGAATCATCCCTGTGTACTTCCCTCAGGCCCCAAGGAAGGAAGATG
GCAAATTGCCTCGCCCTCCTGGCACCTGGAGCTAGATGAGCCTTTCGCTTTTCTCTTAGG
GCTGCCTGCTCACAGCTAACTAACTGCCTACCACAGGAACAGCAAATAATTTAATGGTAA
ACTATATGTAAATATTGGTAAAGACAATATCTTGTTTTCTAATGTGAATAGGACTTTATT
TATTTATTTATTTATTTATTTGGAGAGGTTTTCGCTATAGGGTGCGGGCGCTCGCCAGAA
AGAGAGAGACAGAGAGACAGAAAGCGAGAAATCACTCCCCGGAGGGGATGGCCATGCCGC
AATCCCTTCTCCTCCATTCTCCTCTTGGGATCTTGGGCACACACACACATGTGCCTGGCG
TGAGTTTTAAGCCACTGGGTCCGGGACATGAACCGCGGTCGCCTACATGGGAGTTCAGCG
ACATAACCATTACGCTAACTGCTGGTCCCAATAGGATTTTATTGTTAATTGATAGAGAAC
ATGTACACTTGCTAGAGAAAGAGAGAAAAAGGGAGGGAGAAGAAGAAAGCACACTCCAAT
GGGGCATGGTTATACCTCAACCCCTTCTCCTACATTTCTTCTTCCTGTCAGATTTTTTTA
ATAGGTTTTTTTTTTTTGCTCACTGGAGAAATAGAGACAGAGAGACAGAAAGCAAGGGTG
GTGGGGGGGATGGCCACACCACAGTCCCTTCTCCATTCTCCTCTCGGGATCTTGGACACA
CACACACATGCACCCAGTGTGAGTTTTAAGCCACTGGATCTGGGACTCGAACCGCATCAA
CTACATGGGAGTCCAGCGACATAACCATTATGCCATCTGCTTGCCCCCTTCTTGTCAGAA
TTTTGGTAACACACACACTCACTTACTTAGCAGGTGTTTCAAGTTCTTTGGAATGGATGG
TCATATGAGTTCCGGGATATTTAACCACTAGGCTATGGGGCTGACCCCTGAATTGGATTT
TAAAACATAGAAACAATAGAAGAAATCAAAAAAGGAGAAAAAAATATGAGTTTAGTTTCC
TAACATTACAAGCCACATTTCTAAATCATCATGAACACAATTAAAAATAAACAACAATCT
AGAAAGAAAAAATACTTTGAATATTTCAGTAATTTCTTTGATAGAAGATGTTATCTATTT
ATACATTTTAATATAATTATTCTTTAACCTAGTGCATAGCCCACAATGTTGTTGATTGAA
TAAATTAAAAGGATAAGAATCCTCAAAAGATACTGAAAAGCAATTAATAATTAAGAAAAT
CCTTGGGACCAGCAGTTAGCGTAATGGCTATGTCGCTGAACTCCCACGTAGTCGACTATG
GTTCGAGTCCCGGACCCAGTGGCTTAAAACTCACGCCGGGCGCATGTGCGTGCGTGCCCA
AGATCCCAAGAGGAGAATGGAGGAGAAGGGATTGCGGCGTGGCCATTCCCCCTGGGGATG
ATTTCTCCCTTTCTGTCTCTCTGTCTCTCTCTGTCTGTCTGGCGAGTGCATGCTCCCTTT
AACAAAATCCTCTCAAAAAAAAAAAAGAAAAAGAAAAACCTCTCCAAAAAAAGAAATAAA
AAAAGAAAACCCTTGTAAAACTTCAATAGATGGTCAAGGAAATATGAACAGACTTTTAAT
CTTGGGGTCATCCTTTGGCTCTTTCCTTTTTCTCACACGACATGTCAAATCCTTTAGCAG
ATCTTATTGGTTCTACCTTTAAAAGAAATTTACATGTGGATGTTCTTCCTTATCTGCCTA
CCATCACCTTAATCAAGCCATCATTGTATTTTGTCTGGGCTACTGCAAAAGCCTCCTAAC
TGTTCTTCCTGCTTGTCATCTATGCTTTTATAATATCAAGAGTAATATTTTAAAAGTAAA
ATCAGAACGTGTCACTTCTTTGTCTGGAATCCTTCAAGTCTCCCATCACATTCAGAAGAA
TAAAATTCCAAGTCTTTTCCATGCATGAGCCCCTTTATGATCCTGCTCTTGACTATTTCT
CAGCCTCGTTTCTACCACCATGCCCCTTCTTCTCACTCGACCAAGCATAAACAAACAGCC
ACTTATTCTTTGAGCATCTGANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NTTTAGGCCTCAAAGATTGCCATACTCTACCATATTCTCACAATAGAAAAGCACAGAACT
TGTTCCAGCCACAGTGCCAGTGGTAGCACAACACTCTACAATGCTAGAAGCCATGTGGGA
TATTGGGATTTGGTTTCCAGGTCAGTTTGTACCTGTCAACACACATACTTGTGCCTGTGA
TCCTGGCTGACTGAGAAGGCTTGGGTAGGGTCACAGATAGGAGACCAACTGAAGGTGTTT
GTCTTTCTCTCTCCTTCGGATCAAAGAAATAAATGAATAACATCTTTTTAAAAGTACAGA
ATTGTTGACAAACCATTAAGAGAAAGTATCAGACTCACAAAGTTAGACATTAAAATTTTT
TAATGAACAATATAAATATTTCTGAAATGGATAAAAATACTGAAAGTATAATATAAGAAA
AGAGACTATGGGGGACCAGCAGTTAACATAATGGCTATGTTGCTGAACTCCCATGTAGCC
AGCTGCGGTTCAAGTCCTGGGCCCAGTGGCTTAAATTCACACCAGGTGCGTGTGCATATG
TGCCCAAGATCTCGAGAGGAGAATGGAGAAGAAGGGATTGCGGCGTGGCCATTCCCCCTG
GGCGGGGGGAGGGAGGTGATTTCTCGCTTTCTATCTCTCTCTCTCTGTCTTTCTGGCAAG
CGCATGCACCCTATAGCAAAAACCTCTCCAAAAAAAAAAAAGAGAGAGAGAGAGACTATG
TAAAATGATCAGACAAATTAAAAAATCAGTCCAATGGAAATTTTACAAAGAAAAGCGTAT
CTTCAGAATGTCTAGACTAAAAAATAAAAGATAGTTAAAGAGAGTCTTAGTGTACTAGAA
GATGAATCTAAAGAAATTGCACACATTTCGGAGTTCCAGCCCAGCGGGGGGCATGGAGGC
CAGTCTGTGGATGGGGGAAA
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