SelenoDB
Release 2.0
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Promoter Report for SPR00003159_2.0
Identity
Promoter15 kDa selenoprotein (Sel15)
SpeciesIctalurus punctatus (Channel catfish)
Promoter IDSPR00003159
Promoter release2.0
External IDNone
Transcript SPT00003094_2.0
Annotation
Prediction method(s)
Promoter prediction (5000bp upstream, N/A) [Report annotation error]
OrientationForward
Structure gene structure

FeatureCol PromoterCol Coding exonCol Non coding exon (UTR)Col IntronCol SECIS
ResidueCol SecCol Cys or Other

Toolbox
Sequence
>SPR00003159_2.0 # Promoter # 15 kDa selenoprotein (Sel15) # Channel catfish (Ictalurus punctatus) Full length # Forward
CAGATGAGCAGCTGCTGCTGCTGAGTAATGAAGAGGCTATTGCTAATCATAGCACCTCAT
TTTCTTTCTGCTCTGTGTGCACACCAGGTGAAAGGGACAAAACGGTGCACAAGGACCTGT
CAATCAAACCTGGAGCACATGGACGATTTGGCTCAGGCCATTCTGGACTTGAGACTCAGG
GGGGTTTTGAGACTCAATCAGGACTCTGGAGGTTTGAGAGACTCTTTTTAGGCTATTGGG
ACCTGAAGCGACTCCTTCGATTAAATACTGAAGGGGCATGGCAGGCTTTGAACTATTTTA
GATTCTTGGAACAACTAAATGATTCTTTTAGATTTTGAGAACAACTAAATGACTATTTTA
GATTCTGGGAACCCTGAGGTGACTCTTTTAGATTCTGGGAGCCCCTAAATGACTCTTTTA
GATTCTGAGAGCCACTACATGACTCTTTTAGATTCTGGGAGCACCAAAATGACTATTTTA
GATTCTGGGAGCACCAAAATGACTATTTTAGATTCAGAGAGCCCCTAAATGACGCATTTA
GATTCTGGGAGCCAACTCTTTTAGACTTAGGCAGACCTAAGATGACTCTTTTCCTAGACT
TGGGAAGCCCCAAGGTTACTCGTTAGTCTGTTAGTCTTGGTGAGCACCGAGACAACTCTT
TTAGGTGCACAGAGTTCCAAGGTGAATCTTTAAGACTATGTAAGACTTGAGGTGACTTTT
TTTTTTTGACTCAGGGAGCCCTGAGGCCAATCTTTTAGATTCTGGGAACACTCAAGATGA
CTCTTTTAGATTCTGGGAGCCGCAAGGTGACGGGTATAGACTTGAGGAGCCATAAGGCAA
CTCTTTTTAGACTCAGGGAGACCCAAAGTGACTCTTTTAGATTCTGGGATCNNNNNNNNN
NNNNNNNNNNNAGGTTTGAGAGACTCTTTTTAGGCTATTGGGACCTGAAGCGACTCCTTC
GATTAAATACTGAAGGGGCATGGCAGGCTTTGAACTATTTTAGATTCTTGGAACAACTAA
ATGATTCTTTTAGATTTTGAGAACAACTAAATGACTATTTTAGATTCTGGGATCACCAAA
ATGACTATTTTAGATTCTGGGAGCACCAAAATGACTATTTTAGATTCAGAGAGCCCCTAA
ATGACGCATTTAGATTCTGGGAGCCAACTCTTTTAGACTTAGGCAGACCTAAGATGACTC
TTTTCCTAGACTTGGGAAGCCCCAAGGTTACTCGTTAGTCTGTTAGTCTTGGTGAGCACC
GAGACAACTCTTTTAGGTGCACAGAGTTCCAAGGTGAATCTTTAAGACTATGTAAGACTT
GAGGTGACTTTTTTTTTTTGACTCAGGGAGCCCTGAGGCCAATCTTTTAGATTCTGGGAA
CACTCAAGATGACTCTTTTAGATTCTGGGAGCCGCAAGGTGACGGGTATAGACTTGAGGA
GCCATAAGGCAACTCTTTTTAGACTCAGGGAGACCCAAAGTGACTCTTTTAGATTCTGGG
ATCCATTAAGTGACTCTTGTTACACTTGTTGAGCCCCAAGGAAACTATTTTACACTTTTG
GAGTTCCAAGATGACTCTTTTAGACTCAGGAGCCCCATGGCAACTCTTTTGGATACACGA
AGTGATTCTTTTAGACTCTGAAAGACCTGAGGTGACACTTTTGCAAAGATGTAAAATGCA
TGCAGTATTTTGTCCAACCCTCTTCTCAGACCCTGTTAGTTCTGCAGAGTTAACTGTACA
GGAAGAGGCCTCCTGACTGTTTGGAAACTTGAACCCATAAGTGCTCAAGAGCACAAGTGC
CAAAGTGACACGTGCTTTAGGTGTTAACGGCACTGGAGAGCCTAAATACAGCTCTGCATT
TCTGTAGAGTCCAATGAGATCGCTGGAGCTTCCTTTATCAAACACAATCTAAATAATAGG
CTCTAACCACGCAAAGAAAAACATGCGATGTGTACCTGATCACATGACCTCAAAGTCAAA
ACAGTTATCTAATTTAAATAATGATGTTCTAGTTTAAGCAGATGATGTGAGCGATTCATT
GAGTATAATTCCAACCTGCGGTAATGTCCGAATATTACATTTTTATACTGAAACATTATA
AACTCTTGGAATTACAAGATTCTCTCACATTTCTGTTATTTTAAAACGTTTTTAAGACAA
GATTTTGACCCTCAATAACTTTAACTATTATATTTTAACAGTCACATGTTAAAAACATGG
AACCTTATAATTCCTGCGATGTTTTAATCTTTTAATCACACTTTATATGTTCACTATATT
GTATTAAAAGAAATTGTAATTACTGTCTCCATTTAAAAAGCTGTAACAAGGATTTGATTG
CAGAAGTTGTTTTAAAACACAAAAATCATTCCTCCATTTAATAGTCTATTAAATCATTGA
ACTAATTAGTCTCCTTTCGAACTCAACTGGTTTATTTTTAGTTTACTGAGACTGAAATCC
AGTTGCTTGTAACACATTAATATGCAAATTAGTACAATAAATCCCAAACGCCAATCCCTA
GTTACAGTGTACTGCTTTTTAAGTTCTTTTATGGAGGAGATGGTAACGGCATCAAAATTT
GGTTTGTTTGTGCTCACTAATGTTTGATTGTTTGTTGAATTCACTGAGCACATGCACCGC
CTGTTGGGAAAGGTTTTCAAAAAAACAACAACAACTATTTCTCCTTGTATACTTTTGCCC
TGACTGAATACTAGGCTTATCAATCCCTCCAGGATTTTGTGAAATTAACACAAAATCTAA
TCAAGAAAACGCCACAATATTCACAGGAGCTCAGGAACAGATTTGGGCCAAGACGTGTCG
TGTGACATCATCACAACGTGCATTCTTCGATTCATGTGCGCCTACTAAAAGGTCTCATTT
ACCAACAAACATCAGTATGAAAGACCGTGCGAAATTATTTCATGCGATTGCGATTCAGCC
GATTCGACTAGTTTTCTGAAAAAGAAAAAGAAAAGAAAAAGAAAAAAAAAAAAACATTGA
AAAATTGTATTGCAATTTTTTTTTTTAAAGCCCCAGCAAAATAAAGCGTTTTTGGCCACA
ACAATCACAAAAAAAACTTCACGAAATCCTGTATGGACTGGATTATTGGTTTTTGGAATC
GCTTTCTTTCAGAGTCATTTCATTAAACTACTGTGTAACTGAAATAAATAAATACATAAA
TAATTTAAGTGATAGTGATAGTTACATCAGAAGCCGATCAGTCGAGGTTCTCGTTAAGTG
AGCCTCCTTCACACAACTCACAGCATCGAGTGTAAACTTGATGTTTGATAAACGAGCTGA
AAAAAATGTAACAGTGACGTAAAACGAGACGCGATTTTTGCGTCTAACTTCATTAACACG
TGTTTAATAAGCAAGATGACAGATAGTGGGTCTATTTCTGAAAGCCTGACAGTGGCTCTA
CAGTTACAGGCAGAACTGAGCTCTCAGCCCATCTTTGACTCCCACAGACCAGGATTAATG
ACATCCAAACAGCAAAGAGACAGAAATATCAATTTACTAAATGGCTTCAAAACCACTGTG
TGTGTGTTTTACAGTAAAGTACTAAGTGATGGTGTGGTATGATGAAGTGGAGTTACTGAT
ACCATCCTGAAGTTTCCTTTAACAGCAGTTTTATTCCTCATATACTTTATCCATTTATAG
TTGCATCTAACTTCTGCTGAAACAACTTAGTTCCTGTTCTCACTTACGTTACAGCAGCTA
TAAACAGTCGCTCCCTCACCCACCCTCTTTTTATTCTCTTTCTTCAAATGCAGGTTGCCA
TGTTCCAGAGAAACCATAAACTACAGCATAGGAGCTGCCCTAGAGCTGCTGTTCCAGAAA
ATTAATCGACACCTTTTGACCAATCAGAATCCAGAATTCAACAGCAGCGTAGTGCATTTT
ATTACCTTGTTGCTCACCTTGTAGGTGTTCAGTTACAATCTAAAACTTGTTTATTCCCCC
TAAGCAGTGTTTTGATTGCTTTCGAACCTTCATCAGGGTCAGCTTCTGACTACAGCACCA
CTCCTGGATGGAAATTCTGGTTCCTAGGCTGGTTCTCAACTCCTAGATAACATCTAATAA
CATGTACACATGTGCATTCTGGAAGATTTTCCTCCAAACATCATCATTATACATTTGATG
GATGTGGAAAGTGTCTTGATCATCAATGCACGGAGAAGAAACAGTTGTTGTTCCTCACCC
AGTTTGCCTCTGGATTCCTCCAGTTGGTGGATCTGGTTCTCCAGGAAGAGCATGGCCACT
GCGAAGGCCAGCAGCGCCAATAGCTGAAACTTCGGTGCCATCATGATCCTTAAACTCCCC
ATGAAATCAGACCAGCAGATGCAGAGATGAAGACATGATGAACTTCACTGCACGACCCGG
AAGCTGGTGAGAGCAGAACAGCTGAGATCTCGCAAAAGTCGCAACTCTCCGCTATTACTG
GCACTAATAATCCTCCTTCTGGACGTTTCTCTGAAAGTTTGGAACTCAATACATCCACTA
TAATCTCCTTTTCAGTTCTTGGCGTCGAGCTGGATTCTACAAGAAACAACAATTACAGCC
GCAGAAGGAGGAACAGCTTTTTATTTACCCTACTGTTGTATCCTCGGTCGCTCTGATGGT
TAGTTAATCTAGGCTCAATCCTAAAACGCGCTCCTGTTGGACACATAGTGCACTACGTAG
TAAGCAGAAACCGTTACGTCATCCCCTATGTAGTGCAGTTTTACAGGAAGTCAGGAGTCG
TTTGAGATTCAGCCTGTGCGGACAGTAAATTATCCTGATACGTTAAATTAGTAAGTTACT
AAATATAGAACTACGGTTGTATATGTAGAGTAAAGAAAAACACACCAAAGAAATCACAAC
TGCATATATGTGTTTCAAAGTTTTCAAAAATAATACTCTGCGTCGTAGTTTTGCTTTAAC
GTCCAGGTCAACGTCGAATTACTTCCGGCTGAGAACTTGTAACCACTTCCGCTCAGTTAG
GACGCGGAAGACGGAACGCG
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