SelenoDB
Release 2.0
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Promoter Report for SPR00003179_2.0
Identity
PromoterSelenoprotein H (SelH)
SpeciesNeotoma lepida (Desert woodrat)
Promoter IDSPR00003179
Promoter release2.0
External IDNone
Transcript SPT00003112_2.0
Annotation
Prediction method(s)
Promoter prediction (5000bp upstream, N/A) [Report annotation error]
OrientationReverse
Structure gene structure

FeatureCol PromoterCol Coding exonCol Non coding exon (UTR)Col IntronCol SECIS
ResidueCol SecCol Cys or Other

ToolboxForward   Reverse    
Sequence
>SPR00003179_2.0 # Promoter # Selenoprotein H (SelH) # Desert woodrat (Neotoma lepida) Full length # Reverse
ACCATAANAGAAAATAAGAAATTAGACAGAGCTAAATATTTTGCTAGTGCAATTGATAGT
GATCTAAGCTGAATTTATTTGCCTGCATCCTGTCTCATCCATCCCTAAGAAGCCAACTCT
TTGATAAACCTAAGGCTGGGATGTAATTACAGGAAGCTCTCCCTTTTTTNAGATCTCCAA
GAGTCCCAATTTCAGACCAGCACAGAACATGTTCTGACCCCTCTGGCTGTCCGTACTGGA
ATCCTAAGAAAGGCAGTAGAACTCTGACCAGCCATGAGACCCCCACATACACACCTGAAA
CAGACCACTACCTTACTCACATAACAAAGAAACTAAGCAAATTATATAAAAAAGCAAACA
AGGAAAGAAAATCTGTACAATTCATACTCATTTGTCATCATTTTCACCCCAAAATCAAAA
TAAAAAGCACAGCAAATAGTAATAATAGTAAAATAAAAGATTACTTATCTGTCCCTTTTC
CTATAATTCCTGAAGGAACCAGCAGAAGTGAAGTGAAAGACAATAATCTTCCATCTTATC
ACCTCAAAAGGCTCTGTACTACACGGCAGGCCAAACAATGCCTTAGTTTGGAAAACAGTC
CTGGACCCTAATGTTGTTCAACACCGNTACACAAAGCCCAGTTTCAAAGCCGGACCCAGA
TCACCACCAGTCATCCAGAACCTATTTTCAAACTGCCTTTGTACTCCTCCTTCAGACTCT
CATCTCTCCCCCTAAAGGTTGAGCGAGAAACCGACACTCTGGCAGCAACTGACTAACCCT
CCAAAGACCCACCAAGAAACCTCCCCAGAAAAGCATTTCAAAGGAAAACTGAAAAAATTG
GAAACGAGAACTATAGCCCAACTGACTGTACACATTGTCTTTTTTCTTTCTTTTCAACTA
CTTCTTTTAACTCTGAGGTCTAGATGTCAAATATTTTCCTGTAACCCTCGCCTAGATTAT
ATGGAAAGGAAAAGAGGAACAAAAGTTGTTTCCTCCAGAAGCCACAACCTCACAAGGACA
AAATCATCTTGCAAGGAATGTCTTCACTGTAAAAAAAAATTCAAGGAAGTGTTCCAGTCA
AAGAATGGGGGCAGGGACCAGGAAATCAGAAGATTAAAGATTCACATCAATTTAAAGACA
ATGAGCAGCTTACACATTAAGACCCATCCTGCTACAATTAGAGCATATCTATTTCAGCCC
TAATTTCCATACTGATTCCCATTTTAAAAGAATAGTACCCTATTTTGCAGCTACTGAGGA
GTTGGCTATATAATTATCTGGGATCAGTACATTTGCAAGAACGTATGTGCATAAAGCACA
ACCAAACAAATCTTAAGACCAATTATAAAACATGAAGCAGAGTCATAGGCCTTTATCTCT
AACTGTGTTCTAACTTACTGCTAAGTTAACCAAGCAAGCAAACAAACAAAAGACAACTCT
AAAAAGCACCTTTCCCGTGGTTTAAAAATAAAATTCCCTTTTGTGCTTTCTCAAATGAGT
TTTGCAAACTCTAGTTTTCATTAAGTGGTTTCTCTTCACCTGACCATTCACAACCCACGG
CCCTTTCTGAAACCAAAAGGGCTGAAAAGACTTTCAGGTGTTCTGCCGCTTTACTCTGGT
CAACAGAAAGCATGATTAGAATTCCTTAACCTTAAAGCACCAACATTATCATATTTGCAG
ATTTAACACACAACACCTTCACAAATCTCTGCCATCAAAAGTATTTTTAGGATAAAAAAA
AAAGTGGTGGCAATTCAGTTAACATAGATTCATTTGTTTTTCAGGGCAAAGCGAGAGGCT
CCTTCTAACAGGCAAGGCTCCCACCCACCACACCTGGAAAAGTAAGGGATCCACCCAGGA
ACAGCAGAGCTGAAATCCATCTGGGCCGTTCAAACTCTCAGGAGAAAAAAACAAACTATT
TAAGTTCTAAAGCTCCCTGCAACTTTCCACTGCCACAAATTCAAAGGTGAGGGGGCTGAA
GGTTTTGAAACATGGTAAAGAGCCATCTGTACAACTATCTTCCGACCAGGACAAATTCCT
TTCCCAACCCACACACAACATGCCAAAAAACCAACTTTTTGAGCTCTGAAAACAAAAGTA
TGTTAGCTTAACTCAGAAAAAATAAAACAGAATGAAATAAAAGTACACACAAAAATGTAA
TTTGCACAACTTCTACCCCTGGTTCTAAGCCAGCTTCCGGTATNAGGTCTAATACGTTTA
CCTTTTCGTTAATATAAATAAAATACNAAAATATGTCAAAGGTATTAAAAGCAGAAAAAA
AATAATTGATTAAAATTCACCGTCAGCATTAACAGGCTCTCCTGCCTTCTTAAATCCCTC
CAGTTACCCATTAAGACAAAATCCCATTTGGGTTATCCTTTTCCCAACTNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNC
TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC
TCTCTCTCTCTCTCTTCTCAGATCCAACACCTAAAATGGAAGTTGCACCCAGCCAAAGGC
AAGGGAGCCTGGGTGGTGACAAACTGATCTGGCAGCCCTACCCTAGCTTTCCTAAGTGAT
GTCAGCCCCTCCAAGCTTCCAATAGGAGCCACGCATAAATCAGGGAGCTGACCTTATCCA
ATAGGAAACTTTATTATAGGAAATTAAAAAAAAGAGAGAGAGAAAGACGAGGAAGTTTTA
TATATATATAAAATATATATATATTTATATTTAAAGAGGAGACTATACAGTCTCTGAGGA
ATTACTGCAGAGCTGGCGGTGGGGGAGGGAGGTGCTAACTAACAAAGCTTTTAAGAACGG
CACGCCTAAGCCCCAGTTCTCTTTGATGAGGGTCTTGCTCCCTTTCCCTACCTATCAGAG
TGGGAAAACAGAAAAGAGCTGACTTAATTTGCCTGCTGCTGTTTGGTTTGTTGCTTTCTT
CCCCAAAGCATTTTCCCAATGGAAGACAGGAAGGAAGGAGAGAGAAATCCCAGAAACAGG
ACTGTGTGTTAATTGGGATAGTAGGAAATATCTGAGGCAAACTCTCAAATTCATTGTTTT
GATTTCATTGCATTAGAGCTAATGAGGAAAAANAAATGCTTAGGCTTGTTAATAAGTTGT
TAGCCTCTTGCTCTAAACTAAAAAAAAAAAGCAGACTCCACAGAGCTGTTGAAGAAAACC
ACTATGGGTTTGCCTGGGACAAAAGACAGAATCCAATAAACAAAGACTTTAGAAGAGATA
AGAATATCGTTAAAATAATTAAGAGAATGCTTGTGAACCCAAAATTACCTGGTTTTTTTA
TTTGACCTAAATAAAACATTACGGGGATTTTCCTCTGAATTCATTTAAGATTTAGGAGGG
GAAAGGGTTTTGTTTGTTGTTGAGTTTTGTTTTTTTCTTGGATAAGGAGGTTGCTTTGTT
TTGTTTGAGACAGAGTCTCAGTGGCTGGCCTCAAACTCAAAATGCCTCTGCCTCTCCCTT
CTCAGTGATGGGAATGCTGGTATATACCACCTGGTAAGACTGGCACCAGTTATTCACTAG
TTACTAAACAAAGATGACGAATTAGAAGGTTTCTCTTTATATTTTTAAATTAAATTTATT
TGTGTGTATCTGTGCTTACATATGTACACACATATACCACAGCACCCATGTTCAGGTCAG
AGAACAATTTGCAGGAATCCGTTCTCTCCTTCCTCTATGTGGGTCCAGGGGATCAAACTT
AGGTCATAAGGCTTGGCAGCAAGCACTTTTACCCACTAACACCTCTTGCTGGCCCTTCTT
ATTTATTTTTTGAGACAGGGTCTCACTATATAGCCATGGCTGTCTTGGAATTCTTGATAT
GTACATCAGACTGGCCTTGAACTCACAGAGATGCCCCTGTCTCAGCCTCCTGAGTGCTGG
AATAAAAGGTATGTGTTCCTACTGGGTACTGCAAAATGAATCTTCATAAAGCTTTCATAA
TCTATAATGGTGGTACAATGGCTAAGAAAAGAGACTGCAGTCCAACTGCTGGCTTTCAGC
TACTCCTATACAAGTACACTAAGTCAGTGTCTGCACCACTATGTGACCTTGGCCAAATTA
TATAATTTCTGAACCTGTTTCCTTAACTATAAAATAAAATTACTATCTCTCACTGGAGAG
ATGGCTCAGTGGCTAACAGCTCACTCGCTGCTCCTGCATGAGAATCTGAACTCAGGTGCN
AGCACCTATGTAAAAAGCCAGACATGGCAATGTACATGCCTATGGGGAGGACAGAGCCAA
GAGGATCACTGGAGTTTGCTGGTCACCAGCCCAGCTCCAGGCTTTAAAGACGGAAGTCAG
AGAGTGCTAGAGCAGAAGAACACTGGGTGGATAGCCTTCTCTAGCCTTTGCATGGGCACA
CATCACTCTCATCATGCAGACAATCTGTTGTAAAAATAAAAATACACGTAAAAGTCACTT
TTGGTTTTTTAGCCAGACCTTGTATATAGTTCCTACTGGTCTGAAACTCACTATATAGCC
CAAGGTGGCCTTGAACTTCAAATAAACTTACTGCTTCAGCCTATAAAGTCTCAGGATTAC
AGATATGGGCCACATTGCCTGGTAACATATATGTCTTCTAAAAATATCTGGCATACAGTA
TAAACTCANCAGGAATAAACTATTGAGCTAGGCAATGGTGGCGAATACCTTTAATCCCAG
CACTCGGGAGGCAGAGGCAGGTGGATCTCTGAGTTTAAGGCCAACCTGATCTACATACTG
GGTTCCAGGACAGCTAGGGCTACACAGAGAAATTCTGTCTCAAAATAATAACAATGATAA
TAATTTTAAAAAAGAACTGC
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