SelenoDB
Release 2.0
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Promoter Report for SPR00003185_2.0
Identity
PromoterSelenoprotein R (SelR)
SpeciesNeotoma lepida (Desert woodrat)
Promoter IDSPR00003185
Promoter release2.0
External IDNone
Transcript SPT00003118_2.0
Annotation
Prediction method(s)
Promoter prediction (5000bp upstream, N/A) [Report annotation error]
OrientationReverse
Structure gene structure

FeatureCol PromoterCol Coding exonCol Non coding exon (UTR)Col IntronCol SECIS
ResidueCol SecCol Cys or Other

ToolboxForward   Reverse    
Sequence
>SPR00003185_2.0 # Promoter # Selenoprotein R  (SelR) # Desert woodrat (Neotoma lepida) Full length # Reverse
GGCCGCAATGGGACAGGCTAATAGATACCCCCCGGGGCTCCTAAATCCCTCTGCTCTAGA
CTCGAACCCGCCCCCTCCCCAATGACCAATCACGTAGAGGTGTGCTCTAAACCACGCCCC
TAGAGAAGCCGTGTCACTCCAGGATTTTCCACTCCTCGCCTCCTAGAAGCCCCGCCCTCG
ACGAGTCTTTCCTCCAGTAGGCCCTAAACCCCACCCATCCAACCAATCCCGCCCAGGAAC
CAGGTTCCCACTTCCGCCTCCAGCAGGCCCCGCCCAGAGAGCCTTTTGGGCGGGGCGCGT
CTCCTGCAGCAGAAGCCNGGGCTCAGGCAGAGTTTCAGGAGAGCTGCTAGACCACAGGAC
CCCAGTGGTAATGGCCCAGAACTGGAGTGCAGCCACATCCACCCCGCTGCATCCCTAGTC
CGCCCTAATTGGACGGTAAACCTTGCGCCCTGAGACGTCGGCCCGCCTTTTGGCGCGCCC
CCCCCGGCCCCCCCGCAACCCTCTGACCCAGGCTTAAGAGTTGCCTCAGGACTTTATTAG
ACAAAAAAAACAGGACAGGCAGCAGGAGCATTCCCAATGTGTGCTCCATTCCAAGCATCT
TATATGTTTCCCGAGGTCTCCGGCTTCTCTTTCTCCAGATGCTTCTTTTGGGGGCCCTGG
TTAGGGTGGGGGGACAGGAGGAACGTTAGTCACGAAAGTCAGTCAAGAAATACTGCCTAC
GACCATCACCAGGGCTACCCAATGCCTGCTTTACTAGACCCCTAAAAGCACCCTTCTTCC
AGTTCCTCTCCGAAACAAGCGGGATACGAAGTTTTGAGACCCAGAGAACAAGTGGGACTA
GCTCACCATGAAGGCCCTCTTCTCCTGCGCTGTTTGGAAACGTCCATGGCCAAACTTGGA
AGTGGTATCAATGAACTTGAGCTCGATATTCTCCAGAAGCTGGCGGCTGTGGTGCACTAG
GAGGGACTGGGGATCCAAGAGAGAAGAGATGTCAAGAATGGAGAGCCCCCACTCGTCCTG
TGAGCTCCAGTTCACACCGAGAAGGACTCGCTCACTCGCTCCTGCCAGACCCCTTCCTTT
ACTCTCCCACCAACCCAGCCCACCACAGAGCAGGCTAAAGGACCGAACAGCCCACTAGCC
ATCTTGCCATGCTGCACTCACCTTCCTCAGTGTGATCACCCGCTTCTTGGTACCTGCAAT
GCAGCCCTTTATCATGATGAAGTCATTGTTCACGTCCCCATAGTGGGGGAAGCCACCCTA
CAGAGAGACAGATCACACCAAGCCAGGGACAGTTAGGGGGCTGTGATATGAAGGAGGCCC
ATGCCCAGACCCCAGAGTGTGAGGACAATACCTCACACCAGCTCACTCCAGGGCAGCAGC
ACATCTGAGCCACATACCAAGTATTCTTCCTGTCTTATCTCACTTAACAATATGCCTTTT
TGTGGGGGACACTGAGGCTTAGAAGTTTGGGGATGCCGAGCATGGTGGTGTACACCTGTA
AATCCAGCACTTGAGATGGCAATACAGCAGGATCACTTAAGAGTTGAAGGCTAGCCTGGG
TAACAGTGAGTCCCTGGCTCAGTAGCTCAGTTGGAAGAACGCTAGTCTAATATGCATGAG
GCCCTGTGTTCGATCCTGAGCACCACATTAAAAAGTAGGGTGTTAGTCAGGCATGGTGGA
ACATGGCTTTAATCCCAGCACTTGGGAGGAGGCAGGAGGATTTCAGAGTTCAAGGCCATC
CTGGTCTACAGAGCAAGTTCCAAGACAGCCAGGGCTACACAGAGCAAAAACAGGGTGTGT
GGATACCCATATGCTCTCAGCACTCAGATACAGTAGAAACAGGAGGATCAGAATTTCCAG
TCATCCTCAGCTATACAGGGAGTTGGAGGCCAGCCTGGGCTGCAAGAACTACAGACCCAT
GCTCGGGCTCCATGGCTGTTTCCCTCTAGCTCAGGGCTGGTTCCTAGGCCACCATAGGAG
CTGCTGTATGCATTTCTCCTCTCTGCAGGTATGAAGGGTGCAGGAACAAACAGGATTGGG
GCTTCCAAGTAGTTGCTCACTGCCATATCAGGCCTCCCACCACTGACCTCCGACCAAGAC
CCTGAACCTAGTCTGTGTGGGGGGGCAATATCCGGTTGTGGAGCATACATAATGGAACTC
TTGGGGCAGAATAGCACCCAGTTAGGGCCTGTCCCCCAACCTCCATTAGACCCCATTTTC
AGCCTGGCCATCTCGCCTCACCAATGGTGTGATAGTCTTGTCAGTTATATCATAGCTGGT
GGACGCATTGTTTCTGACCATCTTCCCATCTTCCATGTGCAGCCCCCGGCCAATTCGATA
GATCTACCAGGAAAACAGCAGTAGGGACCAGAGGTGGATTTGGGGCTAGAAACATGCCAC
ACACACACCCAGCACACATGCTCAGACTCTGGAACTAGTAATGATATTCATGAACCCAGT
CAGTGTTTGAGTCATGCCATCCNACTAGAGACCCCTCAGAGCTATGGACACACCTTCTTG
TTCAGCTCTGTACGGTGGTGGTAACCCTTCTGCCCAGCCCGGGCGATGGAGCAGCCTACT
CGGGCAGGGTGCCAGGCACCAATGCAGGCCACCTTGCGCAGGCCTTTGTGGGTCTTCCTT
GGCAGCTTCTTGGTATGCCAGCGGCTAGTGACCCCTGTAGCATAGGAAGGGCTGAAGGCT
AACAGGCCACTCTAGCCCCCACCAAACAGTCTTCCCTGGAGCTACTGTCTCTACCAGGCC
CTACCTTTAACACCCCGGCCCTTCGTGACAGCAATGACATCAATGACCTCACTCTGGCTG
AACACACTGTGTACAGGCACCTGCTTCTCCAGCCGTGCCTGAGCCCAGGCCACCTTCTCA
GCCACAGTACCACCGTTCAGCTGAATCTCCATGATGTGGGCCTTCTTCTGCCGAAAGGGC
AGCAGCTTCATCTGCAAGACACAGCAGGGAGGTCAGTTCACAAGCCCCACACACCTGCAG
ATGGCTAGCCCACTGGTAACCTGACGTCTTCCCCACTTGTATTTATTCACAGACATTATG
CCCCTGCCACATGCTGGCTGCTGTAGGTGCAGCACAGATTGAGGCAGACAGCGTCCCGTA
TCTCAGGGAGTCCCACCATCTCCTTTGAGGACAGATAAAAGCCAAGTTAAACTCTTGGAG
AGGGCTCGGTGTTCCAATAAATGACCGGCAGCACCTCAGGTAGAGTGGACAGGGAGGGCC
TCTCTGAGGAAGTGACCAATAACAGCAAAAAGTCACTAGGCAAAGATCCGAGTGAGATTA
TGAGGAGGCAGCATGTAAAAAGACCCTGTGTCAGGAAAGATGGAACGATGATGGGACAAT
CTGGCCAGGTGAGAGCTGGAGGGTGCCAGTGCCAGGCAGATGTAGGAGTGGGCTCCAACT
TTCTTCCAAGTGTAGGTTGCTAACTAGACCATTCAACAAAGCTCTGGCTGCTATGAGCAT
CACAGGCTAAGAGGATATACAAGTGGAAAGACACCAGTTAGATCACAGCACAGTGTTGGA
AAGTATTTATAGAGCTCCTACTGTATACCAGGCTTGTGTTAAGCCCCAGGCCCACGGGGG
AATTGGATGAGTGTGACCCCTGCCTCCATGGTCCCTGGAGGTCAAACTGGTAAACAGCAA
GCACTGACTTGCTTACCCGTGAGCTGCAGGTATGAGAGGAACAGGAGCCTGTGTGCAGAG
ATCAGGGAGGTGCCCCGGAGGTTAGGGCTGCTGCTGGGAAGGGCTGTCTCAGAAGACAAG
ATGCATAGGAAAATTCCAGAATGACTGTTCTGGTTAAATTTCAGTCAGCATCAAGCTAGA
CCCCAGGTACAGCCAGTTCTCCATGCTGGGCTTTTGGACATTTGGGTACCTGAGTTGTCC
ATGGGATACTCTAGCTGTTGATGACACTAACATAACACATCACGTGCCAGTGACCTCTCA
ACTCTAGGACAAGAGTGGCTCCTGAGGTAGCCGGCCAGATCTTGAGCCTGTTCCCAAGGC
TGCTGCTATTTTTGAGCTGACATTTGTCAGGGCTCTTCATTTGGAGGTGGGGGATGGGAG
AAGGCACCCAAAGGTTGATGGGCTGAAGGTGGGGGCTGGACTGACCTGGGTGTGGACAAT
GACCCGAATGACCTTGCAGTACTTCTTCATGGCGGCAAAGTCTTTCTGGAGCTGCTTCTT
GCCGCTGGAGTCTCGCCACCTCTTGCAGGCTTTGGTAAAGGCTTTCTTCTTACTCTTGTG
CCTGAGCCACACACAGAGTGCTCAAGCTCCAGCTGGTAGCTCCCTGCATTGTCCTGCCTG
CCCTGCCCTGCCTGCAACCCACCAAGCAAGAGCCCTGGCCTAGGACCTTCCTGAGAACCT
AGGGTGTTTCCAGTCACCATTCCTGATCATTTTCTCTCCCTCCCTCCCCCCTTCTCCTCT
TTCTATGTGTGTGGGTGTGTGTGTCTCAAGAGGGTCCCACTATGTCACCCAGGCTGGACT
AATACTCCTGATCCTTCTAAAGTGTTGGGATTTTACAGGCATATGCCCAGCAGTAATCAG
ACCTCTAATGCCTCCTTCAGACACAGTGAGCAAATGCTGTGCCTCCAGTTAGACAGACAC
CCTTCCCAACCCTTACTGGGGCTCTAGAAGGTAGAATGATGAGTCCTATCCCAGAGATGA
AGAAGCCACGGTTCCCAGAGGCTAAACTCTGGATGAAGAGTAAATTCATAATACAAACAG
TACAACCAGCATCCTTGATGCTCACCAGTTACTTCAGGGATTGGGGGGTCACGGGGGCAG
CGGCTGCACTCTACACCCTTCATCTACCCATGGCATGCAAGGGACACAAGGTGTCAGCCA
ACTTGCCCTTGGCCATACAGTCCTGCACCAATGCTGGGGCTCATATTCATTACTTCCCAC
AGAAGGTGAGGCTGGGCCCGTGTCTCCATAAGATATTGAAGGAATGAAGTTCCCCAGGCA
GGGAGGTGGGCCTTCCCTTT
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