SelenoDB
Release 2.0
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Promoter Report for SPR00003276_2.0
Identity
PromoterSelenoprotein U (SelU)
SpeciesIctalurus punctatus (Channel catfish)
Promoter IDSPR00003276
Promoter release2.0
External IDNone
Transcript SPT00003209_2.0
Annotation
Prediction method(s)
Promoter prediction (5000bp upstream, N/A) [Report annotation error]
OrientationReverse
Structure gene structure

FeatureCol PromoterCol Coding exonCol Non coding exon (UTR)Col IntronCol SECIS
ResidueCol SecCol Cys or Other

ToolboxForward   Reverse    
Sequence
>SPR00003276_2.0 # Promoter # Selenoprotein U (SelU) # Channel catfish (Ictalurus punctatus) Full length # Reverse
AACACAAATACACAAAACACAACAATAAACAATTGAATGGGGAAAGTCCTGTTGTGTATA
ATGGGGGTAAAGTTATAATAATGCACACCAACTCATTCGAATACTACTACTACTACTACT
ACTACTAATAATAATAATAATAATAATAATAATAATAATAATAATAACAATAATTAATCA
TAGCGCTGTACGCAGTACTTGACAAAGGCTACGTGTGTGTGTGTGTGTTAACCTGTGTTA
GAGTGTGACTCACCCCCAGTGGTGGTCCTCAGTTCAGCGTTGGCGAGTGTGTCCAGCGAG
GCGGGCTGTGGTTTAGTCAGGAACAGGTCAGTGTTGAGCAGCAGGACAGCGACAGTGATC
ACACCCACAGCCAGCATCCACACATCCACACTAAACCCTGCTATATTCACAAACACTGCA
GACCACAAGAGACAAAATGCAACAGAAAGTGTGTGTCGATAAGAAGTAAGGATAAGACAC
AGGAAGGCTTTATGATCCCGCAACCTGGAGAACATTGCTCATAACTAACTATAAGTATTT
GTATTATATATATGTACGTACACATACACATACACTACCGGTCAAAAGTTTAGACACTCA
TTCTTTATGATTTTTTTCTCCCACATTTTAGAATAATAATAAAGTCATCAAATCTCTGGA
GTAACACGGATGGAATTATGTTGTGATAAAAAAAAAATCCAGAATAAATCAGAATAGTTT
AATATTTTAGCATCTTCAAAGTAGACCCCATTTTTGCCTAGAATTTGCAGAAATGTATTC
TTGGCGTTTTCTCACCCGATTTCTTGAGGAATTTCCCTGAGATGCTTTTTAAACAGTCTT
AAAGGAGTTCACACCGACGCCGGACTCTTATCGGGTGCTTTTCGGAAAATATTTCACTCC
GAGTCGTCCATTTAAAAAAAAACAACTATTTTATAATGAAAGAAATGAATATGTCGGCAC
GATCGTATATTTGTCTATATGACCGATTTCAAACATTTAATCACACACCTTCAGATAAAA
AGATTTTTAAGATCATGAGAAACATTTCAGTCAAGTGTCCACAAACTTTTGACCAGTAGT
GTAATATATATACATACAGACATACATAATGCATCCAAATATTCACTCTTTCAGTCCACT
GGTATAGAAGTTTGTTGAATTCTGGATTCTGATTGGTCAGAAGACAGCAGCTCGGACACT
ATCAGAGGTTTATATTAACATTATACATTATCGTTTCCATAGTAACGGCTCATGCAGATG
CTTCACATAGATGTTGATACTGATACGCTGGCGTTTTCTGTAAGGAGATGTTTATTTAGC
ATCAATGGAAGGAGTCTCCAGTGTCAGTAACAGTCAAAGATAAAGCTGTAACTTCAGGAC
TGAAGAGTTTTTTGTTTGTTTGTTTTAAGCTCAAAAGAGTTATTTATCTGAAATACTCAC
TTTTTGCTGGAGTTTGAATAAAGTTTTAAAAGTCACGTCTCATGGCCGTGAGTTCATCTG
TCCCATCTTTCGCTCTCACACACAGACCCGGTCACAACAGTGGCTCCGTGACTGAACAAC
TTTATATACAAACACTAAACAAAAAAATCCAGGGCTAATTTGCATAAAGAAGAAGGAATC
AGCCAATCAGGAGCTGTCTCATGTGGGCAGGGTTAGAACATGAGCTCAGTGAAAACATAA
AAAACATGAATATCATCACACACGCGCCTAAAGACATAGTTGGTCTCAGTAACACAATTT
CTTTCCTTTTTTATAAATTATATTTTCTCTATGGGAACACCCTCCAAAGAGTAAACCCTA
AACACACACACAGACCTCCATTGAGTATGATTGGAGCTCAGGGTTCTGTGAAAGAGCGTA
AAGCCTCAGCAAGCACGACTCCCACATTTCCCACTGAACAGGTCACAAGCTCCATGACTC
ACATCAAACATGCTCTACACACACACACACACACACACACACACACACACACACACACGA
GAACCGCTTTCTGTGATGAAATAACTGATGGTATTTAGAGCAGGGGTTGGTGTGTGTGTG
TGTGTGTGTGTGTGTGTGTGAGTGAAAGTAGGTGACAAGTGCGAAAGAGCGTGCTATAAT
TAGAAGTAAAACCGATTTTATAACAGGCATGTGCTGTGATATTTATTTATTAGAATAGTT
TTTTTTTTAATAAAGTATTTTATTCCAGAAACCTTCCAACCACAGAACCTGAAAAATAGA
TTTAGTTGTAGTAGTAGTAGTAATAGTATTCCTAGTAGTAGTAATTGTAGCAGTAGTAAT
AGTAGTAGTAGTAGTAGTATTCCTTAGCAGTAGTAGTTGTAGTAGTAGTATTCCTAGCAG
CAGCAACGTCAGTAGTAGTAGTAGTAGTAGAGTAGTAGTAGAGTAGTAAGACTAGAAGTC
GTAGTATTCATAGCAGTAAGACTAGAAGTCTTAGTAGTAGTAGTATTAGTAGTAGTAGTA
GTAGCAATAGTATTAGTAGTAGTATTCATAGCAGTAAGACTAGAAGTCTTAGTAGTAGTA
GTAGTAGTAGTAATAGTATTAGTAGTATTATTCATAGCAGTAAGACTAGAAGTCTTAGTA
GTAGTAGTAGTAGTAGTAATAGTATTAGTAGTATTATTCATAGCAGTAAGACTAGAAGTC
TTAGTAGTAGTAGTAGTAGTAGTATTCATAGCAGTAAGACTAGAAGTCACAGTAATAGTA
GAAGTAGTAGTTGTAGAACTCACTCTTGACTTTTTATTTTGTTGTTTTTATACACACGCG
TTCAGTAATTGTGAAGTTTCCAGCTGTAATTGGATCATTTGCAGCGCTCCAGGTTCATTA
CAAAACTGTTCCAATCAGGGAATGTTTTTCAATGTAAATAAATCCTTTATTTATTAAGTA
TTTAAGTAAATGTAGCGGATAGCTCAAGATACATCAATAACTTAAACAAAATCTTTACTT
AATTATATAAATATTCGTTCTCTCAACTTAGTCCATGTTACATGATTGTTTTTGTCTCCA
AAGGCCCGTGGGATTGGGGAGGTTTCGATTCTCGGACAGTTTGGTAAGTTGTCATGGAGC
CAGACATTGTGTTGCACAATTTGGCATTTTCTCACAGGGTGTGTGTGTGTGTGTGTCTGT
GTGTGTGTGTGTGTGTGTGAGAGAGAGTAGATTAGCTTGTGCACAGTAAACGGACCACAT
TTTCCCTAACTCACTGATAAGTCAGTCTCTCTCACTCTCTCTCCCTCACTCCCTCTCTCT
CCCTCTCTCGCTCTCCCTCGCTCCCTCTCTCTCTTTCTCCCCCTCTCGCTCTCCCTCGCT
CCCTCTCTCTCTTTCTCCCCCTCTCGCTCTTGCTCTCTCTCTCTTTCTCTCTCGTTCGCT
CTCTCTGTCTCTCTTTCGCCTGCGCTCTCTCTCGCTCTCCCTCGCTCCCTCTCTCTTGCC
TTCGCTCTCTCTCGCTCTCTCTCCTTTACTCTCGCCCTTGCTCTCCCCTCTCCCTCTCCC
TCTCTCCTCCTCCTCCTCCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCCCTTGAACT
CCTAAAAACGCCATAATGAAAGCAATAAATCAGAAATATATCAGACACTGACTGGGAATT
CAGTCTCCCTCGTATTGACCTGACCTGAACATCTGTACCGTTTACATCACACAATAATTT
CTGGATTTACTTAAAAACCTTAACAGACTGTTTGTTTTTGTACCTACACACATCGACTCT
TTCCTGATTCTCTACGTGTGTATGACGCAGTGACCTGCTCTTGTATATTGCCGTGTTTTG
TTTAGTATTAAACGTGTTAAATCAGACGCTTCTGATTTCCTCTCTCTGTTCATGTGGACT
ATCAATAAGACGAGCGTAAGAAACCCAGCCTTTTTTTTTTTTTTTTACCGGCCCAACATT
TGCAAGTAAAACCGCATTCATTTACGTTTAAATGAGATTTCATGAAGAAAATTCACGATG
GCCGATATTTCAAATAAATGGTGTGCAAGAATCCGTCAAGTTAAACTTTCGACTTTTTAA
ATTTCCCTTCTGAAATCAGGAATATCGTAGTTTAGTGTTTTTTTTCCCCTGCTCGGACAC
ACCTGATTCGTGGATCAAGGAAAACACAAATCCCGCAAAACAATATTTAATCTTGTGAGA
AATGAGCTACAGAGAACGGCTTCATGTATTATAACACGTTCGTATGCTGCTTCAGAAAAC
TTATCCTTCAAATATATTATATTACAAAACCTATATAGTATAAAGCGTGTCTAGAGAGGA
TATGCCTCATCTTCAGTCTTCTTCATCTTCCTCCTGCAAAAAAACAACAACAAAAAAAAC
AATAATCTTGTTAGTAAGGCTATTAATCTAGTGTTTGGTTCATTGTTATTAGAAATACTA
GCTCAATTATTCCAGTCAGTGGAAAAATCTCATAGAAAACCGAACATTTTTAAATTTCCA
TCATAGAAAAAGAGCTTAAGTGAAAGAAACAGAATGTTCTTCACGCTGAAGAACCGAAAA
ACCAAAACCAAACCACGGCTTGAAGCTTGCAGAGAAGACGCTTAAACACACAAGTGACAC
AGAGACAAGCGGAAACGTCACCGTGTCCTTGAGCGTGCTCGGGTTGGTGAGGGTCTCGGG
CTCTTCCTGTCTGGGAGCGTCGCTCTCCATCAGAGCTGCTGATTGGTCTTCGGTGACGTC
GGTGTGTATGAGCTCGGCGTCGTCCTGTTCCAAAGGAGAGCATACTCAATACTTATACAT
CCTCTCTGTCTGTCTCTCTCTGTCGCTTTGCTTTCGTTTATTTCTCTTGAACTCTCTCGG
TGATCCTACAGGCTGAGAATAAAGTGAGTAAAGTGTCACCTGCAGCATCAGAGAAGGTTC
TGGATTGACCGGTTCTTCCTCTGTTGATTTGAGCAGAGTTTGTGATGCGTCATCGCCTGC
TTGCTACAAGGAAGTGACATCATGCGTGTCAACAAAACAGCTCTGGCTTTGAAATATTAT
CATTTCTACCATAACTTGAA
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