SelenoDB
Release 2.0
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Promoter Report for SPR00003538_2.0
Identity
PromoterMethionine sulfoxide reductase A (MsrA)
SpeciesNeotoma lepida (Desert woodrat)
Promoter IDSPR00003538
Promoter release2.0
External IDNone
Transcript SPT00003471_2.0
Annotation
Prediction method(s)
Promoter prediction (5000bp upstream, N/A) [Report annotation error]
OrientationReverse
Structure gene structure

FeatureCol PromoterCol Coding exonCol Non coding exon (UTR)Col IntronCol SECIS
ResidueCol SecCol Cys or Other

ToolboxForward   Reverse    
Sequence
>SPR00003538_2.0 # Promoter # Methionine sulfoxide reductase A (MsrA) # Desert woodrat (Neotoma lepida) Full length # Reverse
CTCTGTTGAATGGAAAAAGGGGAAGAAAAAAACCAAAGAGGCAGCAGGCACAGATGTGGA
GAACTCTCCCCAACACAAGGCCAAGAGACATAAAAAGAAAAAGCATGCAGAAGCGGAGAT
GGAGCCTATAGGCAAGAAGAGAGACCGAGCCGAGCTGCAGTCTGGAGGCCCCAGTGGGGA
TGAGTGTTCCNATGCCTCTTCCGGAGCTGCAGAAGATTGTGTACAACCACCCGACAGCCA
GGATGATGCCCCAAAGTCCAAGAAGAGGAAGGCAAAGAAAAAGTTGCAAAGGCCAGGAGG
GGTAGCAGTAGACACTACACTAGACAAAGCATTCGTGAAAAAGAAGAAGAAAGCTTCCAG
ATGACCTCTCACTAGCCAGGGCCTCTGACCTGTCAGCACACTGCAGGGCAGCTGCTCTGG
CCTGAAGTCAGAGCACAGTGAACCCAGGCAGCTCAGCATCTTTTAACATGCCCACAGGTT
GCCAGCTCTCNCCTNCTGACCACATTTCCCCCCAGTNACCTTCCTAAGAGAACTGATTTG
AATGTTCTAGATCATGACTTTTTAATAAATAAATTTCAATAAACAAATAGATTCTTTCTT
ATATGCTGAGCCTATCACATGAGTACTTATTCACATCCATACAAATAAAGGGGTGTGTGT
GTATGTGCACATGCGCGAGTGTGTGGGTTTGCTCTGGTTTCCTTCAGTAACTGACTGGTG
CTTCCTTCTGAAGGACTTAGTCTAATTAAGGGATTAAGAGGCAGTGACTTGGATGCAGAT
GGTTCCTTTTGTTCTGCAGCCAGCCATACATTTCTGCCAAGTGGGAATTACATGACTGCA
TTCCCGAGTGAGGTTTTGCTGTGCTGTGCTTCAGTGTTGGTGGGTGGATGTTTCTCTCTT
GTGCTGAGTGCTGGCCACCAGGGATCCCAGGTCCCCCTCGATGACAGCACCAACTGGGAA
CAGTGAGTGCCTAGCTTTCATAGGTCACCAGGGGTTCCTGCACTAGGTGTATAGTCAGAC
TTATTTCTGTCTCATGTTCCTTGAATGGACCCCCTGTGGTGGGCTTGTTTGTGTCTAATG
ATCAGGAGGTCCCCAGGAAGTTCAAAGAATGGAGAAGCTAATGCATGAAACTGATTGTTC
TCTTGAGGGCAGGCTCTGCATTAGGACTGCCTTATGGAAGCTCTTGCAAGTGTAGATATT
TATGAGTAGACCAAGACACCTTCTAGCCCTGCGCAAACCAGGTGCTGTTGCCTCGTGTCC
ACACTTCCTCCCCTTGCCACCACCCACATGCCTTCTAAGTGCCTCTGCGAGCCAGCCAAC
TGCTGAGTATGGTTGTGGAACCCGCAGCCTGTGTCCTCTCTGCCTTCATTTCTTGCCTTC
TTTCTAGCTCTCCTTGTATTTCCAGTTCTCCATTTTCTTGCTTGCCTCTCAGACCCTGCC
TCCCATCCTTTCTGAGGCAGTCTTGTGCCACTGGCCTTAGTTTTCATAGAACTGTCGAAG
TAGTGGTGGGGACCACTCCATAGACCTATGCCTACACTGCNATGTTTTGCCCTTGATTAT
AATTTCTGGGGTCTTTGTGTTACATGGGAAACTCAGCCTGGAGAGTCTTGAATTAGAAAA
TCCATGGAGTAGCTCTACTGTCTAAGAACACTGAACAGTGTCAGTGGCTTCAAAAGACAG
TCCACCACCCCAGAGAGGATCAGGTGGACTTGGAGCCTGAANCAATCTTGTTTCATCAGG
TCTCCTGGAGTTTAGAATCCCAAGCCAATAACGCCTCAAAGGTTTTTAAAGTCACTTTTC
TTCACAACTTCTTTGTTTGCCCCATCTTGTCTGTGAAACTAGAGACCCAGAAGGGAGCAC
AGCTGTGTGAGAGCTAAAGGGTACAGCTCTTACCAGTGCATGTATGCTGGCTTCTTTTCC
CTTTTGTTGTATTGAGTTTAAAGGTTTGTTTACTTATTTGTGAGTATGAGTGTTTTGCCT
GCATATGTGTACGTACNCTACGTGCATGCCTGGTACCCAAGGAAATCACAAGAGGGCATC
ATATCCCCTAGTACTGGAGTTACAGATGGTGTGAGCTGCCATGTAGATGCTGGGAACTCA
AAGGGGTTCTCTGCAAGAGCATTAGTGCTCTTAACAGCTGAGCTATCTACCCAGCCCCAG
TTGTAGTGTTATATTGAATTTAATTTCCTAGATTGCCAAGGGCTGGAGCTCAGTGATAGG
GAGCTTGCCTGGCTCCATCTATAGTGAAGAGAAGGGAGATGGGGAGGGGAGACAGGAGAC
AAGAGAGAAGAGAGTGGAGTTGTTTGTAGGATTGGGAACATGTGAGATCCATTTAGGCTA
ACTGGAGAGATGAGTCCCNAGCAGCCAAATGCAAGTGGCTTCAAGTCACCTTTATAGAAG
GATATAGAAAGTGATTGTAGTTTTAATGGGCTCCTGGGTGATTTTTGTGTAGTTTTTGCG
GTGCTGGGAAGCAAGCATTGGCTTATAGTAACTGTCAGTCAGCAATCTTAAATTAAGTAG
GTGACTGAGAAAAAAACATGTGCTTAACTCGACCATTGGCTTTNAAGGAGACAATGCTTT
CTCCAGAAGCCTCCCCTTCCATGTTTTCCCACTGGTCTCTCAGACTGTCCTTGGGTCAGA
GGGAAATTGGAATAATAAGAGGACACAGAGAACTGCATGTGACCATCTGGATACTTGTAA
AATCATCGGCACACAAGTCCCGCCTTTGCCTGGAGTTACTACACCAGGTAAAAATGCATC
AGTTCTACGTCCTTGGTTGCTTTTCCTCATCAGCCTTGGGTCATTAGAGGAAATCTGAGT
TCCCAGAAAAAAAGAGCAGCCCTCTGAAGAGCTGCTCCCATGTTGTCTTGCAGTAACCTT
TTCTATGGATTTTAATAGACGATTACTATTAAGTGGAGCCTTATGTGCTGGGCCCTATTC
CAAGCACTTTAAATAAATCAACTTGTTAAATTGTCATTCAGCCTTGTGAGGTAACCTCAT
TCCTGTCCCCTTTATAGAAGAGCCTTTTGTGATGGCCGGAGATTTATGCTGCCCTGAAGC
CCTGTGATACCCCAGCCCCTTCGACACACCACCATGGGCCCCTTGGCTCTCAATCCCAGC
TTCACCTGCNTTGTAGGCCCTTGTGTTGCATCGTTCCCATAGTTTGGTTACTTACTGGCG
TGTGGGAAGCAGCTGGCAAAACACCAGAGATTTCCACAGCTAACCCACATGAGCTGTACA
CGAGAATGTGCTCTTGGGTACATTTGAAATCCCCAAAGAGGCCTCCTTTCCACCCTGGCC
CTGCAGTTGCTGGGAACCTGACTAAGTGAGCTTCTTTACAAACTGTGTTGAAGACTGGTT
AAAAGGGTCCTCTACTTTGTAGGAAATATTGATGCTTTGGGAAGATAAAACCCAAACCAG
CATTTGTTTTCCATGCCTCTGTTTCTCTCACCTGTCCCCTGAGTGGCAGAAGCAGGCCGA
GACCTGTTTGCTCGAAAGAATCAGCACCAGAAGAGTTTGCTTGCAATCTCTCCCAGTGAT
CTCAGCTCTTGGATCAGCCAGCAGCGGCTGTATTTAGATTTGAGTAAGAACTTCCTCCCC
ACCCGCCACCCTGTTTATCTCTCTCAGCTTCTGCAGCCGCTGCAGTTTAGAGCCTGTTGT
GCTGGCATGGAGCAGAAGAGGTCAGATCGGGTGCCCGGTGTGGTGCGTGTTTTTATGGTG
TACCATTATTCATGAGCAAATTAGTACCATGTCCTAATAAAGGAGGCGACTAACCTCACA
TACAAGCACAGTCTATTTAGGAAATACTGNATATATTAAAATGACACACACAAGCTCTTC
TGGATCCAGCAAGAGGAGAGAAAGGCAGAACAGAGAAAGCTGGCCGAATCAGAGTTCCTG
AAGTGGCGCCGATGGTTGCAGTTAGGGACCAGCTGATGGACTGAGGGCCTGAGTTGGATT
TTCATGTGAGGCTAAGTCACCGTGTAAGGAAGCCTGCAATAAGTTCTTTAACTGAGGGAA
GGGCTTTGTAACTAGTTACATCTGAATTTTTCACTCTGGATTTCCTTGGAAAAGTGAACA
TAAATGCCAAAAGGCAATTACCNTAAAAATATTTCTTGATCACCAACTTCAGGCTTCAGG
CTGCTCATGGTGGAAGAGCTGACCCACAAAAATCTACCCATATCCCTGTCTTCCCAGTTT
GTCCTTTAGAGCAGACCAGTAGATCTGAGATAATCCCATTGCATGCACCCGGGCTCTNGC
CTCCTCTCCTCCAGCCAAGCAATGTTTCGTCCTGAGAACATCCATGCCAGTGCTCCAGTT
GGGCTGGAAGCTCNGAGAAATTCTTTGCCAGCATATTATTTAACCTGAACCTGGGAGTCA
ATTTGTCCTAAAATCTCTGTATCAACAGCATTTCTAGCTGATTAATTGACCGTCATTCTC
TATGTGTTCCCTCACACATATTACAATAAGCATCGATTTTTGCCGTCCCCGCCCCCACCC
AGAGTCCATGTGAAGACGAGAGCCCAGCTACCCTCCTATGGCCATGTCATAGCAGGTCTG
CCGAGGGGTCAAGGATGTAAGGAGCAAGGGAGGTAGCCTACTCTACCCACTGCCAGAGAT
AACCCTTCAGCCGGAAGGGACCAAGCCAACCACTGAGGTGTCTGTTAAAATTGTCCAACT
CAGCTTTACAATGTGAAACATTTAGGTAGTAAGTAGTCTAGGAGATCATGGCCCAAGAGT
GGCAAATGTGTCCAGTTCCTTTCACCTCTTCTCTTTCGGCCATTCTATAATGTCCACCCC
AGTCTCCTCTCCACTCCTGCCCTCCACTCCGAGGGAGAAGGCTTCACACACCCTGAGTGT
TTTGGGGGGTTCTGTGCTATTCTTCCCTCTCACTCTGTGGAGATGCTGCATCCTGGATAA
TTCCTAGTTCTGTCTGCAATTCAGTGATGTCAAGCTTTTAACCTGCCTCTCCAGATGGCC
TTTTCCAGCACCTTCAAATT
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