SelenoDB
Release 2.0
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Promoter Report for SPR00003540_2.0
Identity
PromoterSelenoprotein U (SelU)
SpeciesNeotoma lepida (Desert woodrat)
Promoter IDSPR00003540
Promoter release2.0
External IDNone
Transcript SPT00003473_2.0
Annotation
Prediction method(s)
Promoter prediction (5000bp upstream, N/A) [Report annotation error]
OrientationReverse
Structure gene structure

FeatureCol PromoterCol Coding exonCol Non coding exon (UTR)Col IntronCol SECIS
ResidueCol SecCol Cys or Other

ToolboxForward   Reverse    
Sequence
>SPR00003540_2.0 # Promoter # Selenoprotein U (SelU) # Desert woodrat (Neotoma lepida) Full length # Reverse
CAGATGCCATCAAGTCCTGTGCTTGGGCAGCCAAGAGCCCAGATCTGAATCAAACCCAGC
ACCTGCCCTTGAGGAGTCCAGTCTTTTGAGGGGACTGAGGGATGGCAACTTAGGAAGCTA
TGTCCCAGTATTTGGGACACATGAAGCCAGGCATTGTTAATTACAACAAGAGTAGGCNGA
AGGTTTCCTAGATGACAGGNATATAAAAGTAGATTCCATCTGGAGAGAAGAGAATAAAAA
CAGAAAAACCTTATGAAATAGAGCTCAGAGCCCACTTTGAAGGGTGCTAAATGACCACCT
GAGAAGGTAGACCCACTCCTTCCTTTAGTCTTCTTAGGAAACTGGGGTCACACTTCCAAT
ACTGTGAAGAAAACNCACTAAGACATAGGACATCCCAGTTACTCTGAAGTAGTAAAACGA
TATCATCAGGAATCATCAAAATTCTTTAACTCACTGTATCTGGACACTAGCCTTAAATTT
TCAATGACCTGTAATGTGTTCTATCATTATAAAGACAAAAAAGAAAAAGAGAAAAAAGAA
AAAAGAAAAAGAAAATGAAAAGTCAGGTCAGCAAGATGGCTTGTCCAGTAGAGGCACTTG
GCAATATACAGGGCTAACAATCTGAGTTCAGTCCCTGGATCTTGCATAGGAAGGTGAGAA
CCAACTCCTGAAAGTTGTCCTTTGACCTCCACGTGCACATTGTGTATGTACATTCCTGCT
CGCACACATAAACACACACAAATAAGTAANTAATAATTANAAGCCCACCATGCTNTGCTG
ACTATTGGGCAGTAAATGAGGAAACTGCAATTACTTGCTCAATAAGCCAACTGCAGGCAG
TGAAAACTCGGGGAGGAATGTATAATGGCATGGGAAATGGTCCTGATCACTGCGAGAGAG
AAAGCAAGACAACTGCCATCAGCTCTCCCACAGTGGGTTGTCTTCAGTAACCGACAGGAA
GGCTCCACCCACCTTCCACTAGTTTGTTCTTTTTAGAATCTCTATATGGCACGTGTATTT
CTTTAAAGTAACTAGGCTTCACAAATCATCATTTTAAAAAATCCATACGTTGACATAACT
GTGCCATAGAAACTACCTCCACTAGGAACTCAGGTGAGTCCTGATGCCTAGTCATCCCAG
TTCACCCTCCACCTTTCCAGAAACTCCACAAAAAACCAACAAGCACCACACCTAACACCA
CCAGGAATGTGCTAGCCCAGCCATGCGTACCAAGTGAGTCATCGCCAGGCGTGAAATGGC
TAGCAGGTGTGCCAAACCCTGCCTTAGAGGACACCACAGGAGGCAGAAGTAAGACAATGA
CACCCCACAGGGCCAGAGTGGGAAGGAAAGGGCCACCTTACAGGGTCATCTGGACCAGGT
CACTGAGAACCACTTCTGAGGACAATCTGTANACACAGTGAGGCGTTATCCTTCTGNGTT
CCTGAGTTTAACTTTTCCTGTGCTGCTTATCAGCCCTGTGTCTGGCTGGCTCGCTTCCTG
TCTCTAGGCCCACTTCCTTACATGGAGATGGGAACGAGAAAATCTACCATCCCAGACTGC
TCATATGGAAGACATGAAACCATGTATANAGGCACCTGAGACAACAAGGCAGGTGCTTTG
CAGCCATTGCCATTAAGATATTTTGATATATTTACTAGAAATCAACAAACAGAACTATGT
CAAATTAGACACCATTTATTGCTAAATTCTAATACAAATAAGGAAGAACAATTACCAGTG
TTTTTAAAAGATTAGAAACAAAGATTAACACTCAAATATTTCTATTCTCATTCTTACTTC
TCTTATGTTGTGAGGTCCAACAATGCAGACTTAGGCTGTTTTTCTACAGAAACAAAATAA
AACAACAAAAATCCAACCATTCCCTATACATATGCATGTCATATCCAAGTTTCCAGTCAG
GCTTGTCTCCAGGTCTTCTTTCTGTGACCCATGCCTGCTCTATGTCCACTAGAAGCCCCA
AGTGTCCACCTGCCTCCCAGGCCTACAAGGGCCTCATCTCTCTTTTCCATACTCTTCCTC
AGGGTCCTGACATTGATTCTGGGTCCTCACTGACAGGACTCCTAATACCCTTTCCACAGA
GGAATAGGTTCTCTCTCCAGGCACAGCCTTGACACCAGTATCTCCATAGGAAAAGCACAG
TCTTTCTCATACCTCCTTGCTACCCTCCCTCATCAGGCTGTTTTTTTTCCCCTTCTCCTC
TTTGTTTTTCTCTGTATCCATCCTGAATGGTTTGGGAGCATGCCAATTGAGTATATTCAC
AAAGAGAATAAAGGTGAGATATCTGGTTGAATACAGAANTAATTTGAAATGAGAAAACTG
GGCTCAGGTCCCTGCAATGCCACACTGGAGCAAGCTCATTGGAATAGCTGCTTACCTCCT
CTCAGTCTCAAGTTCACCATCTGCAGTATGAGCAGCACGACTGTCTCCTGGCATGACTAT
ACAGTGTGTGTGTGTAAGATGCAAGCATACAGTGACAACTGCTGGGAAGAAGGAGATCCC
TGTCCCCAATGTCAGCCCGTCTGGGGCCCCAATTCCAGAAACCCACAGGTCTGTAGTAAA
CANAGATCTTACCTGTTTTCCAGGTCCCATCACAAAAACTCCTCCGAGGATGAAGCCTTC
CCCTTCCAGGTTTCCAGAGAAGCCTCCATTCCAGGCCCGGAAGGAGTTGTACCACACACC
CAAACGGATGAGGCCCATGAACATCATCTTCCTCCTCTCAGGACCATAGAATTTTTTCTA
TGAAGCAAGGAAGATCCTGTGTGAGTAGNCTGCAGGTCTTTCATCCCTAGGAAGGATGCC
AAAAGCCAAAAGCCCCAGAGCCTGCTACTTCATGTTCTTTCTTCAGCCTAACACATTACT
CCACTCAGGGTCACACTCAACTGCCTAGGGAAATAAAAATCTGCCAGCTCTGACTTCTTA
AAAAAAAGAAAGGAAGGAAGGAAGAAAGAAGAAAGAAAAAGACTTTTATTTTATTTTATT
ATTTTATATTATTTTTGTGATACAGAGATTGAACCCAGGGTCTTGCACATGATGGGCAAG
TGGTCTACCACTGACATCACCTTCAGGTCTCAAGGTAGTTCCAACCTGCCTCCACTGTCT
CACTCTCCTTACAAAATTGTGCAGGGGAAGAGAAGGGAGACACAGCTGCATAAATTAAGG
GGTAGGGGGTTTCCTGTGATTTCCCACCTCCTGGGTCAATCAATAAGAAAGGCTTTAGTA
ATAACGGCAAACAACTTTCAAGAGTCTGCCTGTGCTGTGCTCAGAGGGCTGGGGGACTCC
TCAAGTTCAGGAAAACTGAAGGGGAGGCCCTCCTCCAGCTCCCGGCCAGCCTAGGTCAGT
GACCTCTCCCAGTTAAGTACCATACCTACAAGCCTAGGGCCCACAAGCCCACAACCACTT
TTTCTTTCTGTATTTTGTTTTTAATTATGTGTATATGTGCATTTGTGTGTGAGTCTGTGC
ATGTGAGTGTTCACAGAGGCCAGAAGAGGGCATTGGATCCCTTGGAGCTGGTGCTGCAGG
CTGTGGTCTGCCACTCAACACGGCTGCTGGAAACTGAATGAGGGGCAATGGAATAATAGG
AAGGACTCTTAAGCACTGAGGTATCTCTCCAGCCACAATACACTCACCTTTTCATCCAGG
AAGATTTCCCCTTTGAAGTAAGGCTGGAAGTCCTTCACTTCTGACCCAACCTGCTCTTTG
ACCACAGCATAGAGAGGGACGCCTAGTTCATCCAACTTGGGCTTCAGGGAGGACAAGTCT
GCTGCCTCCTATAGAAGACAGGAAGGTCCAGGGACATAAGCACTTGAAGCTGTGCTGTTA
AAAAACAAAAACAAACCATGGCCCAGGGCATGTCTGACACTGAGCAGAGGAAAAAGGTGA
CAAAATCGCAGAAACAAGTCGGGCCTTGTAGCCCAGCCATGTGTCTGTCCTAGTTAGACA
CTAGACCTCAGGGTTTCAGGTGGATTCCTAGCCCAGGTTTCTTATCTTTTCAAAGTGGGA
AAGAGAAATATGCCCAGGGAGCCTCTGTAACAGTGGCTGCTCCCAAACGTGCCTTACATG
CTCAGCTATGACAAGTTTTTCTACCTCGTCTCCAGCCCATTCCTGCACTAGACCATACTA
GCCCAAGGGTCCATCAGACACATGCATGCAGGCCATGTGATTGTAGCCTCTAGGCTTCTG
TGCAAGCCCCGCCCCCACCATCCCTGTTAGAAACTTCCTTCTCTTTCCAGCTCTAATCTA
ACCTACTGGAAAGGTATCCTTGTTCTAGAAAGATCTCCTGGATCTGTCCTACTTCTCAAG
CATGTTCTCTGCCTTCTGCTTGTGGCTTTTTTGTGCTAAACCTTCATGTCATCATCAAGC
ACTGTCACTTAGATTCTTAAACATGTCTCCCTGTTAGACATTCTGTCTTTTGTTTCATAG
ACAATTCAGTGCCTAGAACATGGCTGGAGGTTCGAAGGTACTGAACACTCAGCGGAAAGA
GCTNAAGATGGAAAGGGGAAGATGTGGAAGAGTTGAGTTGGTACAGACACCTTTGACCCT
CGTGAACCATGTGCTGGAAGAATAAACAATACCGCATAAATCATGGGAAAGCTTTGACCT
GAAGAAATACTTCCGTTTTCACAGTAGATGTTGCAATNAAAAAAAATCATCAGAAAGNTA
TTTTAAATGTAGTCTGCCTACCTCTGATACAAATACAGTGTGACATGATAGCAACTATAT
TTTCTATAACAACAAAAAGGAAGAAAGAAAAGCATAGCTAGACAAAACAGGATTGATTAC
AACATATTTATCAAGAACTCTACTGAGTAGCAAATTTTGACTGGAGCAGAAGGGAGGGGC
TATTGTGTCTGATGTGGTTAAAGACCACCTGTTGGANATTCGGTTCACTGCTTTCTTGGG
CTCTGGGTATGTCAACATATAAAGCCATCAAGAGGAAACAGAGTCATATAACTCCTGCCC
ATGAGTCTGTTGAGTCACTC
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