SelenoDB
Release 2.0
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Promoter Report for SPR00003541_2.0
Identity
PromoterSelenoprotein U (SelU)
SpeciesNeotoma lepida (Desert woodrat)
Promoter IDSPR00003541
Promoter release2.0
External IDNone
Transcript SPT00003474_2.0
Annotation
Prediction method(s)
Promoter prediction (5000bp upstream, N/A) [Report annotation error]
OrientationForward
Structure gene structure

FeatureCol PromoterCol Coding exonCol Non coding exon (UTR)Col IntronCol SECIS
ResidueCol SecCol Cys or Other

Toolbox
Sequence
>SPR00003541_2.0 # Promoter # Selenoprotein U (SelU) # Desert woodrat (Neotoma lepida) Full length # Forward
CCTCTGTGTGTTTGTTTGGGACCAAAGAGCTGCAGGACACAGGAAAATTTCCATCTACAT
TATTACAAATACAATTGTCTATGGATGGTATCTTATTTTTTTTAACCTGGCTGTATTATT
ACTAACACTTAGTTACCTACATAAGTAACTTATTTAAAAAGTGCTACTCAAAGTGCATAT
GTACAGCCCTGGCTTCTATCCTCAGCACACCTATCACAGGTATGATTTCAGCACTTGGAA
GGTAGAAGCAGGAGGGTCACAAGTTCAAAGTCATACTTGGCTTCATAGCAAGTTCAAGAC
TAGCCTGAACTACATAAGACCCTGTCATAAACAAAACAATCAAACAAACAAAAGCACTAC
GTAATTCTTTTTAGAACTTCTGTGTAATAAGTCAACAAGCCAGAGAGTGTCATTCCTATG
ATTTGCTAAGACCCCTATGCCAAGAGCAGCACCCAAGGATTTAAAATGCAGTTCAGTTGG
TAGAGTGCTTGCTTAGCATGAATGAAGCCCTGGGTTCCATACTGAGCACCAGAGAAACAA
AGTGTGTTAGCACACATCTCGTAATGCCAGCACTCAGAGTGAAGACAGAGGGAACAGAAG
TCCAAGGTCATCCTCAGCTATATAACAAGTTGGAAGCCAACCTGGGCTACAGCTCCAGTC
TCAACAAAACAAAAGCAAAAACAAAAATGAAAACATGATCATCATTAATGGTTAAATAAG
CATTTAAAAGACAATGGAGGGGGGACAAGAGCCGGTTAAGGGCACTGGTTGCTCTTGCAA
AGGACCTGAGTTCAATTCCCAGTACCCACATGGTGACTTACAACCATCCATAATTCCAGT
TCCAGTGCATCTGACACTCTCTTCTGACATCTGAAGATACCAGGTACACACGTGGTACAC
ATACATACATGGAAGTAAAACATTTATAAGATAATGTAAATAAATCTCTTTTAAATTTTT
TAAAAAGAAAATAAAGGAATATCATGAATAACTCTATGCCCACAAATTTTTGATTACACA
GAAAGACTCAATTCAGAGAAAGAGACACTGAAATTCCTACAAGGAGAGATAGACGGTCTG
ATTGGGCCTAAAGCTGCTAAAGAAGTTGAATCAATAACTAATCACCCTCCAAACAGAAAG
ATGCAGGTGAAGATGGGTTCACAGATGAGTTATGAACATTTGAAGATGCAATCATACCAT
ACCAATTTTCTACAGTCCACTCCAAAAAAATAAAGCAGAGCAAACACTTTCTAACTCAGT
GTGAGGCTGACAGTGTCTTGATGTTCAAAACCAGATAAACACATTAGAAGGCAAGGACAC
TACTAGCCAGTATTTCTCAGGAGCATAGATGCAAACATCCTCCACAGGCTATTAGCAAAT
TGATACCAACTGTACATTTTTTAAAGGTTTAGAACACGACAGTTTTGAGATGAAAAGCAT
GTACCACAAAACCCCATGTACATAGTGCCTGTGAGCAAACCCAGGGCCTTGTGCAATGCT
AGGCAAGTGCTCAACCATCTGGTCTACTCTCCCAAGCCTTCATTTCTGATTTGTCATTTA
TATTCTTTCTTTTCTTAGTCTGGATTAAGGAATTTAAGAGTATTTTTACTATAAAACACT
ATGTGTGTGTTTGCAAAGGTTTCTTCATTTGCCGTGGTTGCTGCTTCATGCTCAGATGCC
CTGGAACCTGTGGGGCTGGCCTTTGAGAGGATGTTTGAGCTGTACCTCAACATTTACTCT
CTGAGGCATTATTTCTCTTCTTTCCTCTAAACCATGGTACTGAGGCTAATTTTTCTACTA
TCTTGCAGTGACCTTGTGCACTTTGAACTGATGAGAGCTTTGTTTTTGTGACCTTGGGAG
TCTGACAAAGCTACACAAACATGTCCCTGAGAACTGGAATGGTAACACATCCATGTATGT
CTCCAGTCTCAAAAGCAAAAAAGAAAAATAAATCAAATGAATCAAAATCAAAGTGGCCTG
CCTGCCACCAGCTGCAACACTCAGGAGAGCAGGCCCTGTACCTCGCCTAGGCAACACATA
GAGCCAATCCTGTTGCAGGAAGTGTGGTTGAGCCAGCCACAAAGCTGTGAGCATGTGAGA
GCTGTCCCCATTACTCACGTCATGTGGTGGCATGGGCTGGAAAGAGATGTCCCATTTCCA
CCCCCTCTCCACTCCCCCGCTGAGTGGAGGTGAGAGAACTGGCCCTGAGGTCACAGGAGT
GGGAGAGCCAGCCCTGCCCCTCACCTGCTACAGCACTTGGGAGAATGGCCCTGAAGGTGT
AGAAGTAGGAGATCTGACCCTGAGGACATGAAAGCAGGAGAACTGGCCCCGCCCCTTGCT
CATTACTGCAAAGGGTGAACTTGCTGAGGCAATGCAGGAGAGCTTACCCTGGTGGTGAGG
ACAAGGTAGAGCTGGCAGGCTGACCAACCCTGCAACTAACCAGGCCCAGAACCAGAGTTA
TGAGTTNGCCCACCCCAATATCCAGCCCATCTGTGATCTACTGGAGCATGTGAAGGGACC
AGTCCTGCACACCCAAAGCTGCAGGATTTCCACAACACAGGGCAACAGCAGGATAACTAA
GAGGAGTACCAGTGAGGACCCAGCATTGATAGTGTAGCAGAAACCAGAGGCCTCGACATA
TGGACAAAAGGGTTTACTGCATGACTCACTATATCACACTACGGCTTCCATGAGCCATCT
CTTTTCCACTGACTCTTCATTCAAGGCAAAGCTGCTGCATAAAGTTAGTCCAGCAAGTGT
CTTAAAGAATTTAAATATTTATTGGTAACATATAGTTCATGTATTTATTTGAAAATAGCC
TTATAAGATTTGTAGAGGAATACATTTCAGCAATATTATAATGATTTCATTGATCTGATC
ACACTGAATTAGAACAATATAATGCCTTTCCAGCATAGTAAAATCTGAGCTTATTGGTGG
GATGTGGATAAATTTTAATGTCCGAATCCCAAAGCTTACACACAGAGATCACATCACACC
ACTAGTATGCGATCATTGGCACAGCTGAATGTCGACAAGCATGAAGTCCTTTATCCCCTC
ACTTCCTACGTTCTCCTCCGAGGGTCAAAATAATCTCTCCAGTCTCAGTCATAGTACTTG
ATCATATCATGCTGTTTTTAAAATACTTTTCCCAAAATTGTTTAACAATTTCACTAGCTA
CTCACAACTTCATAGCGAAATTAATATCCCTATTCTGACTCTTGAGGAAAATTAAGGCTC
AAAGATTATAAACAAATTTTCCAAGGATCACAGAGATAATTAAAACTCCTAACCCTCTGA
CTAGTTATTTTCTGGAGTTTCCACAACTTCATGTCTTCCTCTACCCTTTAATGTGATTAG
CAGTGAGACATAGTAAAAAATACTTCTCTACTGGGAATCAAAGCATATAGGAGGAATTTA
CAGATTGGCTGCCTCGACTGATTCATTTTAAATCGAATTTATGTATTTTTCAATTCTCTT
ACCTATCTTTGTAATCCCTAATAGTGTTTTGTTTTCCTAACAAGAGCATCAATCACCTTA
AGCAGAATTAGTCAAATTCATAAACATAAATGGCATGTTTTCATTAAAATGTAAAACTGT
AAAAAGTTTTTTGAATGTTTAGCAGGTAAAGGCACTTGCCACCAAGAGTGACCCCTGAGT
TCTATCCTCGGGATCCATATAGTGAAGAAGAAAATGGACTCCCACAAATTGTCCTTTAAC
ATCCACACACATATAGAAAAGAAAAACAGGAAATACCTTTCTAAAAATTTTAATGAAAAT
GAAAGTAGGAAGGGGACTATTGGAGATAAGATGGTAATGGGGTAAACAAAATCGAACTAC
ATCAGAAGCATGTATGAAACATGATAAACTCATTTCTCAAAATCAATATAAGCTTCAAAA
GCCTCTTACTAGCTTAATTTGTACATATTTGCATTTCTATGAAGTTCACAGGTTTTATGA
AACCAAGAAAAGTAATAAATACAGTAGGTAACAGACAGAAGAGAATAACAGGCTCTTTGA
GCTGGCAATGATGCAGTAATGTATTAGATGCAAGTAACTGAGCTTAAGGGTTAAACACAG
AAAGTTTCAAATATGGCAGCTGAATTTTAATCTATGTATGCAGGATTTATATGAGAATAG
GTCCTATCTCTGGCTTTCATTTTCACAAGTAATGAAGAGTTTGATCAAAAGTACCAGATA
AACGAGATAATGGCCAACTATAACTTAACAGTTCCTTAAAATAACCAATAAATATGAGTA
TTTTACTGCCAAATTATGTTGAGAAAAACAGTAAATGTCATTTATTACATTGGTTCTTAA
ATGCTTCAACAAAATTGATTTAAAATGAAACACTGAACATGCTAGTTTGTCACCTCTGTG
ACTGTATTTCATTAATTTATGTGCTATAGTCATATAACCATCACACATGAACTTACATCA
CTCGATACTTCTCCAAAGTAGTGAAGCCACATGGAATTTTCATGACAACGTATCTATCTG
CCTGTGGCCCATTTGACACATAAAAGATTTTTTTATTTTCACATAGACAAATCTCTTTTT
TCCTTTGTAGCTTCAAGCTTTTTGGACTTGATAATGAGCATTTAATGAACCTGACCTACC
CTCTTGATTTCTAACATGAGTGAACAATCCAGGGCTTTAAACTTTACAATGTAGAAATGG
TTTATACACATAGACATGAAAACCTAACTTTAAAAAANNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNN
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