SelenoDB
Release 2.0
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Promoter Report for SPR00003542_2.0
Identity
PromoterSelenoprotein U (SelU)
SpeciesNeotoma lepida (Desert woodrat)
Promoter IDSPR00003542
Promoter release2.0
External IDNone
Transcript SPT00003475_2.0
Annotation
Prediction method(s)
Promoter prediction (5000bp upstream, N/A) [Report annotation error]
OrientationForward
Structure gene structure

FeatureCol PromoterCol Coding exonCol Non coding exon (UTR)Col IntronCol SECIS
ResidueCol SecCol Cys or Other

Toolbox
Sequence
>SPR00003542_2.0 # Promoter # Selenoprotein U (SelU) # Desert woodrat (Neotoma lepida) Full length # Forward
TATCTAGGCATAATATTGAAATTCATTAAAACCCATGACGAGGAGAGAGCGTTGAATACA
TTCAGAAGAAAAAAGGAATACCAGATCCCAAGGAGCGCCCTAGTGTTCCGTTGTGAACTA
TCACAGGATGAAATGGAAAAAAAGTAAGGATTTATTGTGTCTGGGTTCTTATGCAATAGT
AAGTACTATAATGTTTGAAAGCAGATTATCATTAACTAAAGATGTGCATTTACCCCCTAG
GGGATACTAAAAAGCAACCCACAAATGAAAAGGGAATACTTAATAAAGTTCTAAAAGAAA
ATTATAAAAAGCACTCAAACATCAACAACAAGAAACAAAAAAGACAGATGGAACAAATAA
ACTCACCTTTATTGTAAAGATACCACTTAAAAGGATGGAGAAAAATATAATGTTCAAAAC
CAATCAAAACAAAGCCAGGACACCTGTAGCAACACAAAGTCTGTTTCAGAACAAGAGACA
TTATCAAGGATTAAAAAGAACATAATAATAATAATGGGCTCATTTCTGAAACAAACGAAC
AAAACCCACAACTAATGAAGTAGTAAACACATCCCCCAACACAAGCTTCCTCAGATGAGG
TAGACGAGCTGGAATGGAAGACAAAACCAGGTTAGACTCTTCAGCTCACCTCTTTCAGCA
ACCAATAGAAGAGGCACAAAGTCGGCTTCTCTGGCTGAAGATGCCTTGTAAAGATGGACC
AGCAGGTGTAGAAACACTGGAAGATTATTTTTTGTTTTGTTTCATTGTTCTGCAAATACA
GAACGTTCATCACACTATACCATGTTCTAGGCACAAAACAAATTTCAACAAACTCAAGAG
AATAGAAGCTGTATAATGTGTGTTCTCTAGTAGCAGAATTAAAGAGATGTCACAAGTGGG
AAGTTATTTGGACAACCCTTCAATTATTTAGAAATTAAACCACTATATTTCATAAATATT
CTTGACAAACAGAAAAGAAAAAGACAACATATCAAAACTCGGGGGTATAGATAGAGTGCT
ACTTAGGGAAGAAAAACAGGCTCTCAAACCAGTGACCCAAGCTTCCATCTTTGGTGGATA
GAAAAATAACAAAACCAAAACTGAAGTACACCCAAGTTATACACACACTGATGGAAGAAA
CAACAAATATTTTTTAAAAAACCCAATGAAATAGAAAAATTTAAAAATAATTGAAACAAA
AAGTTTAAGAAGATTGATAAAAATTGATATACCTCTAGCCAGCGTGACCAAGAATACAAG
GAAAAGGTCAGAAATTGCTAATATCAAAGACAATATCTTCTCATAATCCCCTGACATTAA
CAAGATAGTATGGCTGTGTGGTGAACAAACTCTATGCTTATATATTTGACAACTTAGAAG
AAATGGACCTTCTGAGAGACTCAGAGTACCAAAACCCACAAAACAAAACAAAAACAACCA
AATAGATATCTGAAAAATTCTATATCCATGAAAGAAATTTAATTTATACTTTAAAAGCGC
CTCCCAGGGCCTTAGAGGGTAGCTTGGTTGGTAGAGTGCTCAACATTTAAAACCCTGCCA
TCAACCAGCACCGCAGAAAACCGGGGGCGGTGGTGGATGTTTCCTGTACTTGGAGGTGGA
GGCAGGAAGATCTTCTTGGATACACATAGGGAGTTCAAAGCCATCCTATGAACTCCCTAT
GGGGTACACGAGATCCATACAAAAAGGCAAGGAAAAAACAAAAAACAAAAATCAAAACAA
GATATAGAAAGATCATTAGGCTTATAGCAGTTTCAATGTTTCCCCTTCTGAGTTCTACCA
AACACTGAAGAACACGTGCAACAAAGAAATCTAACACAACTGAGTCAGAAATAGGAGAGA
AGGAAACTTTACAGTTCCTGTTGAGACCAGCATTGCCCTCATTTTAAAGCCAGATACGCT
GAGCACCGGGTGACACACACTTATGGTCAGTCCCGGGTGACACACACTTATGGTCAGTCC
TAGCTACCCAGAAGGCTAAGGCAGGAGGATTGCTTCATTGTAACAGTTCACGTTCAGTCC
GAGCAACGTGGTGAACTCAGTCACCTCCTAACCCAATCCATACCCTCAGACAGGCTCTCA
TGGTATAGCCCAGACTGGCCGCAAAGTCACAATCCTCCTGTTTTGGCCTTTTGAATGTTG
GGATTCTTGAAGCCAGCATTTTAAGAAAAGCAAAGCAAAAAAAAAGAGAAAAAAAACTAC
AAATTCCCCTCATGCATATTGATGAGGGAAAAAAAATCCTCACTAAAACATTAGCATATT
AAATATAGAGTGTATGAAAGTACAATGTACAATACACCATGATTAAATAGCTGTGACGTA
AGCAATGGAAGATTTGTTCAACTTTAAAAGACTATTGAAATACACTAGTATGTCAGCAGA
TTAAAGATTAGGATCTGGGCCTGACAGTAGACATAGGAAGATCCTCCCAAACAAAGTGCG
TTCAAGGCCAGCCTGGGCTACACAAGACCCTGACTCAAACAACAATAAGGGTAACAACAA
AAATAGGTTCAGCCTGGAGGTGGTGGCACATTCCTTTAATCCCAGCACTCAAGAAGCAGA
GGTAGGTGGATCTCTGTGAGTTCGAGGCCAGCCTGGTCTACAGAATGAGTTCCAGGACAG
TCAGGGCTACACAGAGAAATCTTGTCTCGAAAAAAAAAAGAAAAAAACAAAACAATGATG
GAAAAAATAGGTGCAGAAAGGCACTGGACAAGTTTCCGTGTGCATGTGTGATTATTTTTT
TAAAATTATCTTAGTAAATAATCTCACTTGACTTAAAAAAGAGATAAAAAAGGCCTATCT
AGCTCACATAAAACTTAATATTAAGTGACTGAATACCTTTTTTCTCCCAAGTGGTGAATA
TTATATGGATATGTTTTGCTATTACCCTGGAAATTCTAGTAAGTCATTATAATAAGACAA
AATATAGAAATAAATATCTCTACACATGAATAACATAACTATCATAAATAACATAACTAT
CTACATAAACATTCCTAAGCAACCTACACAGAAGCTCTGAGAACGGATAACTAAGTCTAA
TAAAGTCTCAGAGTACAGTCAATTCACACAAATCAACGGTACTTCTATACACTAGAACTG
AGCAATTAGAATTCAAAATCTGAAAAACAATACCATAACAATAGTGTTCAGGTACATGCT
CGCATACTTGCTCTTGAGAACACACACACCCACACACACCCACTCACACACCTTGGGGGT
TAGGGAAATCATGTGGGATCTGTGAGCTGGAAAGTACAGAACACTGAAGANNNNNNNNNN
AAAAACTAAGAAGAGCCAAACAAGTGGAGAGAGATATAGTGTTTGTAGACTGAAAGACTC
AGTATTGTTACAACGTTAATTCTGAGTGATGGTGTTTGTAGACTGGAAGATTCAATATTG
TTACGATGTTAATTCTTCCAAATTGATTGTGTTGATTCAGGGACATTCCAATCACAATTC
CAGCTTTTTATTATAAGATATTTATTTTTTATTTATTTGTGCGTGTGTGGGATGGACATG
TGCTATGGTATACATGTGGAAGTCAGAACACAGCTTGCTGGATTCGGTTCACCCTCTCTG
CGGTGAGAGTCCCAGGGACTGGACTCAGTTGGCCAGGCTCAGGCGCAAGTGCCTTTATCT
GATGCTGANGAGCCATCATACTGGCACTCAGCAGCTTCTTGTGTAGCTGTTATTGACAGC
TGGTTTAAATTTTATGTACGGAGGTAAAGGATAGAACATTACTAAAACAAATACTTGAAA
ACTCATACTATCTCATTTAAAAATTTTTTATTTTATTTGTGTGTGTAAACCCTGGGAGGC
CAGAAGAAGACACTGGACTCCCTGGAGCTGGAGTTACAAGTGATGGCTACCCAATGTTGG
GCCTTCTGAACTCGGGTCTTCTGAAAGAGCAGCAAGCACCCTTAACCACTGAGCTATCTT
TCCAATGTCGCCTATTGCCCAATTTTAAGCATTACTGTAATGCTACAAGTAATAGATAAA
GGATAGACAAGAAATAAAACAGAAGAGAGAAACCAAAAATAAGCCCACACGAACATAGTT
GATTAAAAAAAAANTTATTTTTTGGTTAACTGACTTTTGACAGTGAAGCAAATGTGATTT
GGTACAGAGAGGTGAATCCCTGCAAACAAATGCTGGTGGAATAATTGAGTGTGCATGTCT
TTGCCCACTTGTGCTACTATAACAAAGTATCCCAGAATAGGTGGGTTATAAACAACTGAC
ACTTAGTGGTCACGGTTCTGGAGGCCGGGAAGAGCAAGCTGCTCGTGGAGTTAGTATCTG
GTGAAGGAACCCTTCCTTCCTAGGTCCTGAGATGGTCATCTTCTCACTATTGTTTGACAC
CGCACGGTGGAAGGCCAAGAAGCTTCCTAGGGTTCCCTTATTTTTTCATAATATTTTTAT
TGATTATTTGGGAATTTTACATCATGAACCCTGATCACACTCACTTCCCAGGTCTACCCC
CCATGCTTGTTACCTCCCCCCTCATAAAAAGAAGAGGAAGAGGCAGAAGAAGGAGAAGAA
GAAGGTGGTAGTTTAATATGTGTTATCCATGTACTCACTGGAGCATGGTCAAACTCCCAG
TGGCCAGCTCCTTAAAGATAACTGAGTCCTTCCTCACCTGCACCGCTGCCAGAAGCCGTC
ATCTGTGAAGAGCTACACTTCAGCATCCTTATCACAACTTTTTTTTTGAGACAGGGTTTG
AGCCCTGGCTATTCTGGAACTCTCTCTGTAGACTGCCTGCCTCTGCCTCCCAAGTGCTGG
GATTAAAGGTATGTGCTAGTACCACCCAGCTCCTTACCACATTTTTTAAGAGTTGTCTTC
GATGGCTTTCTGTCTAGGCTGTTACTTTGGAGGGGGGTGCTGGGGGTTGGGGGTTGTTAC
AGAAGCCTTCTGTATCTCTCTTTTTCAACTGTGAGTCTGCAGTCATCAATATCATGGCAA
CAGTAGCTTCCTTGCCCTTT
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